Skip to content

HTTPS clone URL

Subversion checkout URL

You can clone with
or
.
Download ZIP
Browse files

* fixed apocrine sweat gland to be NOT an apocrine gland

    * cleared up sebaceous gland confusion
    * NTs: synovial bura, navicular bursa, mesosalpinx, broad ligament of uterus
  • Loading branch information...
commit 1d2ea31b73533d316a2e09be5fce3eeb3533e7c8 1 parent 40dd25d
@cmungall cmungall authored
Showing with 1,296 additions and 401 deletions.
  1. +1 −1  Makefile
  2. +1 −1  bridge/cl-bridge-to-aao.obo
  3. +1 −1  bridge/cl-bridge-to-aao.owl
  4. +1 −1  bridge/cl-bridge-to-bila.obo
  5. +1 −1  bridge/cl-bridge-to-bila.owl
  6. +1 −1  bridge/cl-bridge-to-bspo.obo
  7. +1 −1  bridge/cl-bridge-to-bspo.owl
  8. +1 −1  bridge/cl-bridge-to-caro.obo
  9. +1 −1  bridge/cl-bridge-to-caro.owl
  10. +1 −1  bridge/cl-bridge-to-ehdaa.obo
  11. +1 −1  bridge/cl-bridge-to-ehdaa.owl
  12. +1 −1  bridge/cl-bridge-to-ehdaa2.obo
  13. +1 −1  bridge/cl-bridge-to-ehdaa2.owl
  14. +1 −1  bridge/cl-bridge-to-emapa.obo
  15. +1 −1  bridge/cl-bridge-to-emapa.owl
  16. +1 −1  bridge/cl-bridge-to-fbbt.obo
  17. +1 −1  bridge/cl-bridge-to-fbbt.owl
  18. +1 −1  bridge/cl-bridge-to-fma.obo
  19. +1 −1  bridge/cl-bridge-to-fma.owl
  20. +1 −1  bridge/cl-bridge-to-go.obo
  21. +1 −1  bridge/cl-bridge-to-go.owl
  22. +1 −1  bridge/cl-bridge-to-hao.obo
  23. +1 −1  bridge/cl-bridge-to-hao.owl
  24. +1 −1  bridge/cl-bridge-to-kupo.obo
  25. +1 −1  bridge/cl-bridge-to-kupo.owl
  26. +1 −1  bridge/cl-bridge-to-ma.obo
  27. +1 −1  bridge/cl-bridge-to-ma.owl
  28. +1 −1  bridge/cl-bridge-to-mfo.obo
  29. +1 −1  bridge/cl-bridge-to-mfo.owl
  30. +1 −1  bridge/cl-bridge-to-ncithesaurus.obo
  31. +1 −1  bridge/cl-bridge-to-ncithesaurus.owl
  32. +1 −1  bridge/cl-bridge-to-nif_grossanatomy.obo
  33. +1 −1  bridge/cl-bridge-to-nif_grossanatomy.owl
  34. +1 −1  bridge/cl-bridge-to-og.obo
  35. +1 −1  bridge/cl-bridge-to-og.owl
  36. +1 −1  bridge/cl-bridge-to-spd.obo
  37. +1 −1  bridge/cl-bridge-to-spd.owl
  38. +1 −1  bridge/cl-bridge-to-tads.obo
  39. +1 −1  bridge/cl-bridge-to-tads.owl
  40. +1 −1  bridge/cl-bridge-to-tao.obo
  41. +1 −1  bridge/cl-bridge-to-tao.owl
  42. +1 −1  bridge/cl-bridge-to-tgma.obo
  43. +1 −1  bridge/cl-bridge-to-tgma.owl
  44. +1 −1  bridge/cl-bridge-to-vsao.obo
  45. +1 −1  bridge/cl-bridge-to-vsao.owl
  46. +1 −1  bridge/cl-bridge-to-wbbt.obo
  47. +1 −1  bridge/cl-bridge-to-wbbt.owl
  48. +1 −1  bridge/cl-bridge-to-xao.obo
  49. +1 −1  bridge/cl-bridge-to-xao.owl
  50. +1 −1  bridge/cl-bridge-to-zfa.obo
  51. +1 −1  bridge/cl-bridge-to-zfa.owl
  52. +7 −7 bridge/uberon-bridge-to-aao.obo
  53. +1 −1  bridge/uberon-bridge-to-aao.owl
  54. +1 −1  bridge/uberon-bridge-to-bila.obo
  55. +1 −1  bridge/uberon-bridge-to-bila.owl
  56. +1 −1  bridge/uberon-bridge-to-caro.obo
  57. +1 −1  bridge/uberon-bridge-to-caro.owl
  58. +1 −1  bridge/uberon-bridge-to-ehdaa.obo
  59. +1 −1  bridge/uberon-bridge-to-ehdaa.owl
  60. +1 −1  bridge/uberon-bridge-to-ehdaa2.obo
  61. +1 −1  bridge/uberon-bridge-to-ehdaa2.owl
  62. +6 −6 bridge/uberon-bridge-to-emapa.obo
  63. +1 −1  bridge/uberon-bridge-to-emapa.owl
  64. +1 −1  bridge/uberon-bridge-to-fbbt.obo
  65. +1 −1  bridge/uberon-bridge-to-fbbt.owl
  66. +37 −7 bridge/uberon-bridge-to-fma.obo
  67. +131 −1 bridge/uberon-bridge-to-fma.owl
  68. +1 −1  bridge/uberon-bridge-to-go.obo
  69. +1 −1  bridge/uberon-bridge-to-go.owl
  70. +1 −1  bridge/uberon-bridge-to-hao.obo
  71. +1 −1  bridge/uberon-bridge-to-hao.owl
  72. +1 −1  bridge/uberon-bridge-to-ma.obo
  73. +1 −1  bridge/uberon-bridge-to-ma.owl
  74. +1 −1  bridge/uberon-bridge-to-mfo.obo
  75. +1 −1  bridge/uberon-bridge-to-mfo.owl
  76. +28 −13 bridge/uberon-bridge-to-ncithesaurus.obo
  77. +53 −13 bridge/uberon-bridge-to-ncithesaurus.owl
  78. +1 −1  bridge/uberon-bridge-to-nif_grossanatomy.obo
  79. +1 −1  bridge/uberon-bridge-to-nif_grossanatomy.owl
  80. +1 −1  bridge/uberon-bridge-to-og.obo
  81. +1 −1  bridge/uberon-bridge-to-og.owl
  82. +1 −1  bridge/uberon-bridge-to-spd.obo
  83. +1 −1  bridge/uberon-bridge-to-spd.owl
  84. +1 −1  bridge/uberon-bridge-to-tads.obo
  85. +1 −1  bridge/uberon-bridge-to-tads.owl
  86. +1 −1  bridge/uberon-bridge-to-tao.owl
  87. +1 −1  bridge/uberon-bridge-to-tgma.obo
  88. +1 −1  bridge/uberon-bridge-to-tgma.owl
  89. +1 −1  bridge/uberon-bridge-to-wbbt.obo
  90. +1 −1  bridge/uberon-bridge-to-wbbt.owl
  91. +1 −1  bridge/uberon-bridge-to-xao.obo
  92. +1 −1  bridge/uberon-bridge-to-xao.owl
  93. +7 −7 bridge/uberon-bridge-to-zfa.obo
  94. +1 −1  bridge/uberon-bridge-to-zfa.owl
  95. +160 −52 uberon-simple.obo
  96. +176 −48 uberon-taxmod-amniote.obo
  97. +250 −52 uberon-with-isa.obo
  98. +175 −55 uberon.obo
  99. +179 −53 uberon_edit-implied.obo
View
2  Makefile
@@ -257,7 +257,7 @@ merged-nc.owl: uberon-cl.owl ncbi_taxon_slim.obo pr-core.owl
### owltools --catalog-xml $(CATALOG) $< $(GOEXT)/x-metazoan-anatomy.owl $(GOEXT)/x-cell.owl --merge-support-ontologies $(OBO)/ncbitaxon/subsets/taxslim.owl $(MCAT_ONTS) --mcat --prefix $(OBO)/UBERON_ --prefix $(OBO)/CL_ -n $(OBO)/uberon/merged.owl -o file://`pwd`/$@
# merged, reasoned over
merged.owl: merged-nc.owl
- owltools $< --assert-inferred-subclass-axioms --useIsInferred -o file://`pwd`/$@
+ owltools $< --assert-inferred-subclass-axioms --useIsInferred --add-ontology-annotation $(DC)/description "This ontology combines all of uberon and cl plus a subset of other ontologies such as GO into a single merged ontology " -o file://`pwd`/$@
.PRECIOUS: merged.owl
merged.obo: merged.owl
View
2  bridge/cl-bridge-to-aao.obo
@@ -1,5 +1,5 @@
ontology: uberon/bridge/cl-bridge-to-aao
-data-version: 2012-11-30
+data-version: 2012-12-02
property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/references/reference_0000026" xsd:anyURI
property_value: dc-title "CL bridge to aao" xsd:string
property_value: dc-description "Equivalence axioms between AAO and CL. Note that AAO is in the process of being merged into the core CL, so this mapping will become deprecated" xsd:string
View
2  bridge/cl-bridge-to-aao.owl
@@ -21,7 +21,7 @@
<rdfs:seeAlso rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://purl.obolibrary.org/obo/uberon/references/reference_0000026</rdfs:seeAlso>
<terms:references rdf:resource="http://purl.obolibrary.org/obo/aao.owl"/>
<terms:references rdf:resource="http://purl.obolibrary.org/obo/cl.owl"/>
- <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-aao/2012-11-30/uberon/bridge/cl-bridge-to-aao.owl"/>
+ <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-aao/2012-12-02/uberon/bridge/cl-bridge-to-aao.owl"/>
</owl:Ontology>
View
2  bridge/cl-bridge-to-bila.obo
@@ -1,5 +1,5 @@
ontology: uberon/bridge/cl-bridge-to-bila
-data-version: 2012-11-30
+data-version: 2012-12-02
property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/references/reference_0000026" xsd:anyURI
[Typedef]
View
2  bridge/cl-bridge-to-bila.owl
@@ -13,7 +13,7 @@
xmlns:doap="http://usefulinc.com/ns/doap#">
<owl:Ontology rdf:about="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-bila.owl">
<rdfs:seeAlso rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://purl.obolibrary.org/obo/uberon/references/reference_0000026</rdfs:seeAlso>
- <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-bila/2012-11-30/uberon/bridge/cl-bridge-to-bila.owl"/>
+ <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-bila/2012-12-02/uberon/bridge/cl-bridge-to-bila.owl"/>
</owl:Ontology>
View
2  bridge/cl-bridge-to-bspo.obo
@@ -1,5 +1,5 @@
ontology: uberon/bridge/cl-bridge-to-bspo
-data-version: 2012-11-30
+data-version: 2012-12-02
property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/references/reference_0000026" xsd:anyURI
[Typedef]
View
2  bridge/cl-bridge-to-bspo.owl
@@ -13,7 +13,7 @@
xmlns:doap="http://usefulinc.com/ns/doap#">
<owl:Ontology rdf:about="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-bspo.owl">
<rdfs:seeAlso rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://purl.obolibrary.org/obo/uberon/references/reference_0000026</rdfs:seeAlso>
- <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-bspo/2012-11-30/uberon/bridge/cl-bridge-to-bspo.owl"/>
+ <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-bspo/2012-12-02/uberon/bridge/cl-bridge-to-bspo.owl"/>
</owl:Ontology>
View
2  bridge/cl-bridge-to-caro.obo
@@ -1,5 +1,5 @@
ontology: uberon/bridge/cl-bridge-to-caro
-data-version: 2012-11-30
+data-version: 2012-12-02
property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/references/reference_0000026" xsd:anyURI
[Term]
View
2  bridge/cl-bridge-to-caro.owl
@@ -13,7 +13,7 @@
xmlns:doap="http://usefulinc.com/ns/doap#">
<owl:Ontology rdf:about="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-caro.owl">
<rdfs:seeAlso rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://purl.obolibrary.org/obo/uberon/references/reference_0000026</rdfs:seeAlso>
- <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-caro/2012-11-30/uberon/bridge/cl-bridge-to-caro.owl"/>
+ <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-caro/2012-12-02/uberon/bridge/cl-bridge-to-caro.owl"/>
</owl:Ontology>
View
2  bridge/cl-bridge-to-ehdaa.obo
@@ -1,5 +1,5 @@
ontology: uberon/bridge/cl-bridge-to-ehdaa
-data-version: 2012-11-30
+data-version: 2012-12-02
property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/references/reference_0000026" xsd:anyURI
[Typedef]
View
2  bridge/cl-bridge-to-ehdaa.owl
@@ -13,7 +13,7 @@
xmlns:doap="http://usefulinc.com/ns/doap#">
<owl:Ontology rdf:about="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-ehdaa.owl">
<rdfs:seeAlso rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://purl.obolibrary.org/obo/uberon/references/reference_0000026</rdfs:seeAlso>
- <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-ehdaa/2012-11-30/uberon/bridge/cl-bridge-to-ehdaa.owl"/>
+ <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-ehdaa/2012-12-02/uberon/bridge/cl-bridge-to-ehdaa.owl"/>
</owl:Ontology>
View
2  bridge/cl-bridge-to-ehdaa2.obo
@@ -1,5 +1,5 @@
ontology: uberon/bridge/cl-bridge-to-ehdaa2
-data-version: 2012-11-30
+data-version: 2012-12-02
property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/references/reference_0000026" xsd:anyURI
property_value: dc-title "CL bridge to ehdaa2" xsd:string
property_value: dc-description "Equivalence axioms between EHDAA2 and CL. EHDAA2 replaces EHDAA" xsd:string
View
2  bridge/cl-bridge-to-ehdaa2.owl
@@ -19,7 +19,7 @@
<rdfs:seeAlso rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://purl.obolibrary.org/obo/uberon/references/reference_0000026</rdfs:seeAlso>
<terms:references rdf:resource="http://purl.obolibrary.org/obo/cl.owl"/>
<terms:references rdf:resource="http://purl.obolibrary.org/obo/ehdaa2.owl"/>
- <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-ehdaa2/2012-11-30/uberon/bridge/cl-bridge-to-ehdaa2.owl"/>
+ <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-ehdaa2/2012-12-02/uberon/bridge/cl-bridge-to-ehdaa2.owl"/>
</owl:Ontology>
View
2  bridge/cl-bridge-to-emapa.obo
@@ -1,5 +1,5 @@
ontology: uberon/bridge/cl-bridge-to-emapa
-data-version: 2012-11-30
+data-version: 2012-12-02
property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/references/reference_0000026" xsd:anyURI
property_value: dc-title "CL bridge to emapa" xsd:string
property_value: dc-description "Taxonomic equivalence axioms between EMAPA (abstract developmental mouse) and CL" xsd:string
View
2  bridge/cl-bridge-to-emapa.owl
@@ -21,7 +21,7 @@
<dc:creator rdf:datatype="http://www.w3.org/2001/XMLSchema#string">vHOG editors</dc:creator>
<terms:references rdf:resource="http://purl.obolibrary.org/obo/cl.owl"/>
<terms:references rdf:resource="http://purl.obolibrary.org/obo/fma.owl"/>
- <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-emapa/2012-11-30/uberon/bridge/cl-bridge-to-emapa.owl"/>
+ <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-emapa/2012-12-02/uberon/bridge/cl-bridge-to-emapa.owl"/>
</owl:Ontology>
View
2  bridge/cl-bridge-to-fbbt.obo
@@ -1,5 +1,5 @@
ontology: uberon/bridge/cl-bridge-to-fbbt
-data-version: 2012-11-30
+data-version: 2012-12-02
property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/references/reference_0000026" xsd:anyURI
property_value: dc-title "CL bridge to fbbt" xsd:string
property_value: dc-description "Taxonomic equivalence axioms between the drosophila anatomy ontology and CL. Note that currently CL focuses on chordate anatomy so there are only a minimal set of equivalencies for high level classes. In future CL may bridge via the arthropod anatomy ontology" xsd:string
View
2  bridge/cl-bridge-to-fbbt.owl
@@ -19,7 +19,7 @@
<rdfs:seeAlso rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://purl.obolibrary.org/obo/uberon/references/reference_0000026</rdfs:seeAlso>
<terms:references rdf:resource="http://purl.obolibrary.org/obo/cl.owl"/>
<terms:references rdf:resource="http://purl.obolibrary.org/obo/fbbt.owl"/>
- <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-fbbt/2012-11-30/uberon/bridge/cl-bridge-to-fbbt.owl"/>
+ <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-fbbt/2012-12-02/uberon/bridge/cl-bridge-to-fbbt.owl"/>
</owl:Ontology>
View
2  bridge/cl-bridge-to-fma.obo
@@ -1,5 +1,5 @@
ontology: uberon/bridge/cl-bridge-to-fma
-data-version: 2012-11-30
+data-version: 2012-12-02
property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/references/reference_0000026" xsd:anyURI
property_value: dc-title "CL bridge to fma" xsd:string
property_value: dc-description "Taxonomic equivalence axioms between the FMA and CL" xsd:string
View
2  bridge/cl-bridge-to-fma.owl
@@ -20,7 +20,7 @@
<rdfs:seeAlso rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://purl.obolibrary.org/obo/uberon/references/reference_0000026</rdfs:seeAlso>
<terms:references rdf:resource="http://purl.obolibrary.org/obo/cl.owl"/>
<terms:references rdf:resource="http://purl.obolibrary.org/obo/fma.owl"/>
- <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-fma/2012-11-30/uberon/bridge/cl-bridge-to-fma.owl"/>
+ <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-fma/2012-12-02/uberon/bridge/cl-bridge-to-fma.owl"/>
</owl:Ontology>
View
2  bridge/cl-bridge-to-go.obo
@@ -1,5 +1,5 @@
ontology: uberon/bridge/cl-bridge-to-go
-data-version: 2012-11-30
+data-version: 2012-12-02
property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/references/reference_0000026" xsd:anyURI
[Term]
View
2  bridge/cl-bridge-to-go.owl
@@ -13,7 +13,7 @@
xmlns:doap="http://usefulinc.com/ns/doap#">
<owl:Ontology rdf:about="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-go.owl">
<rdfs:seeAlso rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://purl.obolibrary.org/obo/uberon/references/reference_0000026</rdfs:seeAlso>
- <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-go/2012-11-30/uberon/bridge/cl-bridge-to-go.owl"/>
+ <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-go/2012-12-02/uberon/bridge/cl-bridge-to-go.owl"/>
</owl:Ontology>
View
2  bridge/cl-bridge-to-hao.obo
@@ -1,5 +1,5 @@
ontology: uberon/bridge/cl-bridge-to-hao
-data-version: 2012-11-30
+data-version: 2012-12-02
property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/references/reference_0000026" xsd:anyURI
[Term]
View
2  bridge/cl-bridge-to-hao.owl
@@ -13,7 +13,7 @@
xmlns:doap="http://usefulinc.com/ns/doap#">
<owl:Ontology rdf:about="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-hao.owl">
<rdfs:seeAlso rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://purl.obolibrary.org/obo/uberon/references/reference_0000026</rdfs:seeAlso>
- <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-hao/2012-11-30/uberon/bridge/cl-bridge-to-hao.owl"/>
+ <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-hao/2012-12-02/uberon/bridge/cl-bridge-to-hao.owl"/>
</owl:Ontology>
View
2  bridge/cl-bridge-to-kupo.obo
@@ -1,5 +1,5 @@
ontology: uberon/bridge/cl-bridge-to-kupo
-data-version: 2012-11-30
+data-version: 2012-12-02
property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/references/reference_0000026" xsd:anyURI
[Term]
View
2  bridge/cl-bridge-to-kupo.owl
@@ -13,7 +13,7 @@
xmlns:doap="http://usefulinc.com/ns/doap#">
<owl:Ontology rdf:about="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-kupo.owl">
<rdfs:seeAlso rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://purl.obolibrary.org/obo/uberon/references/reference_0000026</rdfs:seeAlso>
- <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-kupo/2012-11-30/uberon/bridge/cl-bridge-to-kupo.owl"/>
+ <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-kupo/2012-12-02/uberon/bridge/cl-bridge-to-kupo.owl"/>
</owl:Ontology>
View
2  bridge/cl-bridge-to-ma.obo
@@ -1,5 +1,5 @@
ontology: uberon/bridge/cl-bridge-to-ma
-data-version: 2012-11-30
+data-version: 2012-12-02
property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/references/reference_0000026" xsd:anyURI
property_value: dc-title "CL bridge to ma" xsd:string
property_value: dc-description "Taxonomic equivalence axioms between adult moouse anatomy and CL" xsd:string
View
2  bridge/cl-bridge-to-ma.owl
@@ -20,7 +20,7 @@
<rdfs:seeAlso rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://purl.obolibrary.org/obo/uberon/references/reference_0000026</rdfs:seeAlso>
<terms:references rdf:resource="http://purl.obolibrary.org/obo/cl.owl"/>
<terms:references rdf:resource="http://purl.obolibrary.org/obo/ma.owl"/>
- <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-ma/2012-11-30/uberon/bridge/cl-bridge-to-ma.owl"/>
+ <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-ma/2012-12-02/uberon/bridge/cl-bridge-to-ma.owl"/>
</owl:Ontology>
View
2  bridge/cl-bridge-to-mfo.obo
@@ -1,5 +1,5 @@
ontology: uberon/bridge/cl-bridge-to-mfo
-data-version: 2012-11-30
+data-version: 2012-12-02
property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/references/reference_0000026" xsd:anyURI
[Term]
View
2  bridge/cl-bridge-to-mfo.owl
@@ -13,7 +13,7 @@
xmlns:doap="http://usefulinc.com/ns/doap#">
<owl:Ontology rdf:about="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-mfo.owl">
<rdfs:seeAlso rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://purl.obolibrary.org/obo/uberon/references/reference_0000026</rdfs:seeAlso>
- <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-mfo/2012-11-30/uberon/bridge/cl-bridge-to-mfo.owl"/>
+ <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-mfo/2012-12-02/uberon/bridge/cl-bridge-to-mfo.owl"/>
</owl:Ontology>
View
2  bridge/cl-bridge-to-ncithesaurus.obo
@@ -1,5 +1,5 @@
ontology: uberon/bridge/cl-bridge-to-ncithesaurus
-data-version: 2012-11-30
+data-version: 2012-12-02
property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/references/reference_0000026" xsd:anyURI
[Term]
View
2  bridge/cl-bridge-to-ncithesaurus.owl
@@ -13,7 +13,7 @@
xmlns:doap="http://usefulinc.com/ns/doap#">
<owl:Ontology rdf:about="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-ncithesaurus.owl">
<rdfs:seeAlso rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://purl.obolibrary.org/obo/uberon/references/reference_0000026</rdfs:seeAlso>
- <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-ncithesaurus/2012-11-30/uberon/bridge/cl-bridge-to-ncithesaurus.owl"/>
+ <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-ncithesaurus/2012-12-02/uberon/bridge/cl-bridge-to-ncithesaurus.owl"/>
</owl:Ontology>
View
2  bridge/cl-bridge-to-nif_grossanatomy.obo
@@ -1,5 +1,5 @@
ontology: uberon/bridge/cl-bridge-to-nif_grossanatomy
-data-version: 2012-11-30
+data-version: 2012-12-02
property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/references/reference_0000026" xsd:anyURI
[Typedef]
View
2  bridge/cl-bridge-to-nif_grossanatomy.owl
@@ -13,7 +13,7 @@
xmlns:doap="http://usefulinc.com/ns/doap#">
<owl:Ontology rdf:about="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-nif_grossanatomy.owl">
<rdfs:seeAlso rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://purl.obolibrary.org/obo/uberon/references/reference_0000026</rdfs:seeAlso>
- <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-nif_grossanatomy/2012-11-30/uberon/bridge/cl-bridge-to-nif_grossanatomy.owl"/>
+ <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-nif_grossanatomy/2012-12-02/uberon/bridge/cl-bridge-to-nif_grossanatomy.owl"/>
</owl:Ontology>
View
2  bridge/cl-bridge-to-og.obo
@@ -1,5 +1,5 @@
ontology: uberon/bridge/cl-bridge-to-og
-data-version: 2012-11-30
+data-version: 2012-12-02
property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/references/reference_0000026" xsd:anyURI
[Typedef]
View
2  bridge/cl-bridge-to-og.owl
@@ -13,7 +13,7 @@
xmlns:doap="http://usefulinc.com/ns/doap#">
<owl:Ontology rdf:about="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-og.owl">
<rdfs:seeAlso rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://purl.obolibrary.org/obo/uberon/references/reference_0000026</rdfs:seeAlso>
- <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-og/2012-11-30/uberon/bridge/cl-bridge-to-og.owl"/>
+ <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-og/2012-12-02/uberon/bridge/cl-bridge-to-og.owl"/>
</owl:Ontology>
View
2  bridge/cl-bridge-to-spd.obo
@@ -1,5 +1,5 @@
ontology: uberon/bridge/cl-bridge-to-spd
-data-version: 2012-11-30
+data-version: 2012-12-02
property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/references/reference_0000026" xsd:anyURI
[Term]
View
2  bridge/cl-bridge-to-spd.owl
@@ -13,7 +13,7 @@
xmlns:doap="http://usefulinc.com/ns/doap#">
<owl:Ontology rdf:about="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-spd.owl">
<rdfs:seeAlso rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://purl.obolibrary.org/obo/uberon/references/reference_0000026</rdfs:seeAlso>
- <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-spd/2012-11-30/uberon/bridge/cl-bridge-to-spd.owl"/>
+ <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-spd/2012-12-02/uberon/bridge/cl-bridge-to-spd.owl"/>
</owl:Ontology>
View
2  bridge/cl-bridge-to-tads.obo
@@ -1,5 +1,5 @@
ontology: uberon/bridge/cl-bridge-to-tads
-data-version: 2012-11-30
+data-version: 2012-12-02
property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/references/reference_0000026" xsd:anyURI
[Term]
View
2  bridge/cl-bridge-to-tads.owl
@@ -13,7 +13,7 @@
xmlns:doap="http://usefulinc.com/ns/doap#">
<owl:Ontology rdf:about="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-tads.owl">
<rdfs:seeAlso rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://purl.obolibrary.org/obo/uberon/references/reference_0000026</rdfs:seeAlso>
- <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-tads/2012-11-30/uberon/bridge/cl-bridge-to-tads.owl"/>
+ <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-tads/2012-12-02/uberon/bridge/cl-bridge-to-tads.owl"/>
</owl:Ontology>
View
2  bridge/cl-bridge-to-tao.obo
@@ -1,5 +1,5 @@
ontology: uberon/bridge/cl-bridge-to-tao
-data-version: 2012-11-30
+data-version: 2012-12-02
property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/references/reference_0000026" xsd:anyURI
property_value: dc-title "CL bridge to tao" xsd:string
property_value: dc-description "Taxonomic equivalence axioms between TAO and CL. Note that TAO is in the process of being merged into the core CL, so this mapping will become deprecated" xsd:string
View
2  bridge/cl-bridge-to-tao.owl
@@ -20,7 +20,7 @@
<rdfs:seeAlso rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://purl.obolibrary.org/obo/uberon/references/reference_0000026</rdfs:seeAlso>
<terms:references rdf:resource="http://purl.obolibrary.org/obo/cl.owl"/>
<terms:references rdf:resource="http://purl.obolibrary.org/obo/tao.owl"/>
- <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-tao/2012-11-30/uberon/bridge/cl-bridge-to-tao.owl"/>
+ <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-tao/2012-12-02/uberon/bridge/cl-bridge-to-tao.owl"/>
</owl:Ontology>
View
2  bridge/cl-bridge-to-tgma.obo
@@ -1,5 +1,5 @@
ontology: uberon/bridge/cl-bridge-to-tgma
-data-version: 2012-11-30
+data-version: 2012-12-02
property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/references/reference_0000026" xsd:anyURI
[Term]
View
2  bridge/cl-bridge-to-tgma.owl
@@ -13,7 +13,7 @@
xmlns:doap="http://usefulinc.com/ns/doap#">
<owl:Ontology rdf:about="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-tgma.owl">
<rdfs:seeAlso rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://purl.obolibrary.org/obo/uberon/references/reference_0000026</rdfs:seeAlso>
- <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-tgma/2012-11-30/uberon/bridge/cl-bridge-to-tgma.owl"/>
+ <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-tgma/2012-12-02/uberon/bridge/cl-bridge-to-tgma.owl"/>
</owl:Ontology>
View
2  bridge/cl-bridge-to-vsao.obo
@@ -1,5 +1,5 @@
ontology: uberon/bridge/cl-bridge-to-vsao
-data-version: 2012-11-30
+data-version: 2012-12-02
property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/references/reference_0000026" xsd:anyURI
property_value: dc-title "CL bridge to vsao" xsd:string
property_value: dc-description "Equivalence axioms between VSAO and CL. Note that VSAO is in the process of being merged into the core CL, so this mapping will become deprecated" xsd:string
View
2  bridge/cl-bridge-to-vsao.owl
@@ -22,7 +22,7 @@
<rdfs:seeAlso rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://purl.obolibrary.org/obo/uberon/references/reference_0000026</rdfs:seeAlso>
<terms:references rdf:resource="http://purl.obolibrary.org/obo/cl.owl"/>
<terms:references rdf:resource="http://purl.obolibrary.org/obo/vsao.owl"/>
- <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-vsao/2012-11-30/uberon/bridge/cl-bridge-to-vsao.owl"/>
+ <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-vsao/2012-12-02/uberon/bridge/cl-bridge-to-vsao.owl"/>
</owl:Ontology>
View
2  bridge/cl-bridge-to-wbbt.obo
@@ -1,5 +1,5 @@
ontology: uberon/bridge/cl-bridge-to-wbbt
-data-version: 2012-11-30
+data-version: 2012-12-02
property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/references/reference_0000026" xsd:anyURI
[Term]
View
2  bridge/cl-bridge-to-wbbt.owl
@@ -13,7 +13,7 @@
xmlns:doap="http://usefulinc.com/ns/doap#">
<owl:Ontology rdf:about="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-wbbt.owl">
<rdfs:seeAlso rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://purl.obolibrary.org/obo/uberon/references/reference_0000026</rdfs:seeAlso>
- <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-wbbt/2012-11-30/uberon/bridge/cl-bridge-to-wbbt.owl"/>
+ <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-wbbt/2012-12-02/uberon/bridge/cl-bridge-to-wbbt.owl"/>
</owl:Ontology>
View
2  bridge/cl-bridge-to-xao.obo
@@ -1,5 +1,5 @@
ontology: uberon/bridge/cl-bridge-to-xao
-data-version: 2012-11-30
+data-version: 2012-12-02
property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/references/reference_0000026" xsd:anyURI
property_value: dc-title "CL bridge to xao" xsd:string
property_value: dc-description "Taxonomic equivalence axioms between XAO and CL" xsd:string
View
2  bridge/cl-bridge-to-xao.owl
@@ -20,7 +20,7 @@
<rdfs:seeAlso rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://purl.obolibrary.org/obo/uberon/references/reference_0000026</rdfs:seeAlso>
<terms:references rdf:resource="http://purl.obolibrary.org/obo/cl.owl"/>
<terms:references rdf:resource="http://purl.obolibrary.org/obo/xao.owl"/>
- <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-xao/2012-11-30/uberon/bridge/cl-bridge-to-xao.owl"/>
+ <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-xao/2012-12-02/uberon/bridge/cl-bridge-to-xao.owl"/>
</owl:Ontology>
View
2  bridge/cl-bridge-to-zfa.obo
@@ -1,5 +1,5 @@
ontology: uberon/bridge/cl-bridge-to-zfa
-data-version: 2012-11-30
+data-version: 2012-12-02
property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/references/reference_0000026" xsd:anyURI
property_value: dc-title "CL bridge to zfa" xsd:string
property_value: dc-description "Taxonomic equivalence axioms between ZFA and CL" xsd:string
View
2  bridge/cl-bridge-to-zfa.owl
@@ -21,7 +21,7 @@
<rdfs:seeAlso rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://purl.obolibrary.org/obo/uberon/references/reference_0000026</rdfs:seeAlso>
<terms:references rdf:resource="http://purl.obolibrary.org/obo/cl.owl"/>
<terms:references rdf:resource="http://purl.obolibrary.org/obo/zfa.owl"/>
- <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-zfa/2012-11-30/uberon/bridge/cl-bridge-to-zfa.owl"/>
+ <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/cl-bridge-to-zfa/2012-12-02/uberon/bridge/cl-bridge-to-zfa.owl"/>
</owl:Ontology>
View
14 bridge/uberon-bridge-to-aao.obo
@@ -1,5 +1,5 @@
ontology: uberon/bridge/uberon-bridge-to-aao
-data-version: 2012-11-30
+data-version: 2012-12-02
property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/references/reference_0000026" xsd:anyURI
property_value: dc-title "Uberon bridge to aao" xsd:string
property_value: dc-description "Equivalence axioms between AAO and Uberon. Note that AAO is in the process of being merged into the core Uberon, so this mapping will become deprecated" xsd:string
@@ -1409,12 +1409,6 @@ intersection_of: UBERON:0001280 ! liver parenchyma
intersection_of: part_of NCBITaxon:8292
[Term]
-id: AAO:0010531 ! mesovarium
-property_value: IAO:0000589 "mesovarium (amphibian)" xsd:string
-intersection_of: UBERON:0001342 ! mesovarium
-intersection_of: part_of NCBITaxon:8292
-
-[Term]
id: AAO:0010237 ! femoral vein
property_value: IAO:0000589 "femoral vein (amphibian)" xsd:string
intersection_of: UBERON:0001361 ! femoral vein
@@ -4499,6 +4493,12 @@ intersection_of: UBERON:0006634 ! lingual vein
intersection_of: part_of NCBITaxon:8292
[Term]
+id: AAO:0010531 ! mesovarium
+property_value: IAO:0000589 "mesovarium (amphibian)" xsd:string
+intersection_of: UBERON:0001342 ! mesovarium
+intersection_of: part_of NCBITaxon:8292
+
+[Term]
id: AAO:0000749 ! glenoid fossa
property_value: IAO:0000589 "glenoid fossa (amphibian)" xsd:string
intersection_of: UBERON:0006657 ! glenoid fossa
View
2  bridge/uberon-bridge-to-aao.owl
@@ -21,7 +21,7 @@
<rdfs:seeAlso rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://purl.obolibrary.org/obo/uberon/references/reference_0000026</rdfs:seeAlso>
<terms:references rdf:resource="http://purl.obolibrary.org/obo/aao.owl"/>
<terms:references rdf:resource="http://purl.obolibrary.org/obo/uberon.owl"/>
- <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-aao/2012-11-30/uberon/bridge/uberon-bridge-to-aao.owl"/>
+ <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-aao/2012-12-02/uberon/bridge/uberon-bridge-to-aao.owl"/>
</owl:Ontology>
View
2  bridge/uberon-bridge-to-bila.obo
@@ -1,5 +1,5 @@
ontology: uberon/bridge/uberon-bridge-to-bila
-data-version: 2012-11-30
+data-version: 2012-12-02
property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/references/reference_0000026" xsd:anyURI
[Term]
View
2  bridge/uberon-bridge-to-bila.owl
@@ -13,7 +13,7 @@
xmlns:doap="http://usefulinc.com/ns/doap#">
<owl:Ontology rdf:about="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-bila.owl">
<rdfs:seeAlso rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://purl.obolibrary.org/obo/uberon/references/reference_0000026</rdfs:seeAlso>
- <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-bila/2012-11-30/uberon/bridge/uberon-bridge-to-bila.owl"/>
+ <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-bila/2012-12-02/uberon/bridge/uberon-bridge-to-bila.owl"/>
</owl:Ontology>
View
2  bridge/uberon-bridge-to-caro.obo
@@ -1,5 +1,5 @@
ontology: uberon/bridge/uberon-bridge-to-caro
-data-version: 2012-11-30
+data-version: 2012-12-02
property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/references/reference_0000026" xsd:anyURI
[Term]
View
2  bridge/uberon-bridge-to-caro.owl
@@ -13,7 +13,7 @@
xmlns:doap="http://usefulinc.com/ns/doap#">
<owl:Ontology rdf:about="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-caro.owl">
<rdfs:seeAlso rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://purl.obolibrary.org/obo/uberon/references/reference_0000026</rdfs:seeAlso>
- <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-caro/2012-11-30/uberon/bridge/uberon-bridge-to-caro.owl"/>
+ <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-caro/2012-12-02/uberon/bridge/uberon-bridge-to-caro.owl"/>
</owl:Ontology>
View
2  bridge/uberon-bridge-to-ehdaa.obo
@@ -1,5 +1,5 @@
ontology: uberon/bridge/uberon-bridge-to-ehdaa
-data-version: 2012-11-30
+data-version: 2012-12-02
property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/references/reference_0000026" xsd:anyURI
[Term]
View
2  bridge/uberon-bridge-to-ehdaa.owl
@@ -13,7 +13,7 @@
xmlns:doap="http://usefulinc.com/ns/doap#">
<owl:Ontology rdf:about="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-ehdaa.owl">
<rdfs:seeAlso rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://purl.obolibrary.org/obo/uberon/references/reference_0000026</rdfs:seeAlso>
- <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-ehdaa/2012-11-30/uberon/bridge/uberon-bridge-to-ehdaa.owl"/>
+ <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-ehdaa/2012-12-02/uberon/bridge/uberon-bridge-to-ehdaa.owl"/>
</owl:Ontology>
View
2  bridge/uberon-bridge-to-ehdaa2.obo
@@ -1,5 +1,5 @@
ontology: uberon/bridge/uberon-bridge-to-ehdaa2
-data-version: 2012-11-30
+data-version: 2012-12-02
property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/references/reference_0000026" xsd:anyURI
property_value: dc-title "Uberon bridge to ehdaa2" xsd:string
property_value: dc-description "Equivalence axioms between EHDAA2 and Uberon. EHDAA2 replaces EHDAA" xsd:string
View
2  bridge/uberon-bridge-to-ehdaa2.owl
@@ -19,7 +19,7 @@
<rdfs:seeAlso rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://purl.obolibrary.org/obo/uberon/references/reference_0000026</rdfs:seeAlso>
<terms:references rdf:resource="http://purl.obolibrary.org/obo/ehdaa2.owl"/>
<terms:references rdf:resource="http://purl.obolibrary.org/obo/uberon.owl"/>
- <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-ehdaa2/2012-11-30/uberon/bridge/uberon-bridge-to-ehdaa2.owl"/>
+ <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-ehdaa2/2012-12-02/uberon/bridge/uberon-bridge-to-ehdaa2.owl"/>
</owl:Ontology>
View
12 bridge/uberon-bridge-to-emapa.obo
@@ -1,5 +1,5 @@
ontology: uberon/bridge/uberon-bridge-to-emapa
-data-version: 2012-11-30
+data-version: 2012-12-02
property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/references/reference_0000026" xsd:anyURI
property_value: dc-title "Uberon bridge to emapa" xsd:string
property_value: dc-description "Taxonomic equivalence axioms between EMAPA (abstract developmental mouse) and Uberon" xsd:string
@@ -2346,11 +2346,6 @@ property_value: IAO:0000589 "omental bursa cavity (embryonic mouse)" xsd:string
is_a: UBERON:0005252 ! omental bursa cavity
[Term]
-id: EMAPA:17961 ! mesovarium
-property_value: IAO:0000589 "mesovarium (embryonic mouse)" xsd:string
-is_a: UBERON:0001342 ! mesovarium
-
-[Term]
id: EMAPA:27564 ! coelomic epithelium of gonad of genitourinary system
property_value: IAO:0000589 "germinal epithelium of ovary (embryonic mouse)" xsd:string
is_a: UBERON:0001304 ! germinal epithelium of ovary
@@ -11491,6 +11486,11 @@ property_value: IAO:0000589 "suspensory ligament of ovary (embryonic mouse)" xsd
is_a: UBERON:0006649 ! suspensory ligament of ovary
[Term]
+id: EMAPA:17961 ! mesovarium
+property_value: IAO:0000589 "mesovarium (embryonic mouse)" xsd:string
+is_a: UBERON:0001342 ! mesovarium
+
+[Term]
id: EMAPA:19179 ! tunica vaginalis testis
property_value: IAO:0000589 "tunica vaginalis testis (embryonic mouse)" xsd:string
is_a: UBERON:0006650 ! tunica vaginalis testis
View
2  bridge/uberon-bridge-to-emapa.owl
@@ -21,7 +21,7 @@
<dc:creator rdf:datatype="http://www.w3.org/2001/XMLSchema#string">vHOG editors</dc:creator>
<terms:references rdf:resource="http://purl.obolibrary.org/obo/fma.owl"/>
<terms:references rdf:resource="http://purl.obolibrary.org/obo/uberon.owl"/>
- <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-emapa/2012-11-30/uberon/bridge/uberon-bridge-to-emapa.owl"/>
+ <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-emapa/2012-12-02/uberon/bridge/uberon-bridge-to-emapa.owl"/>
</owl:Ontology>
View
2  bridge/uberon-bridge-to-fbbt.obo
@@ -1,5 +1,5 @@
ontology: uberon/bridge/uberon-bridge-to-fbbt
-data-version: 2012-11-30
+data-version: 2012-12-02
property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/references/reference_0000026" xsd:anyURI
property_value: dc-title "Uberon bridge to fbbt" xsd:string
property_value: dc-description "Taxonomic equivalence axioms between the drosophila anatomy ontology and Uberon. Note that currently Uberon focuses on chordate anatomy so there are only a minimal set of equivalencies for high level classes. In future Uberon may bridge via the arthropod anatomy ontology" xsd:string
View
2  bridge/uberon-bridge-to-fbbt.owl
@@ -19,7 +19,7 @@
<rdfs:seeAlso rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://purl.obolibrary.org/obo/uberon/references/reference_0000026</rdfs:seeAlso>
<terms:references rdf:resource="http://purl.obolibrary.org/obo/fbbt.owl"/>
<terms:references rdf:resource="http://purl.obolibrary.org/obo/uberon.owl"/>
- <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-fbbt/2012-11-30/uberon/bridge/uberon-bridge-to-fbbt.owl"/>
+ <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-fbbt/2012-12-02/uberon/bridge/uberon-bridge-to-fbbt.owl"/>
</owl:Ontology>
View
44 bridge/uberon-bridge-to-fma.obo
@@ -1,5 +1,5 @@
ontology: uberon/bridge/uberon-bridge-to-fma
-data-version: 2012-11-30
+data-version: 2012-12-02
property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/references/reference_0000026" xsd:anyURI
property_value: dc-title "Uberon bridge to fma" xsd:string
property_value: dc-description "Taxonomic equivalence axioms between the FMA and Uberon" xsd:string
@@ -5512,12 +5512,6 @@ intersection_of: UBERON:0005252 ! omental bursa cavity
intersection_of: part_of NCBITaxon:9606
[Term]
-id: FMA:19815 ! Mesovarium
-property_value: IAO:0000589 "mesovarium (post-embryonic human)" xsd:string
-intersection_of: UBERON:0001342 ! mesovarium
-intersection_of: part_of NCBITaxon:9606
-
-[Term]
id: FMA:18629 ! Germinal epithelium of ovary
property_value: IAO:0000589 "germinal epithelium of ovary (post-embryonic human)" xsd:string
intersection_of: UBERON:0001304 ! germinal epithelium of ovary
@@ -10510,6 +10504,12 @@ intersection_of: UBERON:0001963 ! bronchial-associated lymphoid tissue
intersection_of: part_of NCBITaxon:9606
[Term]
+id: FMA:79771 ! naso-pharyngeal lymphoid tissue
+property_value: IAO:0000589 "nasal-associated lymphoid tissue (post-embryonic human)" xsd:string
+intersection_of: UBERON:0012330 ! nasal-associated lymphoid tissue
+intersection_of: part_of NCBITaxon:9606
+
+[Term]
id: FMA:6283 ! Least splanchnic nerve
property_value: IAO:0000589 "least splanchnic nerve (post-embryonic human)" xsd:string
intersection_of: UBERON:0001964 ! least splanchnic nerve
@@ -13384,6 +13384,12 @@ intersection_of: UBERON:0002356 ! perineum
intersection_of: part_of NCBITaxon:9606
[Term]
+id: FMA:29350 ! perianal skin
+property_value: IAO:0000589 "perianal skin (post-embryonic human)" xsd:string
+intersection_of: UBERON:0012336 ! perianal skin
+intersection_of: part_of NCBITaxon:9606
+
+[Term]
id: FMA:9582 ! Serous pericardium
property_value: IAO:0000589 "serous pericardium (post-embryonic human)" xsd:string
intersection_of: UBERON:0002357 ! serous pericardium
@@ -23128,6 +23134,12 @@ intersection_of: UBERON:0010270 ! filum terminale externum
intersection_of: part_of NCBITaxon:9606
[Term]
+id: FMA:52590 ! cauda equina
+property_value: IAO:0000589 "cauda equina (post-embryonic human)" xsd:string
+intersection_of: UBERON:0012337 ! cauda equina
+intersection_of: part_of NCBITaxon:9606
+
+[Term]
id: FMA:24993 ! Segment of foot
property_value: IAO:0000589 "segment of pes (post-embryonic human)" xsd:string
intersection_of: UBERON:0005445 ! segment of pes
@@ -24346,6 +24358,24 @@ intersection_of: UBERON:0008847 ! ovarian ligament
intersection_of: part_of NCBITaxon:9606
[Term]
+id: FMA:19808 ! mesosalpinx
+property_value: IAO:0000589 "mesosalpinx (post-embryonic human)" xsd:string
+intersection_of: UBERON:0012331 ! mesosalpinx
+intersection_of: part_of NCBITaxon:9606
+
+[Term]
+id: FMA:16516 ! broad ligament of uterus
+property_value: IAO:0000589 "broad ligament of uterus (post-embryonic human)" xsd:string
+intersection_of: UBERON:0012332 ! broad ligament of uterus
+intersection_of: part_of NCBITaxon:9606
+
+[Term]
+id: FMA:19815 ! Mesovarium
+property_value: IAO:0000589 "mesovarium (post-embryonic human)" xsd:string
+intersection_of: UBERON:0001342 ! mesovarium
+intersection_of: part_of NCBITaxon:9606
+
+[Term]
id: FMA:19844 ! Tunica vaginalis of testis
property_value: IAO:0000589 "tunica vaginalis testis (post-embryonic human)" xsd:string
intersection_of: UBERON:0006650 ! tunica vaginalis testis
View
132 bridge/uberon-bridge-to-fma.owl
@@ -20,7 +20,7 @@
<rdfs:seeAlso rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://purl.obolibrary.org/obo/uberon/references/reference_0000026</rdfs:seeAlso>
<terms:references rdf:resource="http://purl.obolibrary.org/obo/fma.owl"/>
<terms:references rdf:resource="http://purl.obolibrary.org/obo/uberon.owl"/>
- <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-fma/2012-11-30/uberon/bridge/uberon-bridge-to-fma.owl"/>
+ <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-fma/2012-12-02/uberon/bridge/uberon-bridge-to-fma.owl"/>
</owl:Ontology>
@@ -9758,6 +9758,26 @@
+ <!-- http://purl.obolibrary.org/obo/FMA_16516 -->
+
+ <owl:Class rdf:about="http://purl.obolibrary.org/obo/FMA_16516">
+ <owl:equivalentClass>
+ <owl:Class>
+ <owl:intersectionOf rdf:parseType="Collection">
+ <rdf:Description rdf:about="http://purl.obolibrary.org/obo/UBERON_0012332"/>
+ <owl:Restriction>
+ <owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
+ <owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/NCBITaxon_9606"/>
+ </owl:Restriction>
+ </owl:intersectionOf>
+ </owl:Class>
+ </owl:equivalentClass>
+ <oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">FMA:16516</oboInOwl:id>
+ <obo:IAO_0000589 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">broad ligament of uterus (post-embryonic human)</obo:IAO_0000589>
+ </owl:Class>
+
+
+
<!-- http://purl.obolibrary.org/obo/FMA_16517 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/FMA_16517">
@@ -14138,6 +14158,26 @@
+ <!-- http://purl.obolibrary.org/obo/FMA_19808 -->
+
+ <owl:Class rdf:about="http://purl.obolibrary.org/obo/FMA_19808">
+ <owl:equivalentClass>
+ <owl:Class>
+ <owl:intersectionOf rdf:parseType="Collection">
+ <rdf:Description rdf:about="http://purl.obolibrary.org/obo/UBERON_0012331"/>
+ <owl:Restriction>
+ <owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
+ <owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/NCBITaxon_9606"/>
+ </owl:Restriction>
+ </owl:intersectionOf>
+ </owl:Class>
+ </owl:equivalentClass>
+ <oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">FMA:19808</oboInOwl:id>
+ <obo:IAO_0000589 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">mesosalpinx (post-embryonic human)</obo:IAO_0000589>
+ </owl:Class>
+
+
+
<!-- http://purl.obolibrary.org/obo/FMA_19812 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/FMA_19812">
@@ -24100,6 +24140,26 @@
+ <!-- http://purl.obolibrary.org/obo/FMA_29350 -->
+
+ <owl:Class rdf:about="http://purl.obolibrary.org/obo/FMA_29350">
+ <owl:equivalentClass>
+ <owl:Class>
+ <owl:intersectionOf rdf:parseType="Collection">
+ <rdf:Description rdf:about="http://purl.obolibrary.org/obo/UBERON_0012336"/>
+ <owl:Restriction>
+ <owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
+ <owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/NCBITaxon_9606"/>
+ </owl:Restriction>
+ </owl:intersectionOf>
+ </owl:Class>
+ </owl:equivalentClass>
+ <oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">FMA:29350</oboInOwl:id>
+ <obo:IAO_0000589 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">perianal skin (post-embryonic human)</obo:IAO_0000589>
+ </owl:Class>
+
+
+
<!-- http://purl.obolibrary.org/obo/FMA_29711 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/FMA_29711">
@@ -37022,6 +37082,26 @@
+ <!-- http://purl.obolibrary.org/obo/FMA_52590 -->
+
+ <owl:Class rdf:about="http://purl.obolibrary.org/obo/FMA_52590">
+ <owl:equivalentClass>
+ <owl:Class>
+ <owl:intersectionOf rdf:parseType="Collection">
+ <rdf:Description rdf:about="http://purl.obolibrary.org/obo/UBERON_0012337"/>
+ <owl:Restriction>
+ <owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
+ <owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/NCBITaxon_9606"/>
+ </owl:Restriction>
+ </owl:intersectionOf>
+ </owl:Class>
+ </owl:equivalentClass>
+ <oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">FMA:52590</oboInOwl:id>
+ <obo:IAO_0000589 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">cauda equina (post-embryonic human)</obo:IAO_0000589>
+ </owl:Class>
+
+
+
<!-- http://purl.obolibrary.org/obo/FMA_52609 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/FMA_52609">
@@ -79790,6 +79870,26 @@
+ <!-- http://purl.obolibrary.org/obo/FMA_79771 -->
+
+ <owl:Class rdf:about="http://purl.obolibrary.org/obo/FMA_79771">
+ <owl:equivalentClass>
+ <owl:Class>
+ <owl:intersectionOf rdf:parseType="Collection">
+ <rdf:Description rdf:about="http://purl.obolibrary.org/obo/UBERON_0012330"/>
+ <owl:Restriction>
+ <owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000050"/>
+ <owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/NCBITaxon_9606"/>
+ </owl:Restriction>
+ </owl:intersectionOf>
+ </owl:Class>
+ </owl:equivalentClass>
+ <oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">FMA:79771</oboInOwl:id>
+ <obo:IAO_0000589 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">nasal-associated lymphoid tissue (post-embryonic human)</obo:IAO_0000589>
+ </owl:Class>
+
+
+
<!-- http://purl.obolibrary.org/obo/FMA_79789 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/FMA_79789">
@@ -115572,6 +115672,36 @@
+ <!-- http://purl.obolibrary.org/obo/UBERON_0012330 -->
+
+ <owl:Class rdf:about="http://purl.obolibrary.org/obo/UBERON_0012330"/>
+
+
+
+ <!-- http://purl.obolibrary.org/obo/UBERON_0012331 -->
+
+ <owl:Class rdf:about="http://purl.obolibrary.org/obo/UBERON_0012331"/>
+
+
+
+ <!-- http://purl.obolibrary.org/obo/UBERON_0012332 -->
+
+ <owl:Class rdf:about="http://purl.obolibrary.org/obo/UBERON_0012332"/>
+
+
+
+ <!-- http://purl.obolibrary.org/obo/UBERON_0012336 -->
+
+ <owl:Class rdf:about="http://purl.obolibrary.org/obo/UBERON_0012336"/>
+
+
+
+ <!-- http://purl.obolibrary.org/obo/UBERON_0012337 -->
+
+ <owl:Class rdf:about="http://purl.obolibrary.org/obo/UBERON_0012337"/>
+
+
+
<!-- http://purl.obolibrary.org/obo/UBERON_1000019 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/UBERON_1000019"/>
View
2  bridge/uberon-bridge-to-go.obo
@@ -1,5 +1,5 @@
ontology: uberon/bridge/uberon-bridge-to-go
-data-version: 2012-11-30
+data-version: 2012-12-02
property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/references/reference_0000026" xsd:anyURI
[Term]
View
2  bridge/uberon-bridge-to-go.owl
@@ -13,7 +13,7 @@
xmlns:doap="http://usefulinc.com/ns/doap#">
<owl:Ontology rdf:about="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-go.owl">
<rdfs:seeAlso rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://purl.obolibrary.org/obo/uberon/references/reference_0000026</rdfs:seeAlso>
- <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-go/2012-11-30/uberon/bridge/uberon-bridge-to-go.owl"/>
+ <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-go/2012-12-02/uberon/bridge/uberon-bridge-to-go.owl"/>
</owl:Ontology>
View
2  bridge/uberon-bridge-to-hao.obo
@@ -1,5 +1,5 @@
ontology: uberon/bridge/uberon-bridge-to-hao
-data-version: 2012-11-30
+data-version: 2012-12-02
property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/references/reference_0000026" xsd:anyURI
[Term]
View
2  bridge/uberon-bridge-to-hao.owl
@@ -13,7 +13,7 @@
xmlns:doap="http://usefulinc.com/ns/doap#">
<owl:Ontology rdf:about="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-hao.owl">
<rdfs:seeAlso rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://purl.obolibrary.org/obo/uberon/references/reference_0000026</rdfs:seeAlso>
- <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-hao/2012-11-30/uberon/bridge/uberon-bridge-to-hao.owl"/>
+ <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-hao/2012-12-02/uberon/bridge/uberon-bridge-to-hao.owl"/>
</owl:Ontology>
View
2  bridge/uberon-bridge-to-ma.obo
@@ -1,5 +1,5 @@
ontology: uberon/bridge/uberon-bridge-to-ma
-data-version: 2012-11-30
+data-version: 2012-12-02
property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/references/reference_0000026" xsd:anyURI
property_value: dc-title "Uberon bridge to ma" xsd:string
property_value: dc-description "Taxonomic equivalence axioms between adult moouse anatomy and Uberon" xsd:string
View
2  bridge/uberon-bridge-to-ma.owl
@@ -20,7 +20,7 @@
<rdfs:seeAlso rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://purl.obolibrary.org/obo/uberon/references/reference_0000026</rdfs:seeAlso>
<terms:references rdf:resource="http://purl.obolibrary.org/obo/ma.owl"/>
<terms:references rdf:resource="http://purl.obolibrary.org/obo/uberon.owl"/>
- <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-ma/2012-11-30/uberon/bridge/uberon-bridge-to-ma.owl"/>
+ <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-ma/2012-12-02/uberon/bridge/uberon-bridge-to-ma.owl"/>
</owl:Ontology>
View
2  bridge/uberon-bridge-to-mfo.obo
@@ -1,5 +1,5 @@
ontology: uberon/bridge/uberon-bridge-to-mfo
-data-version: 2012-11-30
+data-version: 2012-12-02
property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/references/reference_0000026" xsd:anyURI
[Term]
View
2  bridge/uberon-bridge-to-mfo.owl
@@ -13,7 +13,7 @@
xmlns:doap="http://usefulinc.com/ns/doap#">
<owl:Ontology rdf:about="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-mfo.owl">
<rdfs:seeAlso rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://purl.obolibrary.org/obo/uberon/references/reference_0000026</rdfs:seeAlso>
- <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-mfo/2012-11-30/uberon/bridge/uberon-bridge-to-mfo.owl"/>
+ <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-mfo/2012-12-02/uberon/bridge/uberon-bridge-to-mfo.owl"/>
</owl:Ontology>
View
41 bridge/uberon-bridge-to-ncithesaurus.obo
@@ -1,5 +1,5 @@
ontology: uberon/bridge/uberon-bridge-to-ncithesaurus
-data-version: 2012-11-30
+data-version: 2012-12-02
property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/references/reference_0000026" xsd:anyURI
[Term]
@@ -3158,11 +3158,6 @@ property_value: IAO:0000589 "lesser sac (ncithesaurus)" xsd:string
is_a: UBERON:0001341 ! lesser sac
[Term]
-id: ncithesaurus:Mesovarian_Ligament ! mesovarium
-property_value: IAO:0000589 "mesovarium (ncithesaurus)" xsd:string
-is_a: UBERON:0001342 ! mesovarium
-
-[Term]
id: ncithesaurus:Ovarian_Surface_Epithelium ! Ovarian Surface Epithelium
property_value: IAO:0000589 "germinal epithelium of ovary (ncithesaurus)" xsd:string
is_a: UBERON:0001304 ! germinal epithelium of ovary
@@ -5519,8 +5514,8 @@ is_a: UBERON:0001911 ! mammary gland
[Term]
id: ncithesaurus:Montgomery_s_Tubercle ! montgomery tubercle
-property_value: IAO:0000589 "areolar tubercle (ncithesaurus)" xsd:string
-is_a: UBERON:0011828 ! areolar tubercle
+property_value: IAO:0000589 "areolar gland (ncithesaurus)" xsd:string
+is_a: UBERON:0011827 ! areolar gland
[Term]
id: ncithesaurus:Capillary_Endothelium ! Capillary Endothelium
@@ -5693,6 +5688,11 @@ property_value: IAO:0000589 "bronchial-associated lymphoid tissue (ncithesaurus)
is_a: UBERON:0001963 ! bronchial-associated lymphoid tissue
[Term]
+id: ncithesaurus:Nasal-Associated_Lymphoid_Tissue ! nasal-associated lymphoid tissue
+property_value: IAO:0000589 "nasal-associated lymphoid tissue (ncithesaurus)" xsd:string
+is_a: UBERON:0012330 ! nasal-associated lymphoid tissue
+
+[Term]
id: ncithesaurus:Pars_Compacta ! pars compacta
property_value: IAO:0000589 "substantia nigra pars compacta (ncithesaurus)" xsd:string
is_a: UBERON:0001965 ! substantia nigra pars compacta
@@ -10208,6 +10208,11 @@ property_value: IAO:0000589 "external oblique (ncithesaurus)" xsd:string
is_a: UBERON:0005442 ! external oblique
[Term]
+id: ncithesaurus:Cauda_Equina ! cauda equina
+property_value: IAO:0000589 "cauda equina (ncithesaurus)" xsd:string
+is_a: UBERON:0012337 ! cauda equina
+
+[Term]
id: ncithesaurus:Gallbladder_Fundus ! Gallbladder Fundus
property_value: IAO:0000589 "fundus of gallbladder (ncithesaurus)" xsd:string
is_a: UBERON:0006081 ! fundus of gallbladder
@@ -10503,6 +10508,21 @@ property_value: IAO:0000589 "parametrium (ncithesaurus)" xsd:string
is_a: UBERON:0010391 ! parametrium
[Term]
+id: ncithesaurus:Broad_Ligament ! broad ligament
+property_value: IAO:0000589 "broad ligament of uterus (ncithesaurus)" xsd:string
+is_a: UBERON:0012332 ! broad ligament of uterus
+
+[Term]
+id: ncithesaurus:Broad_Ligament ! broad ligament
+property_value: IAO:0000589 "broad ligament of uterus (ncithesaurus)" xsd:string
+is_a: UBERON:0012332 ! broad ligament of uterus
+
+[Term]
+id: ncithesaurus:Mesovarian_Ligament ! mesovarium
+property_value: IAO:0000589 "mesovarium (ncithesaurus)" xsd:string
+is_a: UBERON:0001342 ! mesovarium
+
+[Term]
id: ncithesaurus:Glans_Clitoris ! Glans Clitoris
property_value: IAO:0000589 "glans clitoris (ncithesaurus)" xsd:string
is_a: UBERON:0006653 ! glans clitoris
@@ -11178,11 +11198,6 @@ property_value: IAO:0000589 "nutrient artery (ncithesaurus)" xsd:string
is_a: UBERON:0010176 ! nutrient artery
[Term]
-id: ncithesaurus:Apocrine_Sweat_Gland !
-property_value: IAO:0000589 "skin apocrine gland (ncithesaurus)" xsd:string
-is_a: UBERON:0012177 ! skin apocrine gland
-
-[Term]
id: ncithesaurus:Skin_of_the_Scalp_and_Neck !
property_value: IAO:0000589 "head or neck skin (ncithesaurus)" xsd:string
is_a: UBERON:0012180 ! head or neck skin
View
66 bridge/uberon-bridge-to-ncithesaurus.owl
@@ -13,7 +13,7 @@
xmlns:doap="http://usefulinc.com/ns/doap#">
<owl:Ontology rdf:about="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-ncithesaurus.owl">
<rdfs:seeAlso rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://purl.obolibrary.org/obo/uberon/references/reference_0000026</rdfs:seeAlso>
- <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-ncithesaurus/2012-11-30/uberon/bridge/uberon-bridge-to-ncithesaurus.owl"/>
+ <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-ncithesaurus/2012-12-02/uberon/bridge/uberon-bridge-to-ncithesaurus.owl"/>
</owl:Ontology>
@@ -13257,9 +13257,9 @@
- <!-- http://purl.obolibrary.org/obo/UBERON_0011828 -->
+ <!-- http://purl.obolibrary.org/obo/UBERON_0011827 -->
- <owl:Class rdf:about="http://purl.obolibrary.org/obo/UBERON_0011828"/>
+ <owl:Class rdf:about="http://purl.obolibrary.org/obo/UBERON_0011827"/>
@@ -13335,12 +13335,6 @@
- <!-- http://purl.obolibrary.org/obo/UBERON_0012177 -->
-
- <owl:Class rdf:about="http://purl.obolibrary.org/obo/UBERON_0012177"/>
-
-
-
<!-- http://purl.obolibrary.org/obo/UBERON_0012180 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/UBERON_0012180"/>
@@ -13449,6 +13443,24 @@
+ <!-- http://purl.obolibrary.org/obo/UBERON_0012330 -->
+
+ <owl:Class rdf:about="http://purl.obolibrary.org/obo/UBERON_0012330"/>
+
+
+
+ <!-- http://purl.obolibrary.org/obo/UBERON_0012332 -->
+
+ <owl:Class rdf:about="http://purl.obolibrary.org/obo/UBERON_0012332"/>
+
+
+
+ <!-- http://purl.obolibrary.org/obo/UBERON_0012337 -->
+
+ <owl:Class rdf:about="http://purl.obolibrary.org/obo/UBERON_0012337"/>
+
+
+
<!-- http://purl.obolibrary.org/obo/UBERON_1000021 -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/UBERON_1000021"/>
@@ -18195,10 +18207,8 @@
<owl:Class rdf:about="http://purl.obolibrary.org/obo/ncithesaurus#_Apocrine_Sweat_Gland">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/UBERON_0000382"/>
- <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/UBERON_0012177"/>
<obo:IAO_0000589 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">apocrine sweat gland (ncithesaurus)</obo:IAO_0000589>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">ncithesaurus:Apocrine_Sweat_Gland</oboInOwl:id>
- <obo:IAO_0000589 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">skin apocrine gland (ncithesaurus)</obo:IAO_0000589>
</owl:Class>
@@ -19073,6 +19083,16 @@
+ <!-- http://purl.obolibrary.org/obo/ncithesaurus#_Broad_Ligament -->
+
+ <owl:Class rdf:about="http://purl.obolibrary.org/obo/ncithesaurus#_Broad_Ligament">
+ <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/UBERON_0012332"/>
+ <obo:IAO_0000589 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">broad ligament of uterus (ncithesaurus)</obo:IAO_0000589>
+ <oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">ncithesaurus:Broad_Ligament</oboInOwl:id>
+ </owl:Class>
+
+
+
<!-- http://purl.obolibrary.org/obo/ncithesaurus#_Bronchial_Artery -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/ncithesaurus#_Bronchial_Artery">
@@ -19583,6 +19603,16 @@
+ <!-- http://purl.obolibrary.org/obo/ncithesaurus#_Cauda_Equina -->
+
+ <owl:Class rdf:about="http://purl.obolibrary.org/obo/ncithesaurus#_Cauda_Equina">
+ <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/UBERON_0012337"/>
+ <obo:IAO_0000589 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">cauda equina (ncithesaurus)</obo:IAO_0000589>
+ <oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">ncithesaurus:Cauda_Equina</oboInOwl:id>
+ </owl:Class>
+
+
+
<!-- http://purl.obolibrary.org/obo/ncithesaurus#_Caudal_Vein -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/ncithesaurus#_Caudal_Vein">
@@ -27488,8 +27518,8 @@
<!-- http://purl.obolibrary.org/obo/ncithesaurus#_Montgomery_s_Tubercle -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/ncithesaurus#_Montgomery_s_Tubercle">
- <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/UBERON_0011828"/>
- <obo:IAO_0000589 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">areolar tubercle (ncithesaurus)</obo:IAO_0000589>
+ <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/UBERON_0011827"/>
+ <obo:IAO_0000589 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">areolar gland (ncithesaurus)</obo:IAO_0000589>
<oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">ncithesaurus:Montgomery_s_Tubercle</oboInOwl:id>
</owl:Class>
@@ -27705,6 +27735,16 @@
+ <!-- http://purl.obolibrary.org/obo/ncithesaurus#_Nasal-Associated_Lymphoid_Tissue -->
+
+ <owl:Class rdf:about="http://purl.obolibrary.org/obo/ncithesaurus#_Nasal-Associated_Lymphoid_Tissue">
+ <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/UBERON_0012330"/>
+ <obo:IAO_0000589 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">nasal-associated lymphoid tissue (ncithesaurus)</obo:IAO_0000589>
+ <oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">ncithesaurus:Nasal-Associated_Lymphoid_Tissue</oboInOwl:id>
+ </owl:Class>
+
+
+
<!-- http://purl.obolibrary.org/obo/ncithesaurus#_Nasal_Bone -->
<owl:Class rdf:about="http://purl.obolibrary.org/obo/ncithesaurus#_Nasal_Bone">
View
2  bridge/uberon-bridge-to-nif_grossanatomy.obo
@@ -1,5 +1,5 @@
ontology: uberon/bridge/uberon-bridge-to-nif_grossanatomy
-data-version: 2012-11-30
+data-version: 2012-12-02
property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/references/reference_0000026" xsd:anyURI
[Term]
View
2  bridge/uberon-bridge-to-nif_grossanatomy.owl
@@ -13,7 +13,7 @@
xmlns:doap="http://usefulinc.com/ns/doap#">
<owl:Ontology rdf:about="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-nif_grossanatomy.owl">
<rdfs:seeAlso rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://purl.obolibrary.org/obo/uberon/references/reference_0000026</rdfs:seeAlso>
- <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-nif_grossanatomy/2012-11-30/uberon/bridge/uberon-bridge-to-nif_grossanatomy.owl"/>
+ <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-nif_grossanatomy/2012-12-02/uberon/bridge/uberon-bridge-to-nif_grossanatomy.owl"/>
</owl:Ontology>
View
2  bridge/uberon-bridge-to-og.obo
@@ -1,5 +1,5 @@
ontology: uberon/bridge/uberon-bridge-to-og
-data-version: 2012-11-30
+data-version: 2012-12-02
property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/references/reference_0000026" xsd:anyURI
[Typedef]
View
2  bridge/uberon-bridge-to-og.owl
@@ -13,7 +13,7 @@
xmlns:doap="http://usefulinc.com/ns/doap#">
<owl:Ontology rdf:about="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-og.owl">
<rdfs:seeAlso rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://purl.obolibrary.org/obo/uberon/references/reference_0000026</rdfs:seeAlso>
- <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-og/2012-11-30/uberon/bridge/uberon-bridge-to-og.owl"/>
+ <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-og/2012-12-02/uberon/bridge/uberon-bridge-to-og.owl"/>
</owl:Ontology>
View
2  bridge/uberon-bridge-to-spd.obo
@@ -1,5 +1,5 @@
ontology: uberon/bridge/uberon-bridge-to-spd
-data-version: 2012-11-30
+data-version: 2012-12-02
property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/references/reference_0000026" xsd:anyURI
[Term]
View
2  bridge/uberon-bridge-to-spd.owl
@@ -13,7 +13,7 @@
xmlns:doap="http://usefulinc.com/ns/doap#">
<owl:Ontology rdf:about="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-spd.owl">
<rdfs:seeAlso rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://purl.obolibrary.org/obo/uberon/references/reference_0000026</rdfs:seeAlso>
- <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-spd/2012-11-30/uberon/bridge/uberon-bridge-to-spd.owl"/>
+ <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-spd/2012-12-02/uberon/bridge/uberon-bridge-to-spd.owl"/>
</owl:Ontology>
View
2  bridge/uberon-bridge-to-tads.obo
@@ -1,5 +1,5 @@
ontology: uberon/bridge/uberon-bridge-to-tads
-data-version: 2012-11-30
+data-version: 2012-12-02
property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/references/reference_0000026" xsd:anyURI
[Term]
View
2  bridge/uberon-bridge-to-tads.owl
@@ -13,7 +13,7 @@
xmlns:doap="http://usefulinc.com/ns/doap#">
<owl:Ontology rdf:about="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-tads.owl">
<rdfs:seeAlso rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://purl.obolibrary.org/obo/uberon/references/reference_0000026</rdfs:seeAlso>
- <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-tads/2012-11-30/uberon/bridge/uberon-bridge-to-tads.owl"/>
+ <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-tads/2012-12-02/uberon/bridge/uberon-bridge-to-tads.owl"/>
</owl:Ontology>
View
2  bridge/uberon-bridge-to-tao.owl
@@ -20,7 +20,7 @@
<rdfs:seeAlso rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://purl.obolibrary.org/obo/uberon/references/reference_0000026</rdfs:seeAlso>
<terms:references rdf:resource="http://purl.obolibrary.org/obo/tao.owl"/>
<terms:references rdf:resource="http://purl.obolibrary.org/obo/uberon.owl"/>
- <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-tao/2012-11-30/uberon/bridge/uberon-bridge-to-tao.owl"/>
+ <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-tao/2012-12-02/uberon/bridge/uberon-bridge-to-tao.owl"/>
</owl:Ontology>
View
2  bridge/uberon-bridge-to-tgma.obo
@@ -1,5 +1,5 @@
ontology: uberon/bridge/uberon-bridge-to-tgma
-data-version: 2012-11-30
+data-version: 2012-12-02
property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/references/reference_0000026" xsd:anyURI
[Term]
View
2  bridge/uberon-bridge-to-tgma.owl
@@ -13,7 +13,7 @@
xmlns:doap="http://usefulinc.com/ns/doap#">
<owl:Ontology rdf:about="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-tgma.owl">
<rdfs:seeAlso rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://purl.obolibrary.org/obo/uberon/references/reference_0000026</rdfs:seeAlso>
- <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-tgma/2012-11-30/uberon/bridge/uberon-bridge-to-tgma.owl"/>
+ <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-tgma/2012-12-02/uberon/bridge/uberon-bridge-to-tgma.owl"/>
</owl:Ontology>
View
2  bridge/uberon-bridge-to-wbbt.obo
@@ -1,5 +1,5 @@
ontology: uberon/bridge/uberon-bridge-to-wbbt
-data-version: 2012-11-30
+data-version: 2012-12-02
property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/references/reference_0000026" xsd:anyURI
[Term]
View
2  bridge/uberon-bridge-to-wbbt.owl
@@ -13,7 +13,7 @@
xmlns:doap="http://usefulinc.com/ns/doap#">
<owl:Ontology rdf:about="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-wbbt.owl">
<rdfs:seeAlso rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://purl.obolibrary.org/obo/uberon/references/reference_0000026</rdfs:seeAlso>
- <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-wbbt/2012-11-30/uberon/bridge/uberon-bridge-to-wbbt.owl"/>
+ <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-wbbt/2012-12-02/uberon/bridge/uberon-bridge-to-wbbt.owl"/>
</owl:Ontology>
View
2  bridge/uberon-bridge-to-xao.obo
@@ -1,5 +1,5 @@
ontology: uberon/bridge/uberon-bridge-to-xao
-data-version: 2012-11-30
+data-version: 2012-12-02
property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/references/reference_0000026" xsd:anyURI
property_value: dc-title "Uberon bridge to xao" xsd:string
property_value: dc-description "Taxonomic equivalence axioms between XAO and Uberon" xsd:string
View
2  bridge/uberon-bridge-to-xao.owl
@@ -20,7 +20,7 @@
<rdfs:seeAlso rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://purl.obolibrary.org/obo/uberon/references/reference_0000026</rdfs:seeAlso>
<terms:references rdf:resource="http://purl.obolibrary.org/obo/uberon.owl"/>
<terms:references rdf:resource="http://purl.obolibrary.org/obo/xao.owl"/>
- <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-xao/2012-11-30/uberon/bridge/uberon-bridge-to-xao.owl"/>
+ <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-xao/2012-12-02/uberon/bridge/uberon-bridge-to-xao.owl"/>
</owl:Ontology>
View
14 bridge/uberon-bridge-to-zfa.obo
@@ -1,5 +1,5 @@
ontology: uberon/bridge/uberon-bridge-to-zfa
-data-version: 2012-11-30
+data-version: 2012-12-02
property_value: seeAlso "http://purl.obolibrary.org/obo/uberon/references/reference_0000026" xsd:anyURI
property_value: dc-title "Uberon bridge to zfa" xsd:string
property_value: dc-description "Taxonomic equivalence axioms between ZFA and Uberon" xsd:string
@@ -1421,12 +1421,6 @@ intersection_of: UBERON:0001305 ! ovarian follicle
intersection_of: part_of NCBITaxon:7954
[Term]
-id: ZFA:0000333 ! mesovarium
-property_value: IAO:0000589 "mesovarium (zebrafish)" xsd:string
-intersection_of: UBERON:0001342 ! mesovarium
-intersection_of: part_of NCBITaxon:7954
-
-[Term]
id: ZFA:0001626 ! cerebral spinal fluid
property_value: IAO:0000589 "cerebrospinal fluid (zebrafish)" xsd:string
intersection_of: UBERON:0001359 ! cerebrospinal fluid
@@ -5405,6 +5399,12 @@ intersection_of: UBERON:0006605 ! tectum synoticum
intersection_of: part_of NCBITaxon:7954
[Term]
+id: ZFA:0000333 ! mesovarium
+property_value: IAO:0000589 "mesovarium (zebrafish)" xsd:string
+intersection_of: UBERON:0001342 ! mesovarium
+intersection_of: part_of NCBITaxon:7954
+
+[Term]
id: ZFA:0000334 ! corpus mamillare
property_value: IAO:0000589 "mammillary body (zebrafish)" xsd:string
intersection_of: UBERON:0002206 ! mammillary body
View
2  bridge/uberon-bridge-to-zfa.owl
@@ -21,7 +21,7 @@
<rdfs:seeAlso rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://purl.obolibrary.org/obo/uberon/references/reference_0000026</rdfs:seeAlso>
<terms:references rdf:resource="http://purl.obolibrary.org/obo/uberon.owl"/>
<terms:references rdf:resource="http://purl.obolibrary.org/obo/zfa.owl"/>
- <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-zfa/2012-11-30/uberon/bridge/uberon-bridge-to-zfa.owl"/>
+ <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/uberon/bridge/uberon-bridge-to-zfa/2012-12-02/uberon/bridge/uberon-bridge-to-zfa.owl"/>
</owl:Ontology>
View
212 uberon-simple.obo
@@ -1,6 +1,6 @@
format-version: 1.2
-data-version: 2012-11-31
-data-version: 2012-11-30
+data-version: 2012-12-03
+data-version: 2012-12-02
subsetdef: cyclostome_subset "cyclostome structures"
subsetdef: defined_by_ordinal_series "classes that are defined by relative position counting from first in a series of elements along an axis in an individual organism rather than by strict homology"
subsetdef: developmental_classification "developmental_classification"
@@ -3383,6 +3383,7 @@ xref: FMA:21496
xref: galen:Ligament
xref: http://upload.wikimedia.org/wikipedia/commons/9/9a/Knee_diagram.svg
xref: MA:0000113
+xref: MESH:A02.513
xref: ncithesaurus:Ligament
xref: OpenCyc:Mx4rvVjqpZwpEbGdrcN5Y29ycA
xref: SCTID:182358004
@@ -4585,13 +4586,16 @@ name: apocrine sweat gland
def: "Apocrine sweat glands are sweat glands composed of a coiled secretory portion located at the junction of the dermis and subcutaneous fat, from which a straight portion inserts and secretes into the infundibular portion of the hair follicle. In humans, apocrine sweat glands are found only in certain locations of the body: the axillae (armpits), the areola of the nipples, and the genitoanal region. The ducts of apocrine glands open into the canals of hair follicles. The stimulus for the secretion of apocrine sweat glands is adrenaline, which is a hormone carried in the blood[WP]." [Wikipedia:Apocrine_sweat_gland]
comment: A note of confusion is the difference between apocrine secretion and apocrine sweat gland. Apocrine secretion refers to the apical loss of a cell's membrane to create cell blebs, thus creating a secretory product. Apocrine sweat gland refers to a structure, not a secretion process. Apocrine sweat glands actually use a merocrine type secretion, or that mediated by exocytosis of secretory granules. When "apocrine gland" is used without the word sweat, it is often referring to the gland which uses merocrine secretion, and not the secretion method. The important difference in apocrine sweat gland structure is its larger lumen, compared to the more narrow lumen of the eccrine sweat gland.
subset: organ_slim
+synonym: "glandula sudorifera apocrina" EXACT LATIN [Wikipedia:Apocrine_sweat_gland]
xref: BTO:0001458
xref: FMA:59155
xref: MESH:A10.336.899.206
xref: ncithesaurus:Apocrine_Sweat_Gland
xref: SCTID:399916008
-is_a: UBERON:0001820 ! sweat gland
-is_a: UBERON:0012177 ! skin apocrine gland
+is_a: UBERON:0001820 {source="FMA"} ! sweat gland
+is_a: UBERON:0010243 {notes="The term apocrine sweat gland is a misnomer. While it was once thought that apocrine sweat glands were true apocrine glands, it is now known that they use merocrine excretion. However, they have retained the original name", source="Wikipedia"} ! merocrine gland
+disjoint_from: UBERON:0000423 ! eccrine sweat gland
+relationship: part_of UBERON:0001003 {source="FMA"} ! epidermis
property_value: never_in_taxon NCBITaxon:9822 {source="http://www.nal.usda.gov/awic/pubs/swine/swine.htm"}
[Term]
@@ -5096,8 +5100,12 @@ is_a: UBERON:0000488 ! atypical epithelium
[Term]
id: UBERON:0000423
name: eccrine sweat gland
+def: "An ordinary, or simple, sweat gland; they are of the merocrine type, unbranched, coiled, tubular glands that are distributed over almost all of the body surface, and promote cooling by evaporation of their secretion." [BTO:0002323, Wikipedia:Eccrine_sweat_gland]
subset: organ_slim
-synonym: "eccrine gland" EXACT [FMA:59154]
+synonym: "eccrine gland" RELATED [FMA:59154]
+synonym: "glandula sudorifera eccrina" EXACT LATIN [Wikipedia:Eccrine_sweat_gland]
+synonym: "glandula sudorifera merocrina" EXACT LATIN [Wikipedia:Eccrine_sweat_gland]
+synonym: "merocrine sweat gland" RELATED []
xref: BTO:0002323
xref: FMA:59154
xref: GAID:945
@@ -5105,6 +5113,8 @@ xref: MESH:A10.336.899.480
xref: ncithesaurus:Eccrine_Sweat_Gland
xref: SCTID:361699008
is_a: UBERON:0001820 ! sweat gland
+is_a: UBERON:0010243 {source="BTO"} ! merocrine gland
+relationship: part_of UBERON:0001003 {source="FMA"} ! epidermis
[Term]
id: UBERON:0000424
@@ -16462,7 +16472,7 @@ property_value: external_definition "The lesser sac of the peritoneum. Part of t
[Term]
id: UBERON:0001342
name: mesovarium
-def: "The mesentery that suspends the ovary from the dorsal wall of the coelom[VHOG]. The mesovarium is the portion of the broad ligament of the uterus that covers the ovaries. At first the mesonephros and genital ridge are suspended by a common mesentery, but as the embryo grows the genital ridge gradually becomes pinched off from the mesonephros, with which it is at first continuous, though it still remains connected to the remnant of this body by a fold of peritoneum. In the male this is the mesorchium, and in the female, this is the mesovarium. [WP,unvetted]." [VHOG:0001566, Wikipedia:Mesovarium]
+def: "The mesentery that suspends the ovary from the dorsal wall of the coelom[VHOG]." [VHOG:0001566, Wikipedia:Mesovarium]
subset: uberon_slim
subset: vertebrate_core
synonym: "mesovarian ligament" RELATED []
@@ -16480,6 +16490,7 @@ is_a: UBERON:0002095 ! mesentery
is_a: UBERON:0005156 ! reproductive structure
relationship: part_of UBERON:0000992 ! female gonad
relationship: part_of UBERON:0002095 ! mesentery
+relationship: part_of UBERON:0012332 ! broad ligament of uterus
property_value: external_definition "Anatomical structure consisting of a membrane which suspends the ovaries from the mesial side of the kidney.[AAO]" xsd:string {date_retrieved="2012-06-20", external_class="AAO:0010531", ontology="AAO", source="AAO:BJB"}
property_value: external_definition "The mesentery that suspends the ovary from the dorsal wall of the coelom. [Evolution, Fourth_Edition_(2006)_McGraw-Hill, Function, Vertebrates:_Comparative_Anatomy, p.560, see_Kardong_KV][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0001566", ontology="VHOG", source="http://bgee.unil.ch/"}
@@ -18911,7 +18922,6 @@ property_value: has_relational_adjective "facial" xsd:string
id: UBERON:0001457
name: skin of eyelid
def: "A zone of skin that is part of a eyelid [Obol]." [OBOL:automatic]
-comment: This class was created automatically from a combination of ontologies
synonym: "blepharon zone of skin" EXACT [OBOL:automatic]
synonym: "eyelid skin" EXACT []
synonym: "eyelid zone of skin" EXACT [OBOL:automatic]
@@ -24690,7 +24700,8 @@ xref: ncithesaurus:Eyelid
xref: OpenCyc:Mx4rvVi4m5wpEbGdrcN5Y29ycA
xref: SCTID:265782007
xref: VHOG:0000016
-is_a: UBERON:1000021 ! skin of face
+is_a: UBERON:0000064 ! organ part
+is_a: UBERON:0004121 ! ectoderm-derived structure
relationship: part_of UBERON:0000019 {source="multiple"} ! camera-type eye
property_value: has_relational_adjective "palpebral" xsd:string
@@ -25261,6 +25272,7 @@ xref: MESH:A15.382.520.604.084
xref: ncithesaurus:Pharyngeal_Tonsil
xref: SCTID:181199001
is_a: UBERON:0002372 ! tonsil
+is_a: UBERON:0012330 ! nasal-associated lymphoid tissue
relationship: part_of UBERON:0001728 ! nasopharynx
[Term]
@@ -27317,8 +27329,9 @@ name: tarsal gland
def: "The meibomian glands (or tarsal glands) are a special kind of sebaceous glands at the rim of the eyelids, responsible for the supply of sebum, an oily substance that prevents evaporation of the eye's tear film, prevents tear spillage onto the cheek, and makes the closed lids airtight. There are approximately 50 glands on the upper eyelids and 25 glands on the lower eyelids. The glands are named after Heinrich Meibom (1638-1700), a German physician. [WP,unvetted]." [Wikipedia:Meibomian_gland]
subset: organ_slim
subset: uberon_slim
-synonym: "gland of meibom" EXACT []
-synonym: "meibomian gland" EXACT []
+synonym: "gland of Meibom" EXACT []
+synonym: "glandula tarsales" EXACT []
+synonym: "Meibomian gland" EXACT []
synonym: "palpebral gland" RELATED []
xref: BTO:0004165
xref: FMA:59104
@@ -27381,8 +27394,8 @@ property_value: homology_notes "Sweat glands (also called sudoriferous glands) a
[Term]
id: UBERON:0001821
name: sebaceous gland
-def: "The sebaceous glands are microscopic glands in the skin which secrete an oily/waxy matter, called sebum, to lubricate the skin and hair of animals. [WP,unvetted]." [Wikipedia:Sebaceous_gland]
-comment: Editor notes: check parthood relations
+def: "A holocrine gland that secretes sebum into the hair follicles, or in hairless areas into ducts.[MP]." [MP:0000647, Wikipedia:Sebaceous_gland]
+comment: Usage notes: sebaceous glands are also found in glabrous areas of eyelids, nose, penis, labia minora and nipples, and do not always secrete into hair follices. This causes some confusion in classification. In addition some structures, such as preputial glands are sometimes called 'modified' sebaceous glands, implying a non-subclass relationship. we follow MP and MA in keeping this class generic and creating a distinct subclass for sebaceuous glands of the skin. The FMA class may be better placed under this subclass.
subset: organ_slim
subset: uberon_slim
synonym: "glandula sebacea" RELATED LATIN [Wikipedia:Sebaceous_gland]
@@ -27401,10 +27414,11 @@ xref: SCTID:361697005
xref: VHOG:0001468
is_a: UBERON:0002365 ! exocrine gland
is_a: UBERON:0007771 ! epidermis gland
+is_a: UBERON:0012344 {source="Wikipedia"} ! holocrine gland
relationship: develops_from UBERON:0005088 {evidence="definitional"} ! sebaceous gland placode
-relationship: part_of UBERON:0001003 {source="FMA", inconsistent_with="MP"} ! epidermis
+relationship: part_of UBERON:0001003 {source="FMA", inconsistent_with="BTO"} ! epidermis
relationship: part_of UBERON:0002330 ! exocrine system
-relationship: part_of UBERON:0011932 {source="FMA"} ! pilosebaceous unit
+relationship: part_of UBERON:0006003 ! skin adnexa
property_value: external_definition "Any of the numerous holocrine glands in the dermis that empty into a hair follicle and produce and secrete sebum. [TFD][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0001468", ontology="VHOG", source="http://bgee.unil.ch/", source="http://medical-dictionary.thefreedictionary.com/sebaceous+gland"}
property_value: homology_notes "Sebaceous glands are also limited to mammals.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0001468", ontology="VHOG", source="ISBN:978-0471090588 Hildebrand M, Analysis of vertebrate structure (1983) p.102", source="http://bgee.unil.ch/"}
@@ -28429,14 +28443,13 @@ relationship: part_of UBERON:0001352 ! external acoustic meatus
[Term]
id: UBERON:0001866
name: sebum
-def: "The sebaceous glands are microscopic glands in the skin which secrete an oily/waxy matter, called sebum, to lubricate the skin and hair of animals. [WP,unvetted]." [Wikipedia:Sebum]
-comment: This class was created automatically from a combination of ontologies
+def: "Fatty lubricant matter secreted by sebaceous glands, and made of made of triglyceride oils, wax, squalene, and metabolytes of fat-producing cells[BTO,WP]." [BTO:0001981, Wikipedia:Sebaceous_glands#Sebum]
+comment: The composition of sebum varies across species. In humans, the lipid content is as follows: 25% wax monoesters, 41% triglycerides, 16% free fatty acids, 12% squalene; Sapienic acid is a sebum fatty acid that is unique to humans.
subset: uberon_slim
xref: BTO:0001981
xref: ENVO:02000037
xref: FMA:61304
xref: GAID:1168
-xref: http://upload.wikimedia.org/wikipedia/commons/thumb/4/49/HairFollicle.png/200px-HairFollicle.png
xref: MA:0002538
xref: MESH:A12.200.702
xref: ncithesaurus:Sebum
@@ -41078,29 +41091,17 @@ name: pes
def: "distal portion of the hind limb, including tarsal region, metatarsal region and digits." [Wikipedia:Foot, Wikipedia:Pes_(anatomy)]
comment: Editors note: consider renaming using less human-centric terminology
subset: uberon_slim
-synonym: "autopod of hind limb" EXACT [OBOL:automatic]
-synonym: "autopod of hindlimb" EXACT [OBOL:automatic]
-synonym: "autopod of inferior member" EXACT [OBOL:automatic]
-synonym: "autopod of lower extremity" EXACT [OBOL:automatic]
-synonym: "distal free limb segment of hind limb" EXACT [OBOL:automatic]
-synonym: "distal free limb segment of hindlimb" EXACT [OBOL:automatic]
-synonym: "distal free limb segment of inferior member" EXACT [OBOL:automatic]
-synonym: "distal free limb segment of lower extremity" EXACT [OBOL:automatic]
synonym: "foot" EXACT [MA:0000044]
-synonym: "hind limb autopod" EXACT [OBOL:automatic]
+synonym: "hind foot" NARROW []
synonym: "hind limb autopodium" RELATED [VHOG:0000350]
-synonym: "hind limb distal free limb segment" EXACT [OBOL:automatic]
synonym: "hind paw" NARROW SENSU [EMAPA:17428, OBOL:automatic]
synonym: "hind-paw" NARROW SENSU [EMAPA:17428]
+synonym: "hindfoot" NARROW []
+synonym: "hindfoot of quadruped" NARROW []
synonym: "hindlimb autopod" EXACT [OBOL:automatic]
synonym: "hindlimb autopodium" EXACT [OBOL:automatic]
synonym: "hindlimb distal free limb segment" EXACT [OBOL:automatic]
-synonym: "inferior member autopod" EXACT [OBOL:automatic]
-synonym: "inferior member distal free limb segment" EXACT [OBOL:automatic]
-synonym: "lower extremity autopod" EXACT [OBOL:automatic]
-synonym: "lower extremity distal free limb segment" EXACT [OBOL:automatic]
synonym: "pes" EXACT [UBERON:cjm]
-synonym: "pes" RELATED LATIN [Wikipedia:Foot]
synonym: "terminal segment of free lower limb" EXACT []
xref: BTO:0000476
xref: EFO:0003065
@@ -41423,8 +41424,11 @@ name: manus
def: "distal segment of the fore limb, including carpal region, metacarpal region and digits." [Wikipedia:Hand, Wikipedia:Manus_(anatomy)]
comment: Usage notes: like all limb segments, this class encompasses both the unformed hand region of the embryo to the fully formed structure complete with skeleton
subset: uberon_slim
+synonym: "fore foot" NARROW INCONSISTENT []
synonym: "fore paw" NARROW SENSU [EMAPA:17428, OBOL:automatic]
synonym: "fore-paw" NARROW SENSU [EMAPA:17428]
+synonym: "forefoot" NARROW INCONSISTENT []
+synonym: "forefoot of quadruped" NARROW []
synonym: "forelimb autopod" EXACT [OBOL:automatic]
synonym: "forelimb autopodium" EXACT [OBOL:automatic]
synonym: "hand" EXACT [MA:0000037]
@@ -60567,7 +60571,7 @@ synonym: "sebaceous gland of camera-type eye" EXACT [OBOL:automatic]
synonym: "sebaceous gland of vertebrate eye" EXACT [OBOL:automatic]
synonym: "vertebrate eye sebaceous gland" EXACT [OBOL:automatic]
xref: MA:0002452
-is_a: UBERON:0001821 ! sebaceous gland
+is_a: UBERON:0003487 {source="MA"} ! skin sebaceous gland
is_a: UBERON:0003605 ! eye skin gland
relationship: part_of UBERON:0000019
relationship: part_of UBERON:0000019 ! camera-type eye
@@ -60588,7 +60592,7 @@ relationship: part_of UBERON:0000996 ! vagina
[Term]
id: UBERON:0003486
name: mammary gland sebaceous gland
-def: "A sebaceous gland that is part of a lactiferous gland [Obol]." [OBOL:automatic]
+def: "A sebaceous gland that is part of a mammary gland [Obol]." [OBOL:automatic]
subset: organ_slim
synonym: "lactiferous gland sebaceous gland" EXACT [OBOL:automatic]
synonym: "lobe of breast sebaceous gland" EXACT [OBOL:automatic]
@@ -60606,11 +60610,14 @@ relationship: part_of UBERON:0001911 ! mammary gland
[Term]
id: UBERON:0003487
name: skin sebaceous gland
-comment: Editor notes: consider merging into parent, or explicitly stating criteria that differentiates this from other sebaceuous glands
+def: "A holocrine gland of the dermis that secretes sebum into hair follicles." [MP:0009535]
+synonym: "cutaneous sebaceous gland" EXACT []
synonym: "sebaceous gland of skin" EXACT [OBOL:automatic]
xref: MA:0000149
+xref: SCTID:115977007
is_a: UBERON:0001821 ! sebaceous gland
relationship: part_of UBERON:0002097 ! skin of body
+relationship: part_of UBERON:0011932 {source="FMA"} ! pilosebaceous unit
[Term]
id: UBERON:0003488