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1 parent 2177e5b commit ec267bae5bdaffe23b4e98dcfe8042b1c098a0a6 @cmungall cmungall committed Sep 19, 2012
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518 Makefile
@@ -208,29 +208,6 @@ subsets/circulatory-minimal.obo: uberon.owl
multi_closure-ontol_db.pro: merged.obo
owltools $< http://purl.obolibrary.org/obo/ma.owl http://purl.obolibrary.org/obo/ehdaa2.owl http://purl.obolibrary.org/obo/xao.owl http://purl.obolibrary.org/obo/zfa.owl http://purl.obolibrary.org/obo/fbbt.owl http://purl.obolibrary.org/obo/wbbt.owl cl-core.obo --save-closure-for-chado --chain $@.tmp && cut -f1,2,4 $@.tmp | perl -npe 's/OBO_REL:is_a/subclass/' | tbl2p -p parentT > $@
-# ----------------------------------------
-# Ontology subsetting and rewriting
-# ----------------------------------------
-
-efo_anat.obo:
- blip -r efo ontol-subset -query "subclassRT(ID,'EFO:0000635')" -to obo > $@.tmp && mv $@.tmp $@
-
-# note that this is now partly hand-edited
-emapaa.obo:
- blip-ddb -debug index -r emapa -consult fix_emapa.pro -goal ix,rewrite io-convert -to obo -o $@
-
-emapaa-inferred.obo: emapaa.obo
- owltools $< uberon.owl mod/uberon-bridge-to-emapa.owl --merge-support-ontologies --run-reasoner -r elk --assert-implied -o -f obo $@
-
-emapaa-remainder.obo: emapaa-inferred.obo
- obo-grep.pl -r 'id: (EMAPA|part_of)' $< > $@
-
-# -----
-
-sao.obo:
- blip -r sao -u ontol_manifest_metadata_from_sao io-convert -to obo -o $@
-
-.PRECIOUS: %obo
@@ -244,6 +221,7 @@ sao.obo:
# used for (obsolete) disjointness checks
+# historic
%-with-isa.obo: %-xf.obo
blip -i $*.obo -u ontol_manifest_has_subclass_from_xref io-convert -to obo -o $@
.PRECIOUS: %-with-isa.obo
@@ -283,7 +261,7 @@ pr-core.obo: PRO.obo
#composites: composite-metazoan.owl composite-vertebrate.owl composite-mammal.owl
composites: composite-metazoan.owl composite-vertebrate.owl
-METCACHE= metazon_glommed_closure-ontol_db.pro
+METCACHE= metazoan_glommed_closure-ontol_db.pro
# TODO: ensure treat-xrefs in merged
composite-xenopus.obo: merged.obo
@@ -302,11 +280,15 @@ composite-metazoan.obo: merged.obo $(METCACHE)
blip-ddb -consult util/merge_species.pro -debug merge -debug index -i $< -i cl-core.obo -r ZFA -r MA -r EHDAA2 -r XAO -r FBbt -i $(METCACHE) -goal "rewrite_all('uberon/composite-metazoan')" io-convert -to obo > $@
.PRECIOUS: composite-metazoan.obo
-metazon_glommed.obo: merged.obo
+metazoan_glommed.obo: merged.obo
blip io-convert -debug index -i $< -i cl-core.obo -r ZFA -r MA -r EHDAA2 -r XAO -r FBbt -to obo | egrep -v '^(synonym|def|subset|xref|namespace|comment):' > $@.tmp && mv $@.tmp $@
# closures of individual ontologies, but not connections between them
+# ----------------------------------------
+# COMPOSITES
+# ----------------------------------------
+
composite-mammal.owl: composite-mammal.obo
obolib-obo2owl --allow-dangling -o $@ $<
composite-metazoan.owl: composite-metazoan.obo
@@ -335,6 +317,7 @@ composite-vertebrate.owl: composite-vertebrate.obo
uberon_edit_plus_%-implied.obo: uberon_edit.obo
obo2obo -allowdangling -o -saveimpliedlinks -allowdangling $@ $*.obo $<
+# NOTE: we should be able to replace these with oort now
%-cycles: %.obo
# owltools --no-debug $< --list-cycles -f > $@
blip-findall -i $< "subclass_cycle/2" -label > $@
@@ -346,22 +329,10 @@ uberon_edit_plus_%-implied.obo: uberon_edit.obo
%-synclash: %.obo
blip-findall -r goxp/biological_process_xp_uber_anatomy -u query_obo -i $< "same_label_as(X,Y,A,B,C),X@<Y,class_refcount(X,XC),class_refcount(Y,YC)" -select "same_label_as(X,Y,A,B,C,XC,YC)" -label > $@
-%-xpmatches: %.obo
- blip-findall -u query_obo -i $< "differentium(A,R,X),differentium(B,R,X),A\=B,class_cdef(A,D),class_cdef(B,D),class_refcount(A,AC),class_refcount(B,BC)" -select "x(A,B,AC,BC)" -label
-
-# these should be all false positives from string matching
-uberon-anat-matches.txt:
- blip-findall -i uberon-with-isa-mireot.obo -index "metadata_db:entity_label(1,1)" "same_label_as(A,B),\+id_idspace(A,'UBERON'),\+id_idspace(B,'UBERON'),\+((entity_xref(U,A),entity_xref(U,B)))" -select A-B -label > $@
-
-uberon-nonobvious-matches.txt:
- blip-findall -r fma_downcase -i uberon-with-isa-mireot.obo -index "metadata_db:entity_label(1,1)" "entity_xref(U,A),entity_xref(U,B),A@<B,entity_label(A,_),entity_label(B,_),\+((entity_label_or_synonym(A,N),entity_label_or_synonym(B,N))),id_idspace(U,'UBERON'),id_idspace(A,AX),id_idspace(B,BX),BX\=AX" -select A-B -label > $@
-
-uberon-dv2.txt: uberon.obo
- blip -import_all -i uberon-imports-full.obo -u query_anatomy findall xref_disjoint_violation/5 > $@.tmp && sort -u $@.tmp > $@
-
-#%-dv.txt: %.obo
-# blip -i $< -u query_obo findall disjointness_violationNR/3 > $@.tmp && sort -u $@.tmp > $@
+#%-xpmatches: %.obo
+# blip-findall -u query_obo -i $< "differentium(A,R,X),differentium(B,R,X),A\=B,class_cdef(A,D),class_cdef(B,D),class_refcount(A,AC),class_refcount(B,BC)" -select "x(A,B,AC,BC)" -label
+# NOTE: all this should be doable in Elk now
CARO_ONTS=PO FBbt HAO TAO ZFA XAO TADS TGMA SPD
all-caro-dv: $(patsubst %,caro-dv-%.txt,$(CARO_ONTS))
all-caro-usage: $(patsubst %,caro-usage-%.txt,$(CARO_ONTS))
@@ -377,48 +348,6 @@ caro-usage-%.txt:
%-cmt.obo: %.obo
obo-add-comments.pl -t xref -t intersection_of uberon_edit.obo animal_gross_anatomy/*/*.obo ../cell_type/cell.obo ../caro/caro.obo MIAA.obo animal_gross_anatomy/*/*/*.obo ~/cvs/fma-conversion/fma2/fma2.obo gemina_anatomy.obo birnlex_anatomy.obo NIF-GrossAnatomy.obo hao.obo HOG.obo efo_anat.obo $< > $@
-# Induction of links from sources
-links-uberon-fma.txt:
- blip -debug anatomy -r fma_simple -r uberonp -u query_obo -table_pred parent_by_xref/4 findall "parent_by_xref_nr(uberon,_,_,_)" -label > $@.tmp && cut -f3-8 $@.tmp | sort -u > $@
-
-links-uberon-%.txt:
- blip -debug anatomy -r $* -r uberonp -u query_obo -table_pred parent_by_xref/4 findall "parent_by_xref_nr_g(uberon,_,_,_,_)" -label > $@.tmp && cut -f3-8 $@.tmp | sort -u > $@
-
-subclass-uberon-fma-birnlex.pro:
- blip -i uberon_edit.obo -r fma2 -i birnlex_anatomy.obo -u query_obo findall -write_prolog -select "ontol_db:subclass(A,B)" "subclass_by_xref_confirmed(uberon,A,B)" > $@.tmp && cut -f3-5 $@.tmp | sort -u > $@
-
-subclass-uberon-fma-cell.pro:
- blip -i uberon_edit.obo -r fma2 -r cell -u query_obo findall -write_prolog -select "ontol_db:subclass(A,B)" "subclass_by_xref_confirmed(uberon,A,B)" > $@.tmp && cut -f3-5 $@.tmp | sort -u > $@
-
-subclass-uberon-zebrafish-cell.pro:
- blip -i uberon_edit.obo -r zebrafish_anatomy -r cell -u query_obo findall -write_prolog -select "ontol_db:subclass(A,B)" "subclass_by_xref_confirmed(uberon,A,B)" > $@.tmp && cut -f3-5 $@.tmp | sort -u > $@
-
-subclass-uberon-fma-zebrafish.pro:
- blip -i uberon_edit.obo -r fma2 -r zebrafish_anatomy -u query_obo findall -write_prolog -select "ontol_db:subclass(A,B)" "subclass_by_xref_confirmed(uberon,A,B)" > $@.tmp && cut -f3-5 $@.tmp | sort -u > $@
-
-subclass-uberon-xenopus-zebrafish.pro:
- blip -i uberon_edit.obo -r xenopus_anatomy -r zebrafish_anatomy -u query_obo findall -write_prolog -select "ontol_db:subclass(A,B)" "subclass_by_xref_confirmed(uberon,A,B)" > $@.tmp && cut -f3-5 $@.tmp | sort -u > $@
-
-subclass-uberon-%.obo: subclass-uberon-%.pro
- blip -i $< io-convert -to obo -o $@
-
-subclass-uberon-%-merged.obo: subclass-uberon-%.obo
- obo-merge-tags.pl -t is_a uberon_edit.obo $< > $@
-
-# re-routes is_a links
-# supersedes the above?
-move-uberon-%-diff.pro: uberon_edit.obo
- blip -i uberon_edit.obo -r $* -u query_obo findall 'xrefmove(C,P,P2)' -select "(retract(ontol_db:subclass(C,P)),assert(ontol_db:subclass(C,P2)))" -write_prolog > $@
-move-uberon-%.obo: move-uberon-%-diff.pro
- blip-ddb -i uberon_edit.obo -goalfile $< io-convert -to obo -o $@
-
-add-df-uberon-%-diff.pro: uberon_edit.obo
- blip -r implied/uberon_edit.obo -r $* -u query_obo findall 'xrefaddR(develops_from,C,P)' -select "assert(ontol_db:restriction(C,develops_from,P))" -write_prolog > $@
-add-df-uberon-%.obo: add-df-uberon-%-diff.pro
- blip-ddb -i uberon_edit.obo -goalfile $< io-convert -to obo -o $@
-
-birnlex_anatomy.obo:
- blip -u ontol_manifest_metadata_from_birnlex -r birnlex_anatomy io-convert -to obo -o $@
abstract-%-diff.pro:
blip -r $* -u query_anatomy findall 'fix_ehdaa(C,N,N2)' -select "(retract(metadata_db:entity_label(C,N)),assert(metadata_db:entity_label(C,N2)))" -write_prolog > $@
@@ -427,58 +356,7 @@ abstract-%-diff.pro:
abstract-%.obo: abstract-%-diff.pro
blip-ddb -r $* -goalfile $< io-convert -to obo -o $@
-# DEPRECATED
-fma_s.obo:
- blip -u ontol_manifest_synonym_from_fma -r fma2 io-convert -to obo -o $@.tmp && ./downcase-obo.pl $@.tmp > $@
-
-birnlex_anatomy_s.obo: nif_anatomy.obo
- blip -u ontol_manifest_synonym_from_birnlex_anatomy.pro -i $< io-convert -to obo -o $@
-
-mesh_anatomy.obo: mesh.obo
- blip -table_pred ontol_db:subclassT/2 ontol-query -i $< -query "subclassT(ID,'MESH:A')" -to obo > $@
-
-uberon-grep-go.pro:
- obol -r obol_av -debug obol -u onto_grep -i uberon_edit.obo -r go onto-grep -optimize -query "belongs(ID,biological_process)" > $@.tmp && mv $@.tmp $@
-
-align-uberon-strict-%.obo:
- obol -goal "consult('ignore_word_adult.pro')" -u onto_grep -r $* -i uberon_edit.obo onto-exact-align -ont2 uberon -exclude_xref_strict -exclude_xref -disp 'format(obo)' > $@.tmp && mv $@.tmp $@
-.PRECIOUS: align-uberon-%.obo
-
-align-uberon-%.obo:
- obol -goal "consult('ignore_word_adult.pro')" -u onto_grep -r $* -i uberon_edit.obo onto-exact-align -ont2 uberon -exclude_xref_strict -exclude_xref -disp 'allow(related)' -disp 'allow(narrow)' -disp 'allow(broad)' -disp 'format(obo)' > $@.tmp && mv $@.tmp $@
-.PRECIOUS: align-uberon-%.obo
-
-# get synonyms from sources
-syns-uberon-%.obo:
- blip -r $* -r uberon -i fetchsyns.pro -goal write_syns,halt > $@
-
-#uberon-go-defs.txt:
-# blip -r go $(GO_XP_ARGS) -u ontol_db findall "belongs(X,uberon),differentium(Y,_,X),def(Y,D),belongs(Y,biological_process),(\+ def(X,_) ; def(X,'.'))" -select "td(X,Y,D)" -label > $@.tmp && sort -u $@.tmp > $@
-
-#%-syns.obo: %.obo
-# obol -debug obol -i $< -u obol_anat_xpgen obol-generate-synonyms -query "id_idspace(ID,'UBERON'),genus(ID,_)" > $@.tmp && mv $@.tmp $@
-
-%-defs.obo: %.obo
- obol -debug obol -r pato -i $< -u obol_anat_xpgen obol-generate-textdefs -idspace UBERON > $@.tmp && mv $@.tmp $@
-
-
-# --
-# creation of classes based on xps in external ontologies
-# --
-
-# use this:
-newxp-%-u-ontol_db.pro:
- blip -r $* -i uberon_edit.obo -u query_anatomy findall "uberon_xp(Fact)" -select Fact -write_prolog > $@.tmp && sort -u $@.tmp > $@
-.PRECIOUS: newxp-%-ontol_db.pro
-
-# use this:
-newxp-%-ontol_db.pro:
- blip -r $* -i $*_xp.obo -i uberon_edit.obo -u query_anatomy findall "uberon_xp(Fact)" -select Fact -write_prolog > $@.tmp && sort -u $@.tmp > $@
-.PRECIOUS: newxp-%-ontol_db.pro
-
-newxp-%-ontol_db.obo: newxp-%-ontol_db.pro
- blip -i $< -f ontol_db:pro io-convert -to obo -o $@
#
@@ -523,107 +401,11 @@ nif_subcellular.obo:
nif_cell.obo:
blip -i http://ontology.neuinfo.org/NIF/BiomaterialEntities/NIF-Cell.owl -f thea2_owl -import_all io-convert -to obo -u ontol_manifest_metadata_from_nif_via_thea -o $@.tmp && ./nif-downcase-obo.pl $@.tmp > $@
-nif_anatomy_xp.obo: nif_anatomy.obo
- obol -i $< -table_pred user:gross_anatomical/3 -table_pred user:gross_anatomical5/3 -table_pred classdef_parser:any_kind_of/3 -table_pred ontol_db:subclassT/2 -u obol_nif_anatomy_xp -r obol_av obol-parse -parse_rule anatomical_continuant "belongs(ID,birnlex_anatomy)" >& $@.tmp && mv $@.tmp $@
-
-nif_subcellular_xp.obo: nif_subcellular.obo
- obol -i $< -i nif_cell.obo -table_pred user:gross_anatomical/3 -table_pred user:anatomical_continuant5/3 -table_pred classdef_parser:any_kind_of/3 -table_pred ontol_db:subclassT/2 -u obol_nif_subcellular_xp -r obol_av obol-parse -parse_rule anatomical_continuant "class(ID),id_idspace(ID,'NIF_Subcellular')" >& $@.tmp && mv $@.tmp $@
-
-
-EMAPAx-1.obo: EMAPA.obo
- blip -u emapa -i $< io-convert -to obo -o $@
-.PRECIOUS: EMAPAx-1.obo
-
-
-EMAPAx-2.obo: EMAPAx-1.obo
- obo-sed.pl -r intersection_of 's/\nname: .*//' $< | obo-sed.pl -r 'namespace: emapax' 's/id: EMAPA:(.*)/id: EMAPA:$$1\nname: $$1/' > $@
-
-
-%-inf.txt: %.obdr
- ./mk-obd-inf.sh $* $(IDSPACE) > $@
-.PRECIOUS: %-inf.txt
-%-inf.pro: %-inf.txt
- tbl2p -p inf $< > $@
-.PRECIOUS: %-inf.pro
-
-%xp-truepos.txt: %xp-inf.pro
- blip -i $< -i $*.obo -u ontol_db findall "(inf(X,Y),subclassT(X,Y))" -select "recap(X,Y)" -label > $@.tmp && sort -u $@.tmp > $@
-%xp-falseneg.txt: %xp-inf.pro
- blip -i $< -i $*.obo -i $*_xp.obo -u ontol_db findall "(genus(X,_),subclass(X,Y),genus(Y,_),\+inf(X,Y))" -select "problem(X,Y)" -label > $@.tmp && sort -u $@.tmp > $@
-%xp-novel.txt: %xp-inf.pro
- blip -i $< -i $*.obo -u ontol_db findall "(inf(X,Y),\+subclassT(X,Y),\+inf(Y,X),\+((inf(X,Z),inf(Z,Y))))" -select "novel(X,Y)" -label > $@.tmp && sort -u $@.tmp > $@
-%xp-novel-filtered.txt: %xp-novel.txt
- perl -ne 'print unless /\d\n/' $< > $@
-%xp-equiv.txt: %xp-inf.pro
- blip -i $< -i $*.obo -u ontol_db findall "(inf(X,Y),X@<Y,inf(Y,X))" -select "equiv(X,Y)" -label > $@.tmp && sort -u $@.tmp > $@
organ_association.txt:
wget http://bgee.unil.ch/download/organ_association.txt
-fma-mireot.obo: fma_xp.obo
- blip -i $< -r fma_simple ontol-subset -rel subclass -rel part_of -query "differentium(_,_,ID);genus(_,ID)" -to obo > $@.tmp && mv $@.tmp $@
-.PRECIOUS: fma-mireot.obo
-
-# -- CROSS-SPECIES MAPPINGS
-
-MAP_ONTS = ZFA MA EHDAA EHDAA2 EMAPA FBbt XAO AAO FMA NIF_GrossAnatomy
-all-uberon-map: $(patsubst %,uberon-map-from-%.tbl,$(MAP_ONTS))
-uberon-map-from-FMA.tbl: uberon.obo
- blip -r cell -r uberonp -r fma3 -consult make_mapping_table.pro findall "bestmatch('FMA',_,_,_,_,_)" -label -use_tabs -no_pred > $@
-uberon-map-from-%.tbl: uberon.obo
- blip -r cell -r uberonp -r $* -consult make_mapping_table.pro findall "bestmatch('$*',_,_,_,_,_)" -label -use_tabs -no_pred > $@
-
-uberon-cl-from-%.tbl: uberon.obo
- blip -r cell -r uberonp -r $* -consult make_mapping_table.pro findall cl_anat_uniq/2 -label -use_tabs -no_pred > $@
-
-# --
-
-MAPARGS = -i exclude_cell.pro -u metadata_mappings -table_pred "ontol_db:bf_parentRT/2" -table_pred ontol_db:subclassT/2 -index "metadata_db:entity_label(1,1)" "compare_mapping([bp,uberon],_,_,_,_,_,_,_)" -label | cut -f3-12
-
-mappings-FMA-MA.cmp: mappings-FMA-MA.rdf
- blip-findall -r uberon -r mouse_anatomy -r fma -i mappings-FMA-MA.rdf $(MAPARGS) > $@
-
-mappings-FMA-FBbt.cmp: mappings-FMA-MA.rdf
- blip-findall -r uberon -r fly_anatomy -r fma -i mappings-FMA-FBbt.rdf $(MAPARGS) > $@
-
-mappings-ZFA-MA.cmp: mappings-ZFA-MA.rdf
- blip-findall -r uberon -r mouse_anatomy -r zebrafish_anatomy -i mappings-ZFA-MA.rdf $(MAPARGS) > $@
-
-mappings-%-mismatch.cmp: mappings-%.cmp
- grep -v EXACT $< > $@
-
-mappings-%-overlap: mappings-%.cmp
- grep EXACT $< | grep '^uberon' | cut -f3-5 | sort -u
-
-mappings-%-u-pos: mappings-%.cmp
- grep -v EXACT $< | grep '^uberon' | cut -f3-5 | sort -u
-mappings-%-u-neg: mappings-%.cmp
- grep -v EXACT $< | grep -v '^uberon' | cut -f4-5 | sort -u
-
-# https://sourceforge.net/tracker/index.php?func=detail&aid=2998769&group_id=76834&atid=925065
-cell-to-uberon-via-ZFA.txt:
- blip-findall -r cell -r uberon -r zebrafish_anatomy "subclassRT(C,'ZFA:0009000'),entity_xref(C,X),id_idspace(X,'CL'),restriction(C,part_of,A),entity_xref(U,A)" -select "cell_anat(C,X,A,U)" -label | sort -u > $@
-
-cell-to-uberon-via-FMA.txt:
- blip-findall -r cell -r uberon -r fma_simple "subclassRT(C,'FMA:68646'),entity_xref(X,C),id_idspace(X,'CL'),restriction(C,part_of,A),entity_xref(U,A)" -select "cell_anat(C,X,A,U)" -label | sort -u > $@
-
-uberon2tax-ontol_db.pro:
- blip-findall -r uberon -r gotax -r goxp/biological_process_xp_uber_anatomy "restriction(X,only_in_taxon,T),differentium(X,_,U),id_idspace(U,'UBERON'),entity_label(U,_)" -select "restriction(U,only_in_taxon,T)" -write_prolog > $@
-
-# e.g. fma_xp-obol-gd-mismatch.txt
-# some of these will due to single inheritance dogma in FMA. e.g Bile duct
-%-gd-mismatch.txt: %.obo
- blip-findall -r fma -i $< "genus(X,G),\+subclassRT(X,G),subclass(X,Y)" -select "mm(X,G,Y)" -label
-
-uberon-go-xpdiff.txt:
- blip-findall -consult util/go_xp_check.pro -goal load xpdiff/9 -label > $@
-
-#uberon-go-mismatch.txt:
-# blip-findall -r go -r uberonp -r goxp/biological_process_xp_uber_anatomy "subclass(A,B),id_idspace(A,'GO'),class_cdef(A,AD),class_cdef(B,BD),BD=cdef(_,BDs),member(_=U,BDs),id_idspace(U,'UBERON'),class_cdef(B,BD),\+subclassX(A,BD)" -select A-B -label > $@
-
-uberon-go-inflinks.txt:
- blip-findall -r go -r uberonp -r goxp/biological_process_xp_uber_anatomy -i adhoc_uberon.pro "goxp_newlink(A,B)" -select A-B -label > $@
# ----------------------------------------
# TEXT MINING
@@ -723,231 +505,21 @@ df.txt:
new.txt:
blip-findall -i dbpedia_all.pro -r uberon -i adhoc_uberon.pro "dbpedia_new(C)" -select C > $@
-# deepen 'anatomical structure'
-suggest-isa-%.txt:
- blip-findall -r uberon -r $* "subclass(A,'UBERON:0000061'),entity_xref(A,AX),subclassT(AX,BX),entity_xref(B,BX),BX\='UBERON:0000061',\+((subclassT(AX,CX),subclassT(CX,BX),entity_xref(C,CX)))" -select A-B -label | perl -npe 's/-/ \! /g' > $@
-
-suggestions-HP-FMA.txt:
- blip-findall -r human_phenotype -r uberon -r human_phenotype_xp -r fma_simple "differentium(P,_,A),id_idspace(P,'HP'),id_idspace(A,'FMA'),\+entity_xref(_,A),\+((subclassRT(A,B),restriction(B,_,_)))" -select A-P -label | sort -u > $@
-
-# EMAP etc have implicit spatial disjointness
-%_sd-ontol_db.pro:
- blip-findall -r $* "restriction(X,part_of,A),restriction(Y,part_of,A),X\=Y" -select "restriction(X,spatially_disjoint_from,Y)" -write_prolog > $@
-
-%_sd-check.txt: %_sd-ontol_db.pro
- blip-findall -r implied/$* -index "ontol_db:restriction(1,0,1)" -i $< "restriction(X,spatially_disjoint_from,Y),restriction(A,part_of,X),restriction(A,part_of,Y)" -select "v(A,X,Y)" -label > $@
-
-hog-only.txt:
- blip-findall -r hog -r uberon "class(H),id_idspace(H,'HOG'),\+entity_xref(_,H)" -select H -label > $@
-
-hog-only-xref.txt:
- blip-findall -i organ_association.txt -r hog -r uberon "class(X),id_idspace(X,'HOG'),\+entity_xref(U,X),\+parentT(X,'HOG:0001533'),entity_label(X,XN),organ_association(Y,YN,X,_,_,_)" -select "x(X,XN,Y,YN)" > $@
-
-xog_xref_new.txt:
- blip-findall -r zebrafish_anatomy -r xenopus_anatomy -r mouse_anatomy -r fma_simple -i organ_association.txt -r hog -r uberon -i adhoc_uberon.pro hog_xref/3 -label > $@
-
-MULTIANAT_R=-r xenopus_anatomy -r mouse_anatomy -r gemina_anatomy -r amphibian_anatomy -r cell -r fly_anatomy -r zebrafish_anatomy -r fma_downcase -r brenda -r bila -r miaa -r nif_downcase -r emapa -r ehdaa -r ehdaa2 -r hog
-abduced-relations.txt:
- blip-findall -r implied/uberon.obo $(MULTIANAT_R) "entity_xref(A3,A1),id_idspace(A3,'UBERON'),restriction(A1,R1,B1),entity_xref(B3,B1),id_idspace(B3,'UBERON'),entity_xref(A3,A2),A2\=A1,restriction(A2,R2,B2),entity_xref(B3,B2),\+restriction(A3,_,B3)" -select "r(A3,B3,A1,R1,B1,A2,R2,B2)" -label > $@
-
-# ----------------------------------------
-# Phenotypes
-# ----------------------------------------
-fly_gene_phen_anat.txt:
- blip-findall -i flymine_gene_phenotype.txt -i adhoc_uberon.pro -r fly_anatomy fly_gene_phen_anat/4 > $@.tmp && sort -u $@.tmp > $@
-
-fly_gene_phen_uber.txt:
- blip-findall -debug index -i flymine_gene_phenotype.txt -i adhoc_uberon.pro -r fly_anatomy -r uberonp_with_isa -goal table_fly_gene_phen_uber fly_gene_phen_uber/4 > $@.tmp && sort -u $@.tmp > $@
-
-# phenotype_annotation.omim downloaded from human-phenotype-ontology.org
-human_gene_phen_anat.txt:
- blip-findall -debug index -r omim2gene -r fma -r human_phenotype_xp -index "metadata_db:entity_xref(1,1)" -r gene/9606 -i phenotype_annotation.txt -i adhoc_uberon.pro human_ensgene_anat/4 > $@.tmp && sort -u $@.tmp > $@
-
-HMD_HGNC_Accession.rpt:
- wget ftp://ftp.informatics.jax.org/pub/reports/HMD_HGNC_Accession.rpt
-
-mouse_gene_phen.txt:
- blip-findall -debug index -r gene/10090 -r mammalian_phenotype -index "metadata_db:entity_xref(1,1)" -i MGI_PhenoGenoMP.pro -i adhoc_uberon.pro mouse_gene_phen/4 > $@.tmp && sort -u $@.tmp > $@
-
-mouse_gene_phen_anat.txt:
- blip-findall -debug index -r gene/10090 -r mouse_anatomy -r mammalian_phenotype_xp -index "metadata_db:entity_xref(1,1)" -i MGI_PhenoGenoMP.pro -i adhoc_uberon.pro mouse_gene_anat/4 > $@.tmp && sort -u $@.tmp > $@
-
-zfin_gene_phen_anat.txt:
- cat zfin_gene_anatomy.txt | perl -npe 's/ZFIN://' > $@
-
-fly_human_gene_attr.pro: fly_gene_attr.pro human_gene_attr.pro
- cat fly_gene_attr.pro human_gene_attr.pro > $@
-
-mouse_human_gene_attr.pro: mouse_gene_attr.pro human_gene_attr.pro
- cat mouse_gene_attr.pro human_gene_attr.pro > $@
-
-mouse_zfin_gene_attr.pro: mouse_gene_attr.pro zfin_gene_attr.pro
- cat mouse_gene_attr.pro zfin_gene_attr.pro > $@
-
-%_gene_attr.pro: %_gene_phen_anat.txt
- cut -f2,4 $< | tbl2p -p gene_attr > $@
-
-zfin_mouse_orthos.txt:
- wget http://zfin.org/data_transfer/Downloads/mouse_orthos.txt
-
-mappings-FMA-MA-201009-concardance.txt:
- blip-findall -debug phenolog -debug index -goal index_gene_attr -r fma_simple -r mouse_anatomy -i mouse_human_gene_attr.pro -i HMD_HGNC_Accession.pro -i adhoc_uberon.pro -r gene/9606 -i mappings-FMA-MA-201009.rdf mapping_pheno_concordance/6 -label > $@
-
-mappings-ZFA-MA-201009-concardance.txt:
- blip-findall -debug phenolog -debug index -goal index_gene_attr -r zebrafish_anatomy -r mouse_anatomy -i mouse_zfin_gene_attr.pro -i mouse_orthos.pro -i adhoc_uberon.pro -i mappings-ZFA-MA-201009.rdf mapping_pheno_concordance/6 -label > $@
-
-mappings-FMA-FBbt-201009-concardance.txt:
- blip-findall -debug phenolog -debug index -goal index_gene_attr -r fma_simple -r fly_anatomy -i fly_human_gene_attr.pro -i flymine_fly_human_homologs.txt -i adhoc_uberon.pro -i mappings-FMA-FBbt-201009.rdf mapping_pheno_concordance/6 -label > $@
# ----------------------------------------
# BTO
# ----------------------------------------
bto-anat.obo:
blip ontol-query -r brenda -index "ontol_db:parentT(1,-,1)" -query "parentT(ID,'BTO:0000042'),\+((class(X,N),atom_concat(_,'cell line',N),parentT(ID,X)))" -to obo > $@
-# ----------------------------------------
-# Concordance (not strictly uberon-only)
-# ----------------------------------------
-
-human_gene_go.txt:
- blip-findall -debug index -index "metadata_db:entity_label_or_synonym(1,1)" -r go_assoc_local/goa_human -i adhoc_uberon.pro -r gene/9606 -r go human_ensgene_go/4 > $@.tmp && sort -u $@.tmp > $@
-mouse_gene_go.txt:
- blip-findall -debug index -index "metadata_db:entity_label_or_synonym(1,1)" -r go_assoc_local/mgi -i adhoc_uberon.pro -r go mouse_gene_go/4 > $@.tmp && sort -u $@.tmp > $@
-
-%_inst.obo: %.txt
- cut -f2-10 $< | tbl2instances.pl > $@
-
-mouse_go_phen_conc.txt: mouse_gene_go_inst.obo mouse_gene_phen_inst.obo
- blip-findall -debug phenolog -debug simmatrix -i mouse_gene_go_inst.obo -i mouse_gene_phen_inst.obo -r go -r mammalian_phenotype -u ontol_concordance "ontol_concordance_below('MP:0000001','GO:0023033')" > $@
-#mouse_go_phen_conc3.txt: mouse_gene_go_inst.obo mouse_gene_phen_inst.obo
-# blip-findall -debug index -index "ontol_db:inst_ofRT(1,0,1)" -table_pred ontol_db:parentT/3 -i mouse_gene_go_inst.obo -i mouse_gene_phen_inst.obo -r go -r mammalian_phenotype -u ontol_concordance "ontol_concordance_below('GO:0023052','MP:0000001')" > $@
-# blip-findall -i mouse_go_phen_conc3.txt -f pro -r go -r mammalian_phenotype "aggregate(min(P,X-C),ontol_concordance(X,Y,C,P),min(MinP,MinX-_))" -select "best(Y,MinX,MinP)" -label
-
-
-# ----------------------------------------
-# Methods (for paper)
-# ----------------------------------------
-
-uberon_class_taxon.txt:
- blip-findall -r implied/uberon.obo -r implied/ncbi_taxon_slim.obo -i adhoc_uberon.pro -goal index_lca_taxon class_covers_taxon/2 -label > $@
-
-uberon_class_taxon_min.txt:
- blip-findall -r implied/uberon.obo -r implied/ncbi_taxon_slim.obo -i adhoc_uberon.pro -goal index_lca_taxon class_covers_taxon_min/2 -label > $@
-# blip-findall -i $< -i ncbi_taxon_slim.obo "uberon_class_taxon(_,C,T),\+((uberon_class_taxon(_,C,T2),subclassT(T2,T)))" -select "class_taxon_min(C,T)" > $@
-
-%-count.txt: %.txt
- count-occ-group.pl 3 $< > $@
-
-missing-from-%.txt:
- blip-findall -r uberonp -r $* "class(X),\+id_idspace(X,'UBERON'),\+((entity_xref(U,X),id_idspace(U,'UBERON')))" -select X -label > $@
-
-
-# ----------------------------------------
-# NEW NEW MAPPINGS
-# ----------------------------------------
-
-MONTS = MA TADS HAO TGMA ZFA WBbt XAO FBbt AAO FMA EHDAA2 NIF_GrossAnatomy
-
-
-# simple: INTRA-ontology closure
-simple_closure-%-ontol_db.pro:
- blip-findall -r $* -i eval_mappings.pro "parentRT(X,R,Y),\+omit_class(Y),(R=subclass;R=part_of)" -select "parentRT(X,R,Y)" -write_prolog > $@.tmp && sort -u $@.tmp > $@ && rm $@.tmp
-
-all_simple_closure: $(patsubst %,simple_closure-%-ontol_db.pro,$(MONTS) uberonp)
-
-
-# simple concatenation between intra-ontology and intra-uberon (still no ssAO -> uberon)
-uberon_combined_simple_closure-%-ontol_db.pro: simple_closure-%-ontol_db.pro simple_closure-uberonp-ontol_db.pro
- cat $< simple_closure-uberonp-ontol_db.pro > $@
-.PRECIOUS: uberon_combined_simple_closure-%-ontol_db.pro
-
-# INTER-ontology
-# take results for intra-ssAO and intra-I and do relational join.
-# slow for U+FMA; indexing takes long time; so we do this from scratch. ignore non-mapped FMA classes
-partonomy-FMA-ontol_db.pro:
- blip-findall -r fma_simple "class(X),(Ax=subclass(X,_);Ax=restriction(X,part_of,Y)),Ax" -select Ax -write_prolog > $@.tmp && sort -u $@.tmp > $@ && rm $@.tmp
-partonomy-UBERON-ontol_db.pro:
- blip-findall -r uberonp_with_isa "class(X),(Ax=subclass(X,_);Ax=restriction(X,part_of,Y)),Ax" -select Ax -write_prolog > $@.tmp && sort -u $@.tmp > $@ && rm $@.tmp
-partonomy-%-ontol_db.pro:
- blip-findall -r $* "class(X),(Ax=subclass(X,_);Ax=restriction(X,part_of,Y)),Ax" -select Ax -write_prolog > $@.tmp && sort -u $@.tmp > $@ && rm $@.tmp
-
-uberon_simple_closure-FMA-ontol_db.pro: partonomy-FMA-ontol_db.pro partonomy-UBERON-ontol_db.pro
- blip-findall -i part_of.obo -i $< -i partonomy-UBERON-ontol_db.pro "setof(X,Y^parent(X,Y),Xs),member(X,Xs),id_idspace(X,'FMA'),parentRT(X,R,Y),id_idspace(Y,'UBERON')" -select "parentRT(X,R,Y)" -write_prolog > $@.tmp && sort -u $@.tmp > $@ && rm $@.tmp
-
-uberon_simple_closure-%-ontol_db.pro: uberon_combined_simple_closure-%-ontol_db.pro
- blip-findall -i $< -r uberonp -debug index -index "ontol_db:parentRT(1,0,1)" "entity_xref(U,X),id_idspace(U,'UBERON'),parentRT(C,R1,X),parentRT(U,R2,P),combine_relation_pair(R1,R2,R)" -select "parentRT(C,R,P)" -write_prolog > $@.tmp && sort -u $@.tmp > $@ && rm $@.tmp
-
-all_uberon_simple_closure: $(patsubst %,uberon_simple_closure-%-ontol_db.pro,$(MONTS))
-
-# don't index for FMA, takes too long...; experiment: just U classes
-#uberon_simple_closure-FMA-ontol_db.pro: simple_closure-uberonp-ontol_db.pro
-# blip-findall -i $< -r uberonp "entity_xref(U,X),id_idspace(X,'FMA'),id_idspace(U,'UBERON'),parentRT(U,R,P)" -select "parentRT(X,R,P)" -write_prolog > $@.tmp && sort -u $@.tmp > $@ && rm $@.tmp
-
-# this downloads bp_mappings-*.txt
-get_all_mappings: bp_anat_onts.txt
- ./get_all_mappings.pl bp_anat_onts.txt
-
-get_all_mappings_rdf: bp_anat_onts.txt
- ./get_all_mappings_rdf.pl bp_anat_onts.txt
-
-all_mappings_txt: $(patsubst %,bp_mappings-%.txt,$(MONTS))
-all_mappings_pro: $(patsubst %,bp_mappings-%.pro,$(MONTS))
-
-#bp_mappings-NIF_GrossAnatomy.txt: bp_mappings-NIF_GrossAnatomy.rdf
-# blip-findall -r fma -r nif_downcase -i $< -u metadata_mappings mapping/10 | cut -f2-12 > $@
-
-# this is not ideal, as there are mappings that dont use ids (e.g. Extensor_retinaculum_of_wrist)
-#bp_mappings-%.txt: bp_mappings-%.xml
-# ./bp_map2tbl.pl $< > $@
-
-mappings/bp_mappings-%.txt: mappings/bp_mappings-%.rdf
- blip-findall -i $< -consult maprdf2tbl -goal "load_onts('$*')" mapping/10 -no_pred > $@
-
-mappings/bp_mappings-%.pro: mappings/bp_mappings-%.txt
- tbl2p -p bp_mapping $< > $@
-
-mappings/summary-Full.html:
- ./make-mappings-table2.pl > $@
-
-mappings/summary-PR.html:
- ./make-mappings-table3.pl > $@
-
-uxrefs-ontol_db.pro: uberon.obo
- blip-findall -r uberonp entity_xref/2 > $@
-
-clear_eval_all:
- rm uberon_simple_closure-*-ontol_db.pro
-# rm uberon_simple_closure-*-*-ontol_db.pro
-
-#eval_all: all_uberon_simple_closure
-
-eval_all:
- ./run-all-eval2.pl $(MONTS)
-# ./run-all-eval.pl $(MONTS)
-
-eval_all_plus_summary: eval_all mappings/summary-Full.html mappings/summary-PR.html
-
-cp-dbx:
- cp mappings/*txt dbx/data/ && cp mappings/summary* dbx/
-
-re_eval_all: clear_eval_all eval_all
-
-all_templates: template-8782.txt
-template-%.txt:
- blip-findall -consult adhoc_uberon.pro -goal "load_taxslim,ix_taxslim" "class_in_taxon_slim(C,'NCBITaxon:$*',IsConf)" -label -use_tabs -no_pred > $@
# ----------------------------------------
# TAXON MODULES
# ----------------------------------------
# amniote = 32524
all_taxmods: uberon-taxmod-amniote.owl uberon-taxmod-aves.owl uberon-taxmod-euarchontoglires.owl
-#uberon-taxmod-amniote.ids: uberon.obo
-# blip-findall -table_pred ontol_db:subclassRT/2 -r taxslim -i uberon_edit.obo -i $< -consult adhoc_uberon.pro "class_in_taxon_slim(X,'NCBITaxon:32524')" -select X > $@
-
-#merged_anc-ontol_db.pro: merged_closure-ontol_db.pro
-# blip-findall -i $< parentRT/2 -write_prolog > $@.tmp && sort -u $@.tmp > $@
#TAXFILTER = owltools uberon.obo uberon_edit.obo ncbi_taxon_slim.obo --merge-support-ontologies --make-taxon-set -s UBERON
TAXFILTER = owltools merged.owl --merge-support-ontologies --make-taxon-set -s UBERON
@@ -982,10 +554,45 @@ uberon-taxmod-%.obo: uberon-taxmod-%.ids
# blip ontol-query -r uberonp -format "tbl(ids)" -i $< -to obo -query "ids(ID)" > $@.tmp && grep -v ^disjoint_from $@.tmp | grep -v 'relationship: spatially_disjoint' > $@
.PRECIOUS: uberon-taxmod-%.obo
+
+
# ----------------------------------------
-# PHENOSCAPE
+# RELEASE
# ----------------------------------------
+# even tho the repo lives in github, release is via svn...
+mod/bridges: mod/uberon-bridge-to-vhog.owl
+ cd mod && ../make-bridge-ontologies-from-xrefs.pl ../uberon_edit.obo
+mod/uberon-bridge-to-vhog.owl: uberon_edit.obo
+ ./util/mk-vhog-individs.pl organ_association_vHOG.txt uberon_edit.obo > $@.ofn && owltools $@.ofn -o file://`pwd`/$@
+
+RELDIR=trunk
+release:
+ cp uberon_edit.owl $(RELDIR)/core.owl ;\
+ cp uberon_edit.obo $(RELDIR)/core.obo ;\
+ cp uberon.{obo,owl} $(RELDIR) ;\
+ cp merged.{obo,owl} $(RELDIR)/ ;\
+ cp uberon-simple.obo $(RELDIR)/basic.obo ;\
+ cp uberon-simple.owl $(RELDIR)/basic.owl ;\
+ cp mod/*.{obo,owl} $(RELDIR)/bridge/ ;\
+ cp external-disjoints.{obo,owl} $(RELDIR)/bridge/ ;\
+ cp uberon-taxmod-amniote.obo $(RELDIR)/subsets/amniote-basic.obo ;\
+ cp uberon-taxmod-amniote.owl $(RELDIR)/subsets/amniote-basic.owl ;\
+ cp uberon-taxmod-aves.obo $(RELDIR)/subsets/aves-basic.obo ;\
+ cp uberon-taxmod-aves.owl $(RELDIR)/subsets/aves-basic.owl ;\
+ cp uberon-taxmod-euarchontoglires.obo $(RELDIR)/subsets/euarchontoglires-basic.obo ;\
+ cp uberon-taxmod-euarchontoglires.owl $(RELDIR)/subsets/euarchontoglires-basic.owl ;\
+ cp composite-{vertebrate,metazoan}.{obo,owl} $(RELDIR) ;\
+ echo done ;\
+# cd $(RELDIR) && svn commit -m ''
+
+
+
+
+# ----------------------------------------
+# PHENOSCAPE
+# ----------------------------------------
+# NOTE: this is now no longer required
xref-tao-new.obo: uberon_edit.obo
blip-findall -i $< -r ZFA -r TAO -consult util/tao_checker.pro "ix,zut_new(U,T)" -select U-T -no_pred -label -use_tabs | tbl2obolinks.pl -r xref - > $@
@@ -1036,34 +643,3 @@ phenoscape-ext.owl: phenoscape-vocab/phenoscape-anatomy.obo
# ----------------------------------------
aao.obo:
wget http://purl.obolibrary.org/obo/aao.obo
-
-
-# ----------------------------------------
-# RELEASE
-# ----------------------------------------
-mod/bridges: mod/uberon-bridge-to-vhog.owl
- cd mod && ../make-bridge-ontologies-from-xrefs.pl ../uberon_edit.obo
-
-mod/uberon-bridge-to-vhog.owl: uberon_edit.obo
- ./util/mk-vhog-individs.pl organ_association_vHOG.txt uberon_edit.obo > $@.ofn && owltools $@.ofn -o file://`pwd`/$@
-
-RELDIR=trunk
-release:
- cp uberon_edit.owl $(RELDIR)/core.owl ;\
- cp uberon_edit.obo $(RELDIR)/core.obo ;\
- cp uberon.{obo,owl} $(RELDIR) ;\
- cp merged.{obo,owl} $(RELDIR)/ ;\
- cp uberon-simple.obo $(RELDIR)/basic.obo ;\
- cp uberon-simple.owl $(RELDIR)/basic.owl ;\
- cp mod/*.{obo,owl} $(RELDIR)/bridge/ ;\
- cp external-disjoints.{obo,owl} $(RELDIR)/bridge/ ;\
- cp uberon-taxmod-amniote.obo $(RELDIR)/subsets/amniote-basic.obo ;\
- cp uberon-taxmod-amniote.owl $(RELDIR)/subsets/amniote-basic.owl ;\
- cp uberon-taxmod-aves.obo $(RELDIR)/subsets/aves-basic.obo ;\
- cp uberon-taxmod-aves.owl $(RELDIR)/subsets/aves-basic.owl ;\
- cp uberon-taxmod-euarchontoglires.obo $(RELDIR)/subsets/euarchontoglires-basic.obo ;\
- cp uberon-taxmod-euarchontoglires.owl $(RELDIR)/subsets/euarchontoglires-basic.owl ;\
- cp composite-{vertebrate,metazoan}.{obo,owl} $(RELDIR) ;\
- echo done ;\
-# cd $(RELDIR) && svn commit -m ''
-
View
0 uberon_disjoint_from_strict.obo → attic/uberon_disjoint_from_strict.obo
File renamed without changes.
View
0 fma-digit-extension.obo → experimental/fma-digit-extension.obo
File renamed without changes.
View
0 eval_mappings.pro → ext-mappings/eval_mappings.pro
File renamed without changes.
View
0 eval_mappings2.pro → ext-mappings/eval_mappings2.pro
File renamed without changes.
View
0 bp_anat_onts.txt → mappings/bp_anat_onts.txt
File renamed without changes.
View
0 bams.obo → resources/bams.obo
File renamed without changes.
View
0 dhb.obo → resources/dhb.obo
File renamed without changes.
View
696 uberon-map-from-AAO.tbl
@@ -1,696 +0,0 @@
-AAO AAO:0000001 adipose tissue equivalent_to UBERON:0001013 adipose tissue 0 true
-AAO AAO:0000002 alary cartilage part_of part_of UBERON:0006813 nasal skeleton 1 true
-AAO AAO:0000003 alary process of premaxilla part_of part_of UBERON:0002244 premaxilla 1 true
-AAO AAO:0000006 alveolar foramen subclass UBERON:0001710 lower jaw 2 true
-AAO AAO:0000007 anatomical system equivalent_to UBERON:0000467 anatomical system 0 true
-AAO AAO:0000010 angular subclass UBERON:0003278 skeleton of lower jaw 1 true
-AAO AAO:0000012 angulosplenial coronoid process subclass UBERON:0003278 skeleton of lower jaw 1 true
-AAO AAO:0000013 animal tissue subclass UBERON:0000479 portion of tissue 1 false
-AAO AAO:0000015 anterior maxillary process part_of part_of UBERON:0006813 nasal skeleton 1 true
-AAO AAO:0000016 anterior nasal wall part_of part_of UBERON:0006813 nasal skeleton 1 true
-AAO AAO:0000017 anterior process of pars palatina of maxilla part_of part_of UBERON:0002397 maxilla 2 true
-AAO AAO:0000018 anterior ramus of pterygoid part_of part_of UBERON:0003108 suspensorium 2 true
-AAO AAO:0000020 anterolateral process of frontoparietal part_of part_of UBERON:0003129 skull 4 true
-AAO AAO:0000022 antorbital process part_of part_of UBERON:0002397 maxilla 2 true
-AAO AAO:0000024 apertura nasalis externa equivalent_to UBERON:0005928 external naris 0 true
-AAO AAO:0000025 apertura nasalis interna subclass UBERON:0006332 nasal capsule 2 true
-AAO AAO:0000027 areolar connective tissue equivalent_to UBERON:0006815 areolar connective tissue 0 true
-AAO AAO:0000028 articular equivalent_to UBERON:0004744 anguloarticular 0 true
-AAO AAO:0000031 ascending process of palatoquadrate part_of part_of UBERON:0003108 suspensorium 2 true
-AAO AAO:0000032 auditory muscles subclass UBERON:0002376 muscle of head 1 true
-AAO AAO:0000033 autonomic nervous system equivalent_to UBERON:0002410 autonomic nervous system 0 true
-AAO AAO:0000034 axial skeleton equivalent_to UBERON:0002090 postcranial axial skeleton 0 true
-AAO AAO:0000036 basal process of palatoquadrate part_of part_of UBERON:0003108 suspensorium 2 true
-AAO AAO:0000037 basicranial fontanelle part_of part_of UBERON:0003129 skull 3 true
-AAO AAO:0000038 basimandibulare part_of part_of UBERON:0003278 skeleton of lower jaw 1 true
-AAO AAO:0000039 basioccipital equivalent_to UBERON:0001692 basioccipital bone 0 true
-AAO AAO:0000040 basisphenoid equivalent_to UBERON:0006428 basisphenoid bone 0 true
-AAO AAO:0000041 bidders organ part_of part_of UBERON:0004122 genitourinary system 1 true
-AAO AAO:0000042 blastoderm equivalent_to UBERON:0004750 blastoderm 0 true
-AAO AAO:0000043 blastodisc equivalent_to UBERON:0004749 blastodisc 0 true
-AAO AAO:0000044 blastomere subclass UBERON:0002050 embryonic structure 1 true
-AAO AAO:0000045 blastopore equivalent_to UBERON:0000100 blastopore 0 true
-AAO AAO:0000046 blood equivalent_to UBERON:0000178 blood 0 true
-AAO AAO:0000047 bone equivalent_to UBERON:0001474 bone 0 true
-AAO AAO:0000049 bottle cells subclass UBERON:0002050 embryonic structure 1 true
-AAO AAO:0000050 braincase and auditory apparatus part_of part_of UBERON:0003129 skull 1 true
-AAO AAO:0000051 braincase and otic capsule opening part_of part_of UBERON:0003129 skull 2 true
-AAO AAO:0000052 braincase and otic capsule skeleton part_of part_of UBERON:0003129 skull 2 true
-AAO AAO:0000053 buccal cavity equivalent_to UBERON:0000167 oral cavity 0 true
-AAO AAO:0000054 buccopharyngeal cavity part_of part_of UBERON:0001004 respiratory system 1 true
-AAO AAO:0000057 canalis semircularis anterior part_of part_of UBERON:0001846 internal ear 2 true
-AAO AAO:0000058 canalis semircularis posterior part_of part_of UBERON:0001846 internal ear 2 true
-AAO AAO:0000059 capsular process part_of part_of UBERON:0006813 nasal skeleton 2 true
-AAO AAO:0000060 cartilage equivalent_to UBERON:0002418 cartilage 0 true
-AAO AAO:0000061 cartilage bridge part_of part_of UBERON:0006813 nasal skeleton 1 true
-AAO AAO:0000068 cartilago ectochoanalis part_of part_of UBERON:0006813 nasal skeleton 1 true
-AAO AAO:0000069 cartilago infranarina part_of part_of UBERON:0006813 nasal skeleton 1 true
-AAO AAO:0000074 cartilago orbitalis part_of part_of UBERON:0003129 skull 3 true
-AAO AAO:0000078 cartilago prootico-occipitalis part_of part_of UBERON:0003129 skull 3 true
-AAO AAO:0000079 cartilago retronarina part_of part_of UBERON:0006813 nasal skeleton 1 true
-AAO AAO:0000080 caudal-sacral region part_of part_of UBERON:0001130 vertebral column 1 true
-AAO AAO:0000081 caudal muscles part_of part_of UBERON:0000383 musculature of body 1 true
-AAO AAO:0000082 caudal region equivalent_to UBERON:0006071 caudal region 0 true
-AAO AAO:0000085 cavum inferius subclass UBERON:0001707 nasal cavity 1 true
-AAO AAO:0000086 cavum internasale subclass UBERON:0001707 nasal cavity 1 true
-AAO AAO:0000087 cavum medius subclass UBERON:0001707 nasal cavity 1 true
-AAO AAO:0000088 cavum praenasale subclass UBERON:0001707 nasal cavity 1 true
-AAO AAO:0000089 cavum principale subclass UBERON:0001707 nasal cavity 1 true
-AAO AAO:0000090 central nervous system equivalent_to UBERON:0001017 central nervous system 0 true
-AAO AAO:0000091 cervical muscles part_of part_of UBERON:0000383 musculature of body 1 true
-AAO AAO:0000092 cervical region equivalent_to UBERON:0005434 cervical region 0 true
-AAO AAO:0000093 choana equivalent_to UBERON:0004771 posterior nasal aperture 0 true
-AAO AAO:0000094 chondrocranium equivalent_to UBERON:0004761 cartilaginous neurocranium 0 true
-AAO AAO:0000095 cloaca equivalent_to UBERON:0000162 cloaca 0 true
-AAO AAO:0000098 connective tissue equivalent_to UBERON:0002384 connective tissue 0 true
-AAO AAO:0000099 connective tissue proper subclass UBERON:0002384 connective tissue 1 true
-AAO AAO:0000103 coronoid part_of part_of UBERON:0003278 skeleton of lower jaw 1 true
-AAO AAO:0000104 coronoid teeth part_of part_of UBERON:0003672 dentition 1 true
-AAO AAO:0000107 cranial muscles equivalent_to UBERON:0002376 muscle of head 0 true
-AAO AAO:0000108 cranial nerves equivalent_to UBERON:0001785 cranial nerve 0 true
-AAO AAO:0000109 cranial skeleton equivalent_to UBERON:0003129 skull 0 true
-AAO AAO:0000110 crista contacta part_of part_of UBERON:0006813 nasal skeleton 3 true
-AAO AAO:0000111 crista dentalis of maxilla part_of part_of UBERON:0002397 maxilla 2 true
-AAO AAO:0000112 crista dentalis of premaxilla part_of part_of UBERON:0002244 premaxilla 2 true
-AAO AAO:0000113 crista intermedia part_of part_of UBERON:0006813 nasal skeleton 1 true
-AAO AAO:0000115 crista lateralis of premaxilla part_of part_of UBERON:0002244 premaxilla 1 true
-AAO AAO:0000116 crista parotica equivalent_to UBERON:0006837 tegmen tympani 0 true
-AAO AAO:0000117 crista subnasalis part_of part_of UBERON:0006813 nasal skeleton 1 true
-AAO AAO:0000118 crista supraorbitalis part_of part_of UBERON:0006813 nasal skeleton 1 true
-AAO AAO:0000119 cutaneous muscles equivalent_to UBERON:0006821 cutaneous muscle 0 true
-AAO AAO:0000121 dense connective tissue subclass UBERON:0002384 connective tissue 2 true
-AAO AAO:0000124 dentary equivalent_to UBERON:0004742 dentary 0 true
-AAO AAO:0000125 dentary teeth part_of part_of UBERON:0003672 dentition 1 true
-AAO AAO:0000126 dentition equivalent_to UBERON:0003672 dentition 0 true
-AAO AAO:0000128 dermis equivalent_to UBERON:0002067 dermis 0 true
-AAO AAO:0000129 digestive system equivalent_to UBERON:0001007 digestive system 0 true
-AAO AAO:0000130 digestive system glands equivalent_to UBERON:0006925 digestive gland 0 true
-AAO AAO:0000131 dilatatio alaris part_of part_of UBERON:0003108 suspensorium 3 true
-AAO AAO:0000132 dorsal plate part_of part_of UBERON:0006813 nasal skeleton 1 true
-AAO AAO:0000135 ductus endolymphaticus part_of part_of UBERON:0001846 internal ear 2 true
-AAO AAO:0000136 ductus perilymphaticus part_of part_of UBERON:0001846 internal ear 2 true
-AAO AAO:0000137 ectoderm equivalent_to UBERON:0000924 ectoderm 0 true
-AAO AAO:0000138 embryonic structure equivalent_to UBERON:0002050 embryonic structure 0 true
-AAO AAO:0000139 endoderm equivalent_to UBERON:0000925 endoderm 0 true
-AAO AAO:0000141 endolymphatic system part_of part_of UBERON:0001846 internal ear 1 true
-AAO AAO:0000142 epaxial muscles equivalent_to UBERON:0003900 epaxial muscle 0 true
-AAO AAO:0000143 epidermis equivalent_to UBERON:0001003 epidermis 0 true
-AAO AAO:0000144 epithelium equivalent_to UBERON:0000483 epithelium 0 true
-AAO AAO:0000145 esophagus equivalent_to UBERON:0001043 esophagus 0 true
-AAO AAO:0000146 eustachian canal equivalent_to UBERON:0002393 pharyngotympanic tube 0 true
-AAO AAO:0000147 exoccipital equivalent_to UBERON:0001693 exoccipital bone 0 true
-AAO AAO:0000155 extremitas anterior part_of part_of UBERON:0006813 nasal skeleton 2 true
-AAO AAO:0000156 eye muscles equivalent_to UBERON:0004277 eye muscle 0 true
-AAO AAO:0000157 fat bodies equivalent_to UBERON:0003916 fat pad 0 true
-AAO AAO:0000160 fenestra dorsalis nasi subclass UBERON:0006332 nasal capsule 2 true
-AAO AAO:0000161 fenestra endochoanalis subclass UBERON:0006332 nasal capsule 2 true
-AAO AAO:0000162 fenestra endonarina communis subclass UBERON:0006332 nasal capsule 2 true
-AAO AAO:0000164 fenestra lateralis nasi subclass UBERON:0006332 nasal capsule 2 true
-AAO AAO:0000166 fenestra nasobasalis subclass UBERON:0006332 nasal capsule 2 true
-AAO AAO:0000167 fenestra nasolateralis subclass UBERON:0006332 nasal capsule 2 true
-AAO AAO:0000169 fenestra ovalis equivalent_to UBERON:0001698 foramen ovale of skull 0 true
-AAO AAO:0000170 fenestra precerebralis subclass UBERON:0006332 nasal capsule 2 true
-AAO AAO:0000171 fenestra prechoanalis subclass UBERON:0006332 nasal capsule 2 true
-AAO AAO:0000177 flange of quadratojugal part_of part_of UBERON:0003277 skeleton of upper jaw 2 true
-AAO AAO:0000178 footplate of pars media plectri part_of part_of UBERON:0003129 skull 5 true
-AAO AAO:0000179 foramen acusticum part_of part_of UBERON:0003129 skull 3 true
-AAO AAO:0000180 foramen acusticum anterius part_of part_of UBERON:0003129 skull 4 true
-AAO AAO:0000181 foramen acusticum maius part_of part_of UBERON:0003129 skull 5 true
-AAO AAO:0000182 foramen acusticum minus part_of part_of UBERON:0003129 skull 5 true
-AAO AAO:0000183 foramen acusticum posterius part_of part_of UBERON:0003129 skull 4 true
-AAO AAO:0000185 foramen endolymphaticum part_of part_of UBERON:0003129 skull 3 true
-AAO AAO:0000189 foramen orbitonasale laterale subclass UBERON:0006332 nasal capsule 2 true
-AAO AAO:0000190 foramen orbitonasale mediale subclass UBERON:0006332 nasal capsule 2 true
-AAO AAO:0000192 foramen perilymphaticum part_of part_of UBERON:0003129 skull 3 true
-AAO AAO:0000193 foramen perilymphaticum accessorium part_of part_of UBERON:0003129 skull 4 true
-AAO AAO:0000194 foramen perilymphaticum superius equivalent_to UBERON:0005446 foramen rotundum 0 true
-AAO AAO:0000195 foramen perilymphaticus inferius part_of part_of UBERON:0003129 skull 4 true
-AAO AAO:0000199 fore propodium subclass UBERON:0001440 forelimb skeleton 1 true
-AAO AAO:0000200 fore epipodium subclass UBERON:0001440 forelimb skeleton 1 true
-AAO AAO:0000201 fore mesopodium subclass UBERON:0001440 forelimb skeleton 1 true
-AAO AAO:0000202 forelimb skeleton equivalent_to UBERON:0001440 forelimb skeleton 0 true
-AAO AAO:0000203 forelimb muscles proper subclass UBERON:0003662 forelimb muscle 1 true
-AAO AAO:0000204 forelimb muscles equivalent_to UBERON:0003662 forelimb muscle 0 true
-AAO AAO:0000205 forelimb equivalent_to UBERON:0002102 forelimb 0 true
-AAO AAO:0000206 frontal equivalent_to UBERON:0000209 tetrapod frontal bone 0 true
-AAO AAO:0000207 frontoparietal part_of part_of UBERON:0003129 skull 3 true
-AAO AAO:0000208 frontoparietal constriction part_of part_of UBERON:0003129 skull 4 true
-AAO AAO:0000209 frontoparietal fontanelle part_of part_of UBERON:0003129 skull 3 true
-AAO AAO:0000211 germ ring equivalent_to UBERON:0002541 germ ring 0 true
-AAO AAO:0000212 glands equivalent_to UBERON:0002530 gland 0 true
-AAO AAO:0000213 gonad equivalent_to UBERON:0000991 gonad 0 true
-AAO AAO:0000216 hind epipodium subclass UBERON:0001441 hindlimb skeleton 1 true
-AAO AAO:0000217 hind limb skeleton equivalent_to UBERON:0001441 hindlimb skeleton 0 true
-AAO AAO:0000218 hind limb muscles proper subclass UBERON:0003663 hindlimb muscle 1 true
-AAO AAO:0000219 hind limb equivalent_to UBERON:0002103 hindlimb 0 true
-AAO AAO:0000220 hind mesopodium equivalent_to UBERON:0001447 tarsal bone 0 true
-AAO AAO:0000221 hind metapodium equivalent_to UBERON:0000983 metatarsus 0 true
-AAO AAO:0000222 hindlimb muscles equivalent_to UBERON:0003663 hindlimb muscle 0 true
-AAO AAO:0000224 hyobranchial muscles subclass UBERON:0002376 muscle of head 1 true
-AAO AAO:0000225 hyoid apparatus part_of part_of UBERON:0001434 skeletal system 2 true
-AAO AAO:0000226 hyolaryngeal complex part_of part_of UBERON:0001434 skeletal system 1 true
-AAO AAO:0000228 hypaxial muscles equivalent_to UBERON:0003895 hypaxial myotome region 0 true
-AAO AAO:0000229 hypoblast equivalent_to UBERON:0000089 hypoblast 0 true
-AAO AAO:0000234 inferior prenasal cartilage part_of part_of UBERON:0006813 nasal skeleton 1 true
-AAO AAO:0000237 infrarrostral cartilage part_of part_of UBERON:0004761 cartilaginous neurocranium 1 true
-AAO AAO:0000238 inner ear equivalent_to UBERON:0001846 internal ear 0 true
-AAO AAO:0000239 integument equivalent_to UBERON:0002199 integument 0 true
-AAO AAO:0000246 intestines equivalent_to UBERON:0000160 intestine 0 true
-AAO AAO:0000247 jaw muscles subclass UBERON:0002376 muscle of head 1 true
-AAO AAO:0000249 jugular foramen equivalent_to UBERON:0005456 jugular foramen 0 true
-AAO AAO:0000250 kidney equivalent_to UBERON:0002113 kidney 0 true
-AAO AAO:0000253 lagena equivalent_to UBERON:0001844 cochlea 0 true
-AAO AAO:0000254 lamella alaris part_of part_of UBERON:0001695 squamous part of temporal bone 1 true
-AAO AAO:0000255 lamina anterior of pars facialis part_of part_of UBERON:0002397 maxilla 2 true
-AAO AAO:0000259 lamina inferior part_of part_of UBERON:0006813 nasal skeleton 1 true
-AAO AAO:0000260 lamina nariochoanalis part_of part_of UBERON:0006813 nasal skeleton 1 true
-AAO AAO:0000262 lamina orbitonasalis equivalent_to UBERON:0006604 lamina orbitonasalis 0 true
-AAO AAO:0000263 lamina precerebralis part_of part_of UBERON:0006813 nasal skeleton 1 true
-AAO AAO:0000264 lamina superior part_of part_of UBERON:0006813 nasal skeleton 1 true
-AAO AAO:0000267 laryngeal apparatus part_of part_of UBERON:0001434 skeletal system 2 true
-AAO AAO:0000268 larynx equivalent_to UBERON:0001737 larynx 0 true
-AAO AAO:0000269 lateral line system equivalent_to UBERON:0002540 lateral line system 0 true
-AAO AAO:0000272 lower jaw equivalent_to UBERON:0001710 lower jaw 0 true
-AAO AAO:0000273 lower jaw opening subclass UBERON:0001710 lower jaw 1 true
-AAO AAO:0000274 lower jaw skeleton equivalent_to UBERON:0003278 skeleton of lower jaw 0 true
-AAO AAO:0000275 lungs equivalent_to UBERON:0002048 lung 0 true
-AAO AAO:0000277 mandibular symphysis equivalent_to UBERON:0006606 mandibular symphysis 0 true
-AAO AAO:0000280 margo mandibularis of pterygoid part_of part_of UBERON:0003108 suspensorium 2 true
-AAO AAO:0000281 margo orbitalis of maxilla part_of part_of UBERON:0002397 maxilla 1 true
-AAO AAO:0000282 margo orbitalis of pterygoid part_of part_of UBERON:0003108 suspensorium 2 true
-AAO AAO:0000283 margo orbitalis of squamosal part_of part_of UBERON:0001695 squamous part of temporal bone 2 true
-AAO AAO:0000284 margo tympanicus of pterygoid part_of part_of UBERON:0003108 suspensorium 2 true
-AAO AAO:0000285 maxilla equivalent_to UBERON:0002397 maxilla 0 true
-AAO AAO:0000287 maxillary teeth part_of part_of UBERON:0003672 dentition 1 true
-AAO AAO:0000288 maxillopalatine part_of part_of UBERON:0003277 skeleton of upper jaw 1 true
-AAO AAO:0000289 Meckel's cartilage equivalent_to UBERON:0003107 Meckel's cartilage 0 true
-AAO AAO:0000290 medial inferior prenasal cartilage part_of part_of UBERON:0006813 nasal skeleton 1 true
-AAO AAO:0000291 medial orbitonasal foramen subclass UBERON:0006332 nasal capsule 2 true
-AAO AAO:0000292 medial ramus of pterygoid part_of part_of UBERON:0003108 suspensorium 2 true
-AAO AAO:0000294 median prenasal process part_of part_of UBERON:0006813 nasal skeleton 2 true
-AAO AAO:0000295 median symphysis part_of part_of UBERON:0001709 upper jaw 1 true
-AAO AAO:0000298 mental foramen equivalent_to UBERON:0006812 mental foramen 0 true
-AAO AAO:0000301 mentomeckelian part_of part_of UBERON:0003278 skeleton of lower jaw 1 true
-AAO AAO:0000303 mesethmoid part_of part_of UBERON:0003129 skull 3 true
-AAO AAO:0000304 mesoderm equivalent_to UBERON:0000926 mesoderm 0 true
-AAO AAO:0000306 muscle tissue equivalent_to UBERON:0002385 muscle tissue 0 true
-AAO AAO:0000307 muscular system equivalent_to UBERON:0000383 musculature of body 0 true
-AAO AAO:0000309 narial muscles subclass UBERON:0002376 muscle of head 1 true
-AAO AAO:0000311 naris equivalent_to UBERON:0000003 naris 0 true
-AAO AAO:0000312 nasal equivalent_to UBERON:0001681 nasal bone 0 true
-AAO AAO:0000313 nasal capsule equivalent_to UBERON:0006332 nasal capsule 0 true
-AAO AAO:0000314 nasal cavity equivalent_to UBERON:0001707 nasal cavity 0 true
-AAO AAO:0000316 nasal opening subclass UBERON:0006332 nasal capsule 1 true
-AAO AAO:0000320 nasal skeleton equivalent_to UBERON:0006813 nasal skeleton 0 true
-AAO AAO:0000323 nasopremaxilla part_of part_of UBERON:0003277 skeleton of upper jaw 1 true
-AAO AAO:0000324 nervous system equivalent_to UBERON:0001016 nervous system 0 true
-AAO AAO:0000325 nervous tissue equivalent_to UBERON:0003714 neural tissue 0 true
-AAO AAO:0000327 notochord equivalent_to UBERON:0002328 notochord 0 true
-AAO AAO:0000329 oblique cartilage part_of part_of UBERON:0006813 nasal skeleton 1 true
-AAO AAO:0000330 occipital condyle equivalent_to UBERON:0006811 occipital condyle 0 true
-AAO AAO:0000332 oculomotor foramen part_of part_of UBERON:0003129 skull 3 true
-AAO AAO:0000333 olfactory foramen subclass UBERON:0006332 nasal capsule 2 true
-AAO AAO:0000334 olfactory system equivalent_to UBERON:0005725 olfactory system 0 true
-AAO AAO:0000341 optic fenestra part_of part_of UBERON:0003129 skull 3 true
-AAO AAO:0000342 optic foramen equivalent_to UBERON:0005745 optic canal 0 true
-AAO AAO:0000343 orbit equivalent_to UBERON:0001697 orbit 0 true
-AAO AAO:0000344 orbitonasal foramen part_of part_of UBERON:0003129 skull 3 true
-AAO AAO:0000345 orbitosphenoid equivalent_to UBERON:0002478 orbitosphenoid 0 true
-AAO AAO:0000346 organizer equivalent_to UBERON:0003062 primitive knot 0 true
-AAO AAO:0000347 os articulare part_of part_of UBERON:0003107 Meckel's cartilage 1 true
-AAO AAO:0000348 os basale part_of part_of UBERON:0003129 skull 3 true
-AAO AAO:0000362 other muscles part_of part_of UBERON:0000383 musculature of body 1 true
-AAO AAO:0000363 otic ligament part_of part_of UBERON:0003108 suspensorium 2 true
-AAO AAO:0000364 otic plate of pterygoid part_of part_of UBERON:0003108 suspensorium 2 true
-AAO AAO:0000365 otic process of palatoquadrate part_of part_of UBERON:0003108 suspensorium 2 true
-AAO AAO:0000367 otic ramus of squamosal part_of part_of UBERON:0001695 squamous part of temporal bone 2 true
-AAO AAO:0000368 otoccipital part_of part_of UBERON:0003129 skull 3 true
-AAO AAO:0000371 ovary equivalent_to UBERON:0000992 ovary 0 true
-AAO AAO:0000372 palatine equivalent_to UBERON:0004748 autopalatine 0 true
-AAO AAO:0000374 palatine process of pars palatina of premaxilla part_of part_of UBERON:0002244 premaxilla 2 true
-AAO AAO:0000375 palatine process of the pars facialis of the maxilla part_of part_of UBERON:0002397 maxilla 2 true
-AAO AAO:0000376 palatine teeth part_of part_of UBERON:0003672 dentition 1 true
-AAO AAO:0000379 palatoquadrate part_of part_of UBERON:0003108 suspensorium 1 true
-AAO AAO:0000380 palatoquadrate articular process part_of part_of UBERON:0003108 suspensorium 2 true
-AAO AAO:0000381 paranasal commissure part_of part_of UBERON:0006813 nasal skeleton 1 true
-AAO AAO:0000384 parasagittal crest part_of part_of UBERON:0003129 skull 4 true
-AAO AAO:0000385 parasphenoid equivalent_to UBERON:0004745 parasphenoid 0 true
-AAO AAO:0000386 cultriform process part_of part_of UBERON:0004745 parasphenoid 1 true
-AAO AAO:0000387 subotic ala part_of part_of UBERON:0004745 parasphenoid 1 true
-AAO AAO:0000388 parasphenoid teeth part_of part_of UBERON:0003672 dentition 1 true
-AAO AAO:0000389 paries nasi part_of part_of UBERON:0006813 nasal skeleton 1 true
-AAO AAO:0000390 parietal equivalent_to UBERON:0000210 tetrapod parietal bone 0 true
-AAO AAO:0000393 pars amphibiorum part_of part_of UBERON:0001854 saccule of membranous labyrinth 1 true
-AAO AAO:0000394 pars articularis of mandibular arch part_of part_of UBERON:0003107 Meckel's cartilage 1 true
-AAO AAO:0000395 pars basilaris part_of part_of UBERON:0001854 saccule of membranous labyrinth 1 true
-AAO AAO:0000396 pars dentalis of maxilla part_of part_of UBERON:0002397 maxilla 1 true
-AAO AAO:0000397 pars dentalis of premaxilla part_of part_of UBERON:0002244 premaxilla 1 true
-AAO AAO:0000399 pars externa plectri part_of part_of UBERON:0003129 skull 4 true
-AAO AAO:0000400 pars facialis of maxilla part_of part_of UBERON:0002397 maxilla 1 true
-AAO AAO:0000401 pars facialis of maxillopalatine part_of part_of UBERON:0003277 skeleton of upper jaw 2 true
-AAO AAO:0000405 pars inferior of labyrinth part_of part_of UBERON:0001846 internal ear 1 true
-AAO AAO:0000406 pars interna plectri part_of part_of UBERON:0003129 skull 4 true
-AAO AAO:0000408 pars media plectri part_of part_of UBERON:0003129 skull 4 true
-AAO AAO:0000413 pars palatina of maxilla part_of part_of UBERON:0002397 maxilla 1 true
-AAO AAO:0000414 pars palatina of premaxilla part_of part_of UBERON:0002244 premaxilla 1 true
-AAO AAO:0000420 pars superior of labyrinth part_of part_of UBERON:0001846 internal ear 1 true
-AAO AAO:0000422 pectoral girdle equivalent_to UBERON:0006850 tetratpod pectoral girdle 0 true
-AAO AAO:0000423 pectoral girdle muscles part_of part_of UBERON:0003662 forelimb muscle 1 true
-AAO AAO:0000426 pelvic girdle equivalent_to UBERON:0001271 pelvic girdle 0 true
-AAO AAO:0000427 pelvic girdle muscles equivalent_to UBERON:0001497 muscle of pelvic girdle 0 true
-AAO AAO:0000428 perilymphatic system part_of part_of UBERON:0001846 internal ear 1 true
-AAO AAO:0000429 peripheral nervous system equivalent_to UBERON:0000010 peripheral nervous system 0 true
-AAO AAO:0000430 pigment cells subclass UBERON:0002199 integument 1 true
-AAO AAO:0000431 pila antotica part_of part_of UBERON:0003129 skull 3 true
-AAO AAO:0000432 pila metoptica part_of part_of UBERON:0003129 skull 3 true
-AAO AAO:0000433 pineal foramen part_of part_of UBERON:0003129 skull 4 true
-AAO AAO:0000434 planum antorbitale part_of part_of UBERON:0006813 nasal skeleton 1 true
-AAO AAO:0000437 planum conchale part_of part_of UBERON:0006813 nasal skeleton 1 true
-AAO AAO:0000438 planum internasale part_of part_of UBERON:0006813 nasal skeleton 1 true
-AAO AAO:0000440 planum terminale part_of part_of UBERON:0006813 nasal skeleton 1 true
-AAO AAO:0000441 planum triangulare part_of part_of UBERON:0006813 nasal skeleton 1 true
-AAO AAO:0000443 plectral apparatus part_of part_of UBERON:0003129 skull 3 true
-AAO AAO:0000446 posterior condyle part_of part_of UBERON:0003278 skeleton of lower jaw 2 true
-AAO AAO:0000448 posterior maxillary process part_of part_of UBERON:0006813 nasal skeleton 1 true
-AAO AAO:0000449 posterior maxillary process dorsal process part_of part_of UBERON:0006813 nasal skeleton 2 true
-AAO AAO:0000450 posterior mental process part_of part_of UBERON:0003278 skeleton of lower jaw 1 true
-AAO AAO:0000451 posterior ramus of pterygoid part_of part_of UBERON:0003108 suspensorium 2 true
-AAO AAO:0000453 posterolateral vomerine process part_of part_of UBERON:0002396 vomer 1 true
-AAO AAO:0000454 postnasal wall part_of part_of UBERON:0006813 nasal skeleton 1 true
-AAO AAO:0000458 prearticular part_of part_of UBERON:0003278 skeleton of lower jaw 1 true
-AAO AAO:0000459 prearticular coronoid process part_of part_of UBERON:0003278 skeleton of lower jaw 2 true
-AAO AAO:0000460 prefrontal part_of part_of UBERON:0003129 skull 3 true
-AAO AAO:0000461 premaxilla equivalent_to UBERON:0002244 premaxilla 0 true
-AAO AAO:0000464 premaxillary teeth part_of part_of UBERON:0003672 dentition 1 true
-AAO AAO:0000467 preorbital process of the pars facialis of the maxilla part_of part_of UBERON:0002397 maxilla 2 true
-AAO AAO:0000468 presumptive blood equivalent_to UBERON:0006596 presumptive blood 0 true
-AAO AAO:0000469 presumptive central nervous system equivalent_to UBERON:0002346 neural ectoderm 0 true
-AAO AAO:0000470 presumptive ectoderm equivalent_to UBERON:0006601 presumptive ectoderm 0 true
-AAO AAO:0000471 presumptive endoderm equivalent_to UBERON:0006595 presumptive endoderm 0 true
-AAO AAO:0000472 presumptive enteric nervous system equivalent_to UBERON:0006600 presumptive enteric nervous system 0 true
-AAO AAO:0000473 presumptive epidermis subclass UBERON:0006598 presumptive structure 2 true
-AAO AAO:0000474 presumptive hypochord equivalent_to UBERON:0006599 presumptive hypochord 0 true
-AAO AAO:0000475 presumptive integument subclass UBERON:0006598 presumptive structure 1 true
-AAO AAO:0000476 presumptive mesoderm equivalent_to UBERON:0006603 presumptive mesoderm 0 true
-AAO AAO:0000477 presumptive nervous system subclass UBERON:0006598 presumptive structure 1 true
-AAO AAO:0000478 presumptive notochord equivalent_to UBERON:0004880 chordamesoderm 0 true
-AAO AAO:0000479 presumptive structure equivalent_to UBERON:0006598 presumptive structure 0 true
-AAO AAO:0000480 primary germ layer equivalent_to UBERON:0000923 germ layer 0 true
-AAO AAO:0000486 processus ascendens plectri part_of part_of UBERON:0003129 skull 5 true
-AAO AAO:0000492 processus infrafenestralis part_of part_of UBERON:0006813 nasal skeleton 3 true
-AAO AAO:0000493 processus internus part_of part_of UBERON:0003278 skeleton of lower jaw 2 true
-AAO AAO:0000494 processus lingualis of pterygoid part_of part_of UBERON:0003108 suspensorium 3 true
-AAO AAO:0000500 processus posterior of maxilla part_of part_of UBERON:0002397 maxilla 1 true
-AAO AAO:0000505 processus pterygoideus of maxilla part_of part_of UBERON:0002397 maxilla 2 true
-AAO AAO:0000509 processus suprafenestralis part_of part_of UBERON:0006813 nasal skeleton 3 true
-AAO AAO:0000512 processus zygomatico-maxillaris part_of part_of UBERON:0002397 maxilla 1 true
-AAO AAO:0000514 prootic equivalent_to UBERON:0004746 prootic 0 true
-AAO AAO:0000515 pseudoangular part_of part_of UBERON:0003278 skeleton of lower jaw 1 true
-AAO AAO:0000516 pseudobasal process part_of part_of UBERON:0003108 suspensorium 2 true
-AAO AAO:0000518 pseudodentary part_of part_of UBERON:0003278 skeleton of lower jaw 1 true
-AAO AAO:0000519 pseudodentary teeth part_of part_of UBERON:0003672 dentition 1 true
-AAO AAO:0000521 pterygoid part_of part_of UBERON:0003108 suspensorium 1 true
-AAO AAO:0000523 pterygoid process of palatoquadrate part_of part_of UBERON:0003108 suspensorium 2 true
-AAO AAO:0000524 pterygoquadrate equivalent_to UBERON:0004752 palatoquadrate cartilage 0 true
-AAO AAO:0000525 quadrate bone equivalent_to UBERON:0006597 quadrate 0 true
-AAO AAO:0000527 quadrate process of palatoquadrate part_of part_of UBERON:0003108 suspensorium 2 true
-AAO AAO:0000532 quadratojugal part_of part_of UBERON:0003277 skeleton of upper jaw 1 true
-AAO AAO:0000538 recessus fenestrae ovalis part_of part_of UBERON:0001846 internal ear 2 true
-AAO AAO:0000539 recessus marsupiatus of premaxilla part_of part_of UBERON:0002244 premaxilla 1 true
-AAO AAO:0000540 recessus vaginiformis part_of part_of UBERON:0002397 maxilla 1 true
-AAO AAO:0000541 respiratory system equivalent_to UBERON:0001004 respiratory system 0 true
-AAO AAO:0000542 reticular connective tissue equivalent_to UBERON:0006804 reticular tissue 0 true
-AAO AAO:0000543 retroarticular process part_of part_of UBERON:0003278 skeleton of lower jaw 2 true
-AAO AAO:0000545 rib equivalent_to UBERON:0002228 rib 0 true
-AAO AAO:0000547 rostral process part_of part_of UBERON:0001681 nasal bone 1 true
-AAO AAO:0000550 sacculus equivalent_to UBERON:0001854 saccule of membranous labyrinth 0 true
-AAO AAO:0000551 saccus endolymphaticus part_of part_of UBERON:0001846 internal ear 2 true
-AAO AAO:0000552 sacrum equivalent_to UBERON:0003690 sacrum 0 true
-AAO AAO:0000555 sensory system equivalent_to UBERON:0001032 sensory system 0 true
-AAO AAO:0000556 septomaxilla part_of part_of UBERON:0006813 nasal skeleton 1 true
-AAO AAO:0000559 septum nasi part_of part_of UBERON:0006813 nasal skeleton 1 true
-AAO AAO:0000560 septum semicircularium anterior part_of part_of UBERON:0001846 internal ear 1 true
-AAO AAO:0000561 septum semicircularium laterale part_of part_of UBERON:0001846 internal ear 1 true
-AAO AAO:0000562 septum semircularium posterior part_of part_of UBERON:0001846 internal ear 1 true
-AAO AAO:0000563 seydels palatal process part_of part_of UBERON:0006813 nasal skeleton 2 true
-AAO AAO:0000565 skeletal support for eminentia olfactoria part_of part_of UBERON:0006813 nasal skeleton 1 true
-AAO AAO:0000566 skeletal system equivalent_to UBERON:0001434 skeletal system 0 true
-AAO AAO:0000569 solum nasi part_of part_of UBERON:0006813 nasal skeleton 1 true
-AAO AAO:0000570 spatium sacculare part_of part_of UBERON:0001846 internal ear 2 true
-AAO AAO:0000571 specialized connective tissue subclass UBERON:0002384 connective tissue 1 true
-AAO AAO:0000572 sphenethmoid part_of part_of UBERON:0003129 skull 3 true
-AAO AAO:0000573 splenial part_of part_of UBERON:0003278 skeleton of lower jaw 1 true
-AAO AAO:0000574 squamosal equivalent_to UBERON:0001695 squamous part of temporal bone 0 true
-AAO AAO:0000579 stomach equivalent_to UBERON:0000945 stomach 0 true
-AAO AAO:0000580 stylus of pars media plectri equivalent_to UBERON:0001687 stapes 0 true
-AAO AAO:0000581 sulcus dentalis of maxilla part_of part_of UBERON:0002397 maxilla 1 true
-AAO AAO:0000582 sulcus dentalis of premaxilla part_of part_of UBERON:0002244 premaxilla 1 true
-AAO AAO:0000583 sulcus for Meckels cartilage part_of part_of UBERON:0003278 skeleton of lower jaw 2 true
-AAO AAO:0000586 superior prenasal cartilage part_of part_of UBERON:0006813 nasal skeleton 1 true
-AAO AAO:0000587 supraangular part_of part_of UBERON:0003278 skeleton of lower jaw 1 true
-AAO AAO:0000588 supraoccipital equivalent_to UBERON:0004747 supraoccipital 0 true
-AAO AAO:0000590 supraorbital flange part_of part_of UBERON:0003129 skull 4 true
-AAO AAO:0000591 suprasphenoid part_of part_of UBERON:0003129 skull 3 true
-AAO AAO:0000596 suspensorium equivalent_to UBERON:0003108 suspensorium 0 true
-AAO AAO:0000597 symphysis maxillaris part_of part_of UBERON:0001709 upper jaw 1 true
-AAO AAO:0000599 taenia tecti marginalis part_of part_of UBERON:0003129 skull 3 true
-AAO AAO:0000601 tectum nasi part_of part_of UBERON:0006813 nasal skeleton 1 true
-AAO AAO:0000602 tectum synoticum equivalent_to UBERON:0006605 tectum synoticum 0 true
-AAO AAO:0000605 tentacular foramen subclass UBERON:0001709 upper jaw 2 true
-AAO AAO:0000606 testis equivalent_to UBERON:0000473 testis 0 true
-AAO AAO:0000607 tissue equivalent_to UBERON:0000479 portion of tissue 0 true
-AAO AAO:0000610 trochlear foramen part_of part_of UBERON:0003129 skull 3 true
-AAO AAO:0000611 trunk muscles equivalent_to UBERON:0001774 muscle of trunk 0 true
-AAO AAO:0000612 trunk region part_of part_of UBERON:0001130 vertebral column 1 true
-AAO AAO:0000615 tympanic annulus equivalent_to UBERON:0002218 tympanic ring 0 true
-AAO AAO:0000619 tympanosquamosal part_of part_of UBERON:0003108 suspensorium 1 true
-AAO AAO:0000620 upper jaw equivalent_to UBERON:0001709 upper jaw 0 true
-AAO AAO:0000621 upper jaw opening subclass UBERON:0001709 upper jaw 1 true
-AAO AAO:0000622 upper jaw skeleton equivalent_to UBERON:0003277 skeleton of upper jaw 0 true
-AAO AAO:0000623 urinary bladder equivalent_to UBERON:0001255 urinary bladder 0 true
-AAO AAO:0000624 urogenital system equivalent_to UBERON:0004122 genitourinary system 0 true
-AAO AAO:0000625 utriculus equivalent_to UBERON:0001853 utricle of membranous labyrinth 0 true
-AAO AAO:0000628 ventral ramus of squamosal part_of part_of UBERON:0001695 squamous part of temporal bone 1 true
-AAO AAO:0000629 ventrolateral process of palatoquadrate part_of part_of UBERON:0004761 cartilaginous neurocranium 1 true
-AAO AAO:0000631 vestibuloauditory system equivalent_to UBERON:0002105 vestibulo-auditory system 0 true
-AAO AAO:0000632 visual system equivalent_to UBERON:0002104 visual system 0 true
-AAO AAO:0000633 vomer equivalent_to UBERON:0002396 vomer 0 true
-AAO AAO:0000634 vomerine canal part_of part_of UBERON:0002396 vomer 1 true
-AAO AAO:0000635 vomerine teeth equivalent_to UBERON:0004767 vomerine tooth 0 true
-AAO AAO:0000637 Wolffian duct equivalent_to UBERON:0003074 mesonephric duct 0 true
-AAO AAO:0000639 zygomatic ramus of squamosal part_of part_of UBERON:0001695 squamous part of temporal bone 2 true
-AAO AAO:0000640 arcus praeoccipitalis part_of part_of UBERON:0003129 skull 3 true
-AAO AAO:0000641 mandibular teeth part_of part_of UBERON:0003672 dentition 1 true
-AAO AAO:0000642 maxillopalatine teeth part_of part_of UBERON:0003672 dentition 1 true
-AAO AAO:0000643 nasolarimal duct equivalent_to UBERON:0002392 nasolacrimal duct 0 true
-AAO AAO:0000644 processus lingularis part_of part_of UBERON:0006813 nasal skeleton 1 true
-AAO AAO:0000645 corpus part_of part_of UBERON:0006813 nasal skeleton 2 true
-AAO AAO:0000646 margo libera part_of part_of UBERON:0006813 nasal skeleton 3 true
-AAO AAO:0000647 crista interna part_of part_of UBERON:0006813 nasal skeleton 4 true
-AAO AAO:0000648 crista praeopercularis part_of part_of UBERON:0003129 skull 5 true
-AAO AAO:0000649 anterior process of vomer part_of part_of UBERON:0002396 vomer 1 true
-AAO AAO:0000650 processus frontalis part_of part_of UBERON:0002397 maxilla 1 true
-AAO AAO:0000651 lamina anterior of maxilla part_of part_of UBERON:0002397 maxilla 1 true
-AAO AAO:0000652 fossa maxillaris part_of part_of UBERON:0002397 maxilla 1 true
-AAO AAO:0000653 pars glenoidalis of quadratojugal part_of part_of UBERON:0003277 skeleton of upper jaw 2 true
-AAO AAO:0000654 pars jugalis part_of part_of UBERON:0003277 skeleton of upper jaw 2 true
-AAO AAO:0000655 processus dorsalis part_of part_of UBERON:0001695 squamous part of temporal bone 2 true
-AAO AAO:0000656 processus posterodorsalis part_of part_of UBERON:0001695 squamous part of temporal bone 2 true
-AAO AAO:0000657 dentigerous process part_of part_of UBERON:0002396 vomer 1 true
-AAO AAO:0000658 prechoanal process part_of part_of UBERON:0002396 vomer 1 true
-AAO AAO:0000659 postchoanal process part_of part_of UBERON:0002396 vomer 1 true
-AAO AAO:0000660 margo choanalis part_of part_of UBERON:0002396 vomer 1 true
-AAO AAO:0000661 crista vomeri part_of part_of UBERON:0002396 vomer 1 true
-AAO AAO:0000662 processus posterior part_of part_of UBERON:0004745 parasphenoid 1 true
-AAO AAO:0000663 parahyoid part_of part_of UBERON:0001434 skeletal system 3 true
-AAO AAO:0000664 hyoid plate part_of part_of UBERON:0001434 skeletal system 3 true
-AAO AAO:0000668 hypoglossal sinus part_of part_of UBERON:0001434 skeletal system 3 true
-AAO AAO:0000669 hyale part_of part_of UBERON:0001434 skeletal system 3 true
-AAO AAO:0000670 anterior process of hyoid apparatus part_of part_of UBERON:0001434 skeletal system 3 true
-AAO AAO:0000671 anterolateral process of hyoid plate part_of part_of UBERON:0001434 skeletal system 4 true
-AAO AAO:0000672 posterolateral process part_of part_of UBERON:0001434 skeletal system 4 true
-AAO AAO:0000673 posteromedial process part_of part_of UBERON:0001434 skeletal system 4 true
-AAO AAO:0000674 arytenoid cartilage equivalent_to UBERON:0001740 arytenoid cartilage 0 true
-AAO AAO:0000675 cricoid cartilage equivalent_to UBERON:0002375 cricoid cartilage 0 true
-AAO AAO:0000676 bronchial process part_of part_of UBERON:0002375 cricoid cartilage 1 true
-AAO AAO:0000677 lateral process part_of part_of UBERON:0002375 cricoid cartilage 1 true
-AAO AAO:0000678 esophageal process part_of part_of UBERON:0002375 cricoid cartilage 1 true
-AAO AAO:0000679 humerus equivalent_to UBERON:0000976 humerus 0 true
-AAO AAO:0000680 manubrium equivalent_to UBERON:0002205 manubrium of sternum 0 true
-AAO AAO:0000681 hyoid apparatus opening part_of part_of UBERON:0001434 skeletal system 3 true
-AAO AAO:0000682 hyoid apparatus skeleton part_of part_of UBERON:0001434 skeletal system 3 true
-AAO AAO:0000683 sinus nervi hypoglossi part_of part_of UBERON:0001434 skeletal system 4 true
-AAO AAO:0000684 hyoid bone equivalent_to UBERON:0001685 hyoid bone 0 true
-AAO AAO:0000685 foramen nervi hypoglossi part_of part_of UBERON:0001434 skeletal system 4 true
-AAO AAO:0000686 basibranchial equivalent_to UBERON:0004740 basibranchial 0 true
-AAO AAO:0000687 processus confluens part_of part_of UBERON:0001434 skeletal system 4 true
-AAO AAO:0000688 prominentia apicalis dorsalis part_of part_of UBERON:0001740 arytenoid cartilage 1 true
-AAO AAO:0000689 prominentia apicalis ventralis part_of part_of UBERON:0001740 arytenoid cartilage 1 true
-AAO AAO:0000690 wrisbergi cartilage part_of part_of UBERON:0001434 skeletal system 3 true
-AAO AAO:0000691 vertebra equivalent_to UBERON:0002412 vertebra 0 true
-AAO AAO:0000692 pedicel part_of part_of UBERON:0002412 vertebra 1 true
-AAO AAO:0000693 neural canal equivalent_to UBERON:0006692 vertebral canal 0 true
-AAO AAO:0000694 atlantal cotyle part_of part_of UBERON:0001092 atlas 1 true
-AAO AAO:0000695 neural arch lamina equivalent_to UBERON:0004662 vertebra lamina 0 true
-AAO AAO:0000696 posterior intervertebral notch part_of part_of UBERON:0002412 vertebra 1 true
-AAO AAO:0000697 centrum equivalent_to UBERON:0001075 body of vertebra 0 true
-AAO AAO:0000698 transverse process equivalent_to UBERON:0003109 parapophysis 0 true
-AAO AAO:0000699 vertebral column skeleton equivalent_to UBERON:0001130 vertebral column 0 true
-AAO AAO:0000700 vertebral column opening subclass UBERON:0002090 postcranial axial skeleton 1 true
-AAO AAO:0000701 intervertebral space subclass UBERON:0002090 postcranial axial skeleton 2 true
-AAO AAO:0000702 postzygapophysis equivalent_to UBERON:0001080 inferior articular process of vertebra 0 true
-AAO AAO:0000703 prezygapophysis equivalent_to UBERON:0001079 superior articular process of vertebra 0 true
-AAO AAO:0000704 anterior intervertebral notch part_of part_of UBERON:0002412 vertebra 1 true
-AAO AAO:0000705 neural spine equivalent_to UBERON:0001076 spinous process of vertebra 0 true
-AAO AAO:0000706 diapophysis part_of part_of UBERON:0002412 vertebra 1 true
-AAO AAO:0000707 pleurapophysis part_of part_of UBERON:0002412 vertebra 1 true
-AAO AAO:0000708 parapophysis equivalent_to UBERON:0003109 parapophysis 0 true
-AAO AAO:0000709 atlas equivalent_to UBERON:0001092 atlas 0 true
-AAO AAO:0000710 zygapophysis equivalent_to UBERON:0006062 articular process of vertebra 0 true
-AAO AAO:0000711 procoelous subclass UBERON:0001075 body of vertebra 1 true
-AAO AAO:0000712 opisthocoelous subclass UBERON:0001075 body of vertebra 1 true
-AAO AAO:0000713 epichordal subclass UBERON:0001075 body of vertebra 1 true
-AAO AAO:0000714 perichordal subclass UBERON:0001075 body of vertebra 1 true
-AAO AAO:0000715 heterocoelous subclass UBERON:0001075 body of vertebra 1 true
-AAO AAO:0000716 acoelous subclass UBERON:0001075 body of vertebra 1 true
-AAO AAO:0000717 amphicoelous subclass UBERON:0001075 body of vertebra 1 true
-AAO AAO:0000718 ectochordal subclass UBERON:0001075 body of vertebra 1 true
-AAO AAO:0000719 holochordal subclass UBERON:0001075 body of vertebra 1 true
-AAO AAO:0000720 stegochordal subclass UBERON:0001075 body of vertebra 1 true
-AAO AAO:0000721 odontoid process equivalent_to UBERON:0004096 odontoid process 0 true
-AAO AAO:0000722 tuberculum part_of part_of UBERON:0002228 rib 1 true
-AAO AAO:0000723 capitulum of rib part_of part_of UBERON:0002228 rib 1 true
-AAO AAO:0000724 sacral region equivalent_to UBERON:0005473 sacral region 0 true
-AAO AAO:0000725 neural arch equivalent_to UBERON:0003861 vertebral arch 0 true
-AAO AAO:0000726 haemal arch equivalent_to UBERON:0006065 hemal arch 0 true
-AAO AAO:0000727 haemal arch lamina part_of part_of UBERON:0006065 hemal arch 1 true
-AAO AAO:0000728 nucal keel part_of part_of UBERON:0001092 atlas 1 true
-AAO AAO:0000729 spinal foramen equivalent_to UBERON:0001131 vertebral foramen 0 true
-AAO AAO:0000730 foramen nutritium subclass UBERON:0002090 postcranial axial skeleton 2 true
-AAO AAO:0000731 coccyx equivalent_to UBERON:0001350 coccyx 0 true
-AAO AAO:0000732 urostyle equivalent_to UBERON:0003106 urostyle 0 true
-AAO AAO:0000733 hypochord equivalent_to UBERON:0003058 hypochord 0 true
-AAO AAO:0000734 vertebral column equivalent_to UBERON:0001130 vertebral column 0 true
-AAO AAO:0000735 mid-dorsal keel part_of part_of UBERON:0003861 vertebral arch 1 true
-AAO AAO:0000736 crista ventralis part_of part_of UBERON:0000976 humerus 1 true
-AAO AAO:0000737 perichordal tube part_of part_of UBERON:0002328 notochord 1 true
-AAO AAO:0000738 perichordal ring part_of part_of UBERON:0002328 notochord 2 true
-AAO AAO:0000739 spinous process part_of part_of UBERON:0003861 vertebral arch 1 true
-AAO AAO:0000740 synsacrum part_of part_of UBERON:0005473 sacral region 1 true
-AAO AAO:0000741 uncinate process part_of part_of UBERON:0002228 rib 1 true
-AAO AAO:0000742 epiphysis equivalent_to UBERON:0001437 epiphysis 0 true
-AAO AAO:0000743 sacral condyle part_of part_of UBERON:0003690 sacrum 1 true
-AAO AAO:0000744 urostyle cotyle part_of part_of UBERON:0003106 urostyle 1 true
-AAO AAO:0000745 webbing of bone part_of part_of UBERON:0001130 vertebral column 1 true
-AAO AAO:0000746 urostyle ridge part_of part_of UBERON:0003106 urostyle 1 true
-AAO AAO:0000747 appendicular skeleton equivalent_to UBERON:0002091 appendicular skeleton 0 true
-AAO AAO:0000748 suprascapula part_of part_of UBERON:0006850 tetratpod pectoral girdle 3 true
-AAO AAO:0000749 glenoid fossa equivalent_to UBERON:0006657 glenoid fossa 0 true
-AAO AAO:0000750 cleithrum equivalent_to UBERON:0004741 cleithrum 0 true
-AAO AAO:0000751 scapula equivalent_to UBERON:0001124 tetrapod scapula 0 true
-AAO AAO:0000752 pars acromialis part_of part_of UBERON:0001124 tetrapod scapula 1 true
-AAO AAO:0000753 pars glenoidalis of scapula part_of part_of UBERON:0001124 tetrapod scapula 1 true
-AAO AAO:0000754 pectoral girdle skeleton subclass UBERON:0006850 tetratpod pectoral girdle 1 true
-AAO AAO:0000755 pectoral girdle opening subclass UBERON:0006850 tetratpod pectoral girdle 1 true
-AAO AAO:0000756 crista dorsalis part_of part_of UBERON:0000976 humerus 1 true
-AAO AAO:0000757 zonal area part_of part_of UBERON:0006850 tetratpod pectoral girdle 2 true
-AAO AAO:0000758 lateral epicondyle equivalent_to UBERON:0006807 lateral epicondyle of humerus 0 true
-AAO AAO:0000759 omosternum part_of part_of UBERON:0006850 tetratpod pectoral girdle 4 true
-AAO AAO:0000760 procoracoid part_of part_of UBERON:0006850 tetratpod pectoral girdle 4 true
-AAO AAO:0000761 clavicle equivalent_to UBERON:0001105 clavicle 0 true
-AAO AAO:0000762 epicoracoid part_of part_of UBERON:0006850 tetratpod pectoral girdle 4 true
-AAO AAO:0000763 epicoracoid bridge part_of part_of UBERON:0006850 tetratpod pectoral girdle 5 true
-AAO AAO:0000764 coracoid equivalent_to UBERON:0004743 coracoid 0 true
-AAO AAO:0000765 sternum equivalent_to UBERON:0000975 vertebrate sternum 0 true
-AAO AAO:0000767 pelvic girdle opening subclass UBERON:0001271 pelvic girdle 1 true
-AAO AAO:0000768 pelvic girdle skeleton subclass UBERON:0001271 pelvic girdle 1 true
-AAO AAO:0000769 pelvic girdle symphisis part_of part_of UBERON:0001271 pelvic girdle 1 true
-AAO AAO:0000770 acetabulum equivalent_to UBERON:0001269 acetabular part of hip bone 0 true
-AAO AAO:0000771 acetabular depression subclass UBERON:0001271 pelvic girdle 2 true
-AAO AAO:0000772 ilium equivalent_to UBERON:0001273 ilium 0 true
-AAO AAO:0000773 ilial ridge part_of part_of UBERON:0001273 ilium 2 true
-AAO AAO:0000774 ilial shaft part_of part_of UBERON:0001273 ilium 1 true
-AAO AAO:0000775 ilial corpus part_of part_of UBERON:0001273 ilium 1 true
-AAO AAO:0000776 glenoid foramen subclass UBERON:0006850 tetratpod pectoral girdle 2 true
-AAO AAO:0000777 epicoracoid horn part_of part_of UBERON:0006850 tetratpod pectoral girdle 5 true
-AAO AAO:0000778 supracoracoid foramen subclass UBERON:0006850 tetratpod pectoral girdle 2 true
-AAO AAO:0000779 pectoral fenestra subclass UBERON:0006850 tetratpod pectoral girdle 2 true
-AAO AAO:0000780 incisura coracoidea part_of part_of UBERON:0006850 tetratpod pectoral girdle 3 true
-AAO AAO:0000781 scapulocoracoid equivalent_to UBERON:0004753 scapulocoracoid 0 true
-AAO AAO:0000782 medial epicondyle equivalent_to UBERON:0006806 medial epicondyle of humerus 0 true
-AAO AAO:0000783 fovea capitis part_of part_of UBERON:0000976 humerus 1 true
-AAO AAO:0000784 ulnar condyle part_of part_of UBERON:0000976 humerus 1 true
-AAO AAO:0000785 trochlear groove of humerus part_of part_of UBERON:0000976 humerus 1 true
-AAO AAO:0000786 fossa cubitalis ventralis part_of part_of UBERON:0000976 humerus 1 true
-AAO AAO:0000787 collum antibrachii part_of part_of UBERON:0001440 forelimb skeleton 2 true
-AAO AAO:0000788 radius equivalent_to UBERON:0001423 radius 0 true
-AAO AAO:0000789 ulna equivalent_to UBERON:0001424 ulna 0 true
-AAO AAO:0000790 radiale part_of part_of UBERON:0001440 forelimb skeleton 2 true
-AAO AAO:0000791 episternum part_of part_of UBERON:0006850 tetratpod pectoral girdle 4 true
-AAO AAO:0000792 anterior ramus of cleithrum part_of part_of UBERON:0004741 cleithrum 1 true
-AAO AAO:0000793 anomocoelous subclass UBERON:0001075 body of vertebra 1 true
-AAO AAO:0000794 displasiocoelous subclass UBERON:0001075 body of vertebra 1 true
-AAO AAO:0000795 intervertebral cartilage part_of part_of UBERON:0002412 vertebra 1 true
-AAO AAO:0000796 imbricate neural arch subclass UBERON:0003861 vertebral arch 1 true
-AAO AAO:0000797 non-imbricate neural arch subclass UBERON:0003861 vertebral arch 1 true
-AAO AAO:0000798 presacral shield part_of part_of UBERON:0001130 vertebral column 2 true
-AAO AAO:0000799 cartilago paraglenoidalis part_of part_of UBERON:0006850 tetratpod pectoral girdle 3 true
-AAO AAO:0000800 intercotylar space part_of part_of UBERON:0001092 atlas 1 true
-AAO AAO:0000801 caput glenoidale part_of part_of UBERON:0001075 body of vertebra 1 true
-AAO AAO:0000802 fossa glenoidalis part_of part_of UBERON:0001075 body of vertebra 1 true
-AAO AAO:0000803 sulcus articularis lateralis part_of part_of UBERON:0006062 articular process of vertebra 1 true
-AAO AAO:0000804 sulcus articularis medialis part_of part_of UBERON:0006062 articular process of vertebra 1 true
-AAO AAO:0000805 carina proximalis part_of part_of UBERON:0006062 articular process of vertebra 1 true
-AAO AAO:0000806 carina medialis part_of part_of UBERON:0006062 articular process of vertebra 1 true
-AAO AAO:0000807 carina distalis part_of part_of UBERON:0006062 articular process of vertebra 1 true
-AAO AAO:0000808 parasagittal processes part_of part_of UBERON:0003861 vertebral arch 1 true
-AAO AAO:0000809 accessory articulation part_of part_of UBERON:0002412 vertebra 1 true
-AAO AAO:0000810 fissura sagittalis part_of part_of UBERON:0003106 urostyle 2 true
-AAO AAO:0000811 glenoid end of clavicle part_of part_of UBERON:0001105 clavicle 1 true
-AAO AAO:0000812 sternal end of clavicle equivalent_to UBERON:0006805 sternal end of clavicle 0 true
-AAO AAO:0000813 sulcus pro cartilagine praecoracoidealis part_of part_of UBERON:0001105 clavicle 1 true
-AAO AAO:0000814 glenoid head of coracoid part_of part_of UBERON:0004743 coracoid 1 true
-AAO AAO:0000815 sternal head of coracoid part_of part_of UBERON:0004743 coracoid 1 true
-AAO AAO:0000816 margo fenestralis part_of part_of UBERON:0004743 coracoid 1 true
-AAO AAO:0000817 margo posterior part_of part_of UBERON:0004743 coracoid 1 true
-AAO AAO:0000818 margo anterior of scapula part_of part_of UBERON:0001124 tetrapod scapula 1 true
-AAO AAO:0000819 margo clavicularis part_of part_of UBERON:0001124 tetrapod scapula 1 true
-AAO AAO:0000820 margo posterior of scapula part_of part_of UBERON:0001124 tetrapod scapula 1 true
-AAO AAO:0000821 margo suprascapularis part_of part_of UBERON:0001124 tetrapod scapula 1 true
-AAO AAO:0000822 pars suprascapularis part_of part_of UBERON:0001124 tetrapod scapula 1 true
-AAO AAO:0000823 sinus interglenoidalis part_of part_of UBERON:0001124 tetrapod scapula 1 true
-AAO AAO:0000824 tenuitas cristaeformis part_of part_of UBERON:0001124 tetrapod scapula 1 true
-AAO AAO:0000825 crista longitudinalis part_of part_of UBERON:0001124 tetrapod scapula 1 true
-AAO AAO:0000826 acromion equivalent_to UBERON:0002497 acromion 0 true
-AAO AAO:0000827 margo anterior of cleithrum part_of part_of UBERON:0004741 cleithrum 1 true
-AAO AAO:0000828 margo posterior of cleithrum part_of part_of UBERON:0004741 cleithrum 1 true
-AAO AAO:0000829 margo scapularis part_of part_of UBERON:0004741 cleithrum 1 true
-AAO AAO:0000830 margo vertebralis part_of part_of UBERON:0004741 cleithrum 1 true
-AAO AAO:0000831 spina acromioidea part_of part_of UBERON:0004741 cleithrum 1 true
-AAO AAO:0000832 anterior lamina recurvata part_of part_of UBERON:0004741 cleithrum 1 true
-AAO AAO:0000833 sinus dorsalis part_of part_of UBERON:0004741 cleithrum 1 true
-AAO AAO:0000834 posterior lamina recurvata part_of part_of UBERON:0004741 cleithrum 1 true
-AAO AAO:0000835 glenoid head part_of part_of UBERON:0000976 humerus 1 true
-AAO AAO:0000836 crista lateralis part_of part_of UBERON:0000976 humerus 1 true
-AAO AAO:0000837 crista medialis part_of part_of UBERON:0000976 humerus 1 true
-AAO AAO:0000838 humeral head equivalent_to UBERON:0006801 head of humerus 0 true
-AAO AAO:0000839 crista radii part_of part_of UBERON:0001423 radius 1 true
-AAO AAO:0000840 capitulum of radius part_of part_of UBERON:0001423 radius 1 true
-AAO AAO:0000841 capitulum radii part_of part_of UBERON:0001423 radius 1 true
-AAO AAO:0000842 capitulum ulnae part_of part_of UBERON:0001424 ulna 1 true
-AAO AAO:0000843 olecranon equivalent_to UBERON:0006810 olecranon 0 true
-AAO AAO:0000844 sulcus longitudinalis part_of part_of UBERON:0006715 radio-ulna 1 true
-AAO AAO:0000845 ulnare equivalent_to UBERON:0002445 triquetral 0 true
-AAO AAO:0000846 element Y of fore mesopodium part_of part_of UBERON:0001440 forelimb skeleton 2 true
-AAO AAO:0000847 distal carpal equivalent_to UBERON:0001481 distal carpal bone 0 true
-AAO AAO:0000848 carpal 2(1) subclass UBERON:0001481 distal carpal bone 1 true
-AAO AAO:0000849 carpal 3(2) subclass UBERON:0001481 distal carpal bone 1 true
-AAO AAO:0000850 carpal 4(3) subclass UBERON:0001481 distal carpal bone 1 true
-AAO AAO:0000851 carpal 5(4) subclass UBERON:0001481 distal carpal bone 1 true
-AAO AAO:0000852 prepollex equivalent_to UBERON:0005880 prepollex 0 true
-AAO AAO:0000853 metacarpal II(I) subclass UBERON:0004453 metacarpus 1 true
-AAO AAO:0000854 metacarpal III(II) subclass UBERON:0004453 metacarpus 1 true
-AAO AAO:0000855 metacarpal V(IV) subclass UBERON:0004453 metacarpus 1 true
-AAO AAO:0000856 intercalary element of fore digit part_of part_of UBERON:0002389 finger 1 true
-AAO AAO:0000857 fore digit equivalent_to UBERON:0002389 finger 0 true
-AAO AAO:0000858 forelimb opening subclass UBERON:0002102 forelimb 1 true
-AAO AAO:0000859 foramen perforans carpi part_of part_of UBERON:0002389 finger 2 true
-AAO AAO:0000860 ischium equivalent_to UBERON:0001274 ischium 0 true
-AAO AAO:0000861 pubis equivalent_to UBERON:0001275 pubis 0 true
-AAO AAO:0000862 pubo-ischium part_of part_of UBERON:0001271 pelvic girdle 2 true
-AAO AAO:0000863 obturator foramen equivalent_to UBERON:0006803 obturator foramen 0 true
-AAO AAO:0000864 acetabular rim equivalent_to UBERON:0006802 acetabular rim 0 true
-AAO AAO:0000865 epileon part_of part_of UBERON:0001273 ilium 2 true
-AAO AAO:0000866 agger limitans anterior part_of part_of UBERON:0001273 ilium 2 true
-AAO AAO:0000867 agger limitans posterior part_of part_of UBERON:0001274 ischium 1 true
-AAO AAO:0000868 supra-acetabular expansion part_of part_of UBERON:0001273 ilium 2 true
-AAO AAO:0000869 ilial protuberance part_of part_of UBERON:0001273 ilium 2 true
-AAO AAO:0000870 preacetabular expansion part_of part_of UBERON:0001273 ilium 2 true
-AAO AAO:0000871 fossula tuberis superioris part_of part_of UBERON:0001273 ilium 2 true
-AAO AAO:0000872 collum ilei part_of part_of UBERON:0001273 ilium 2 true
-AAO AAO:0000873 pars cylindriformis ilei part_of part_of UBERON:0001273 ilium 2 true
-AAO AAO:0000874 crista ischii part_of part_of UBERON:0001274 ischium 1 true
-AAO AAO:0000875 spina pelvis posterior part_of part_of UBERON:0001274 ischium 1 true
-AAO AAO:0000876 spina pelvis anterior part_of part_of UBERON:0001273 ilium 2 true
-AAO AAO:0000877 intumescentia bilateralis inferior part_of part_of UBERON:0001274 ischium 1 true
-AAO AAO:0000878 intumescentia bilateralis superior part_of part_of UBERON:0001274 ischium 1 true
-AAO AAO:0000879 incisura terminalis part_of part_of UBERON:0001274 ischium 1 true
-AAO AAO:0000880 crista hypertrophica part_of part_of UBERON:0001274 ischium 1 true
-AAO AAO:0000881 lamina terminalis equivalent_to UBERON:0005078 lamina terminalis 0 true
-AAO AAO:0000882 interilial region part_of part_of UBERON:0001273 ilium 1 true
-AAO AAO:0000883 recessus coccygealis part_of part_of UBERON:0001273 ilium 2 true
-AAO AAO:0000884 epipubis part_of part_of UBERON:0001271 pelvic girdle 2 true
-AAO AAO:0000885 postpubis part_of part_of UBERON:0001271 pelvic girdle 2 true
-AAO AAO:0000886 ypsiloid cartilage part_of part_of UBERON:0001271 pelvic girdle 2 true
-AAO AAO:0000887 hind propodium subclass UBERON:0001441 hindlimb skeleton 1 true
-AAO AAO:0000888 hind digit equivalent_to UBERON:0000027 hind digit 0 true
-AAO AAO:0000889 femur equivalent_to UBERON:0000981 femur 0 true
-AAO AAO:0000890 tibia equivalent_to UBERON:0000979 tibia 0 true
-AAO AAO:0000891 fibula equivalent_to UBERON:0001446 fibula 0 true
-AAO AAO:0000892 acetabular head part_of part_of UBERON:0000981 femur 1 true
-AAO AAO:0000893 distal head part_of part_of UBERON:0000981 femur 1 true
-AAO AAO:0000894 femoral ridge part_of part_of UBERON:0000981 femur 1 true
-AAO AAO:0000895 trochlear groove of femur part_of part_of UBERON:0000981 femur 2 true
-AAO AAO:0000896 foveal depression part_of part_of UBERON:0000981 femur 2 true
-AAO AAO:0000897 femoral trochanter part_of part_of UBERON:0000981 femur 1 true
-AAO AAO:0000898 trochanteric crest part_of part_of UBERON:0000981 femur 1 true
-AAO AAO:0000899 tibial condyle part_of part_of UBERON:0000981 femur 2 true
-AAO AAO:0000900 fibular condyle part_of part_of UBERON:0000981 femur 2 true
-AAO AAO:0000901 radio-ulna equivalent_to UBERON:0006715 radio-ulna 0 true
-AAO AAO:0000902 tibiofibula equivalent_to UBERON:0006714 tibiofibula 0 true
-AAO AAO:0000903 tibial crest part_of part_of UBERON:0000979 tibia 1 true
-AAO AAO:0000904 apophysis distalis of tibiofibula part_of part_of UBERON:0006714 tibiofibula 1 true
-AAO AAO:0000905 caput ossis cruris part_of part_of UBERON:0006714 tibiofibula 1 true
-AAO AAO:0000906 sulcus pro musculo extensori cruris brevis part_of part_of UBERON:0006714 tibiofibula 1 true
-AAO AAO:0000907 eminentia arcuata part_of part_of UBERON:0006714 tibiofibula 1 true
-AAO AAO:0000908 sulcus distalis ossis cruris part_of part_of UBERON:0006714 tibiofibula 1 true
-AAO AAO:0000909 sulcus proximalis ossis cruris part_of part_of UBERON:0006714 tibiofibula 1 true
-AAO AAO:0000910 hind limb opening subclass UBERON:0002103 hindlimb 1 true
-AAO AAO:0000911 foramen nutritium exterius subclass UBERON:0002103 hindlimb 2 true
-AAO AAO:0000912 tibiale equivalent_to UBERON:0006836 medial tibial tarsal bone 0 true
-AAO AAO:0000913 fibulare equivalent_to UBERON:0001450 calcaneus 0 true
-AAO AAO:0000914 distal tarsal part_of part_of UBERON:0001447 tarsal bone 1 true
-AAO AAO:0000915 spatium intertarsale subclass UBERON:0002103 hindlimb 2 true
-AAO AAO:0000916 apophysis proximalis part_of part_of UBERON:0001447 tarsal bone 1 true
-AAO AAO:0000917 apophysis distalis of tibiale fibulare part_of part_of UBERON:0001447 tarsal bone 1 true
-AAO AAO:0000918 tarsal 1 part_of part_of UBERON:0001447 tarsal bone 2 true
-AAO AAO:0000919 tarsal 2 part_of part_of UBERON:0001447 tarsal bone 2 true
-AAO AAO:0000920 tarsal 3 part_of part_of UBERON:0001447 tarsal bone 2 true
-AAO AAO:0000921 element Y of hind mesopodium part_of part_of UBERON:0001447 tarsal bone 1 true
-AAO AAO:0000922 prehallux part_of part_of UBERON:0001447 tarsal bone 1 true
-AAO AAO:0000923 intermedium part_of part_of UBERON:0001447 tarsal bone 1 true
-AAO AAO:0000924 centrale equivalent_to UBERON:0001451 navicular bone of foot 0 true
-AAO AAO:0000925 metatarsal I equivalent_to UBERON:0003650 metatarsal bone of digit 1 0 true
-AAO AAO:0000926 metatarsal II equivalent_to UBERON:0003651 metatarsal bone of digit 2 0 true
-AAO AAO:0000927 metatarsal III equivalent_to UBERON:0003652 metatarsal bone of digit 3 0 true
-AAO AAO:0000928 metatarsal IV equivalent_to UBERON:0003653 metatarsal bone of digit 4 0 true
-AAO AAO:0000929 metatarsal V equivalent_to UBERON:0003654 metatarsal bone of digit 5 0 true
-AAO AAO:0000930 phalanges of hind digit equivalent_to UBERON:0001449 phalanx of toe 0 true
-AAO AAO:0000931 intercalary element of hind digit part_of part_of UBERON:0000027 hind digit 1 true
-AAO AAO:0000932 tarsal 4 part_of part_of UBERON:0001447 tarsal bone 2 true
-AAO AAO:0000933 tarsal 5 part_of part_of UBERON:0001447 tarsal bone 2 true
-AAO AAO:0000934 foramen perforans tarsi subclass UBERON:0002103 hindlimb 2 true
-AAO AAO:0000935 scapular area part_of part_of UBERON:0006850 tetratpod pectoral girdle 2 true
-AAO AAO:0000936 zonal element part_of part_of UBERON:0006850 tetratpod pectoral girdle 3 true
-AAO AAO:0000937 prezonal element part_of part_of UBERON:0006850 tetratpod pectoral girdle 3 true
-AAO AAO:0000938 postzonal element part_of part_of UBERON:0006850 tetratpod pectoral girdle 3 true
-AAO AAO:0000939 mesosternum equivalent_to UBERON:0006820 body of sternum 0 true
-AAO AAO:0000940 xiphisternum equivalent_to UBERON:0006430 xiphoid cartilage 0 true
-AAO AAO:0000941 arciferal girdle subclass UBERON:0006850 tetratpod pectoral girdle 1 true
-AAO AAO:0000942 firmisternal girdle subclass UBERON:0006850 tetratpod pectoral girdle 1 true
-AAO AAO:0000943 pseudofirmisternal girdle subclass UBERON:0006850 tetratpod pectoral girdle 1 true
-AAO AAO:0000944 pseudoarciferal girdle subclass UBERON:0006850 tetratpod pectoral girdle 1 true
-AAO AAO:0000945 inscriptional rib part_of part_of UBERON:0006850 tetratpod pectoral girdle 4 true
-AAO AAO:0000946 fore metapodium equivalent_to UBERON:0004453 metacarpus 0 true
-AAO AAO:0000947 phalanges of fore digit equivalent_to UBERON:0001436 phalanx of finger 0 true
-AAO AAO:0000948 articular process part_of part_of UBERON:0002375 cricoid cartilage 1 true
-AAO AAO:0000949 posterior ramus of cleithrum part_of part_of UBERON:0004741 cleithrum 1 true
-AAO AAO:0000950 os triangulare part_of part_of UBERON:0001434 skeletal system 4 true
-AAO AAO:0000951 anterior radial part_of part_of UBERON:0001434 skeletal system 4 true
-AAO AAO:0000952 posterior radial part_of part_of UBERON:0001434 skeletal system 4 true
-AAO AAO:0000953 ceratobranchials II--IV part_of part_of UBERON:0001434 skeletal system 4 true
-AAO AAO:0000954 hypobranchial I part_of part_of UBERON:0001434 skeletal system 4 true
-AAO AAO:0000955 ceratobranchial I part_of part_of UBERON:0001434 skeletal system 4 true
-AAO AAO:0000956 hypobranchial II part_of part_of UBERON:0001434 skeletal system 4 true
-AAO AAO:0000957 basihyal part_of part_of UBERON:0001434 skeletal system 4 true
-AAO AAO:0000958 hypohyal equivalent_to UBERON:0004751 hypohyal bone 0 true
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2,266 uberon-map-from-EHDAA.tbl
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2,180 uberon-map-from-EHDAA2.tbl
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5,107 uberon-map-from-EMAPA.tbl
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10,647 uberon-map-from-FBbt.tbl
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91,275 uberon-map-from-FMA.tbl
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3,008 uberon-map-from-MA.tbl
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835 uberon-map-from-XAO.tbl
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-XAO XAO:0000001 ectoderm equivalent_to UBERON:0000924 ectoderm 0 true
-XAO XAO:0000002 fin equivalent_to UBERON:0002534 fin 0 true
-XAO XAO:0000003 outer fin subclass UBERON:0002534 fin 1 true
-XAO XAO:0000004 inner fin subclass UBERON:0002534 fin 1 true
-XAO XAO:0000005 olfactory placode equivalent_to UBERON:0003050 olfactory placode 0 true
-XAO XAO:0000006 otic vesicle equivalent_to UBERON:0003051 ear vesicle 0 true
-XAO XAO:0000007 lower eyelid equivalent_to UBERON:0001713 lower eyelid 0 true
-XAO XAO:0000008 lens equivalent_to UBERON:0000965 lens 0 true
-XAO XAO:0000009 retina equivalent_to UBERON:0000966 retina 0 true
-XAO XAO:0000010 brain equivalent_to UBERON:0000955 brain 0 true
-XAO XAO:0000011 forebrain equivalent_to UBERON:0001890 forebrain 0 true
-XAO XAO:0000012 telencephalon equivalent_to UBERON:0001893 telencephalon 0 true
-XAO XAO:0000013 diencephalon equivalent_to UBERON:0001894 diencephalon 0 true
-XAO XAO:0000014 midbrain equivalent_to UBERON:0001891 midbrain 0 true
-XAO XAO:0000015 hindbrain equivalent_to UBERON:0002028 hindbrain 0 true
-XAO XAO:0000016 midbrain-hindbrain boundary equivalent_to UBERON:0003052 midbrain-hindbrain boundary 0 true
-XAO XAO:0000017 hypophysis equivalent_to UBERON:0000007 pituitary gland 0 true
-XAO XAO:0000018 genital ridge equivalent_to UBERON:0005294 genital ridge 0 true
-XAO XAO:0000020 spinal cord equivalent_to UBERON:0002240 spinal cord 0 true
-XAO XAO:0000021 ventricular zone equivalent_to UBERON:0003053 ventricular zone 0 true
-XAO XAO:0000022 roof plate equivalent_to UBERON:0005724 roof plate spinal cord region 0 true
-XAO XAO:0000023 skin equivalent_to UBERON:0002097 skin of body 0 true
-XAO XAO:0000024 mandibular crest equivalent_to UBERON:0007098 mandibular neural crest 0 true
-XAO XAO:0000025 hyoid crest equivalent_to UBERON:0007099 hyoid neural crest 0 true
-XAO XAO:0000026 branchial crest part_of part_of UBERON:0003099 cranial neural crest 1 true
-XAO XAO:0000027 cranial ganglion equivalent_to UBERON:0003213 cranial ganglion 0 true
-XAO XAO:0000028 epidermis equivalent_to UBERON:0001003 epidermis 0 true
-XAO XAO:0000029 epidermis outer layer equivalent_to UBERON:0003055 outermost layer of epidermis 0 true
-XAO XAO:0000030 vitelline membrane equivalent_to UBERON:0003125 vitelline membrane 0 true
-XAO XAO:0000031 ciliated epidermal cell part_of part_of UBERON:0001003 epidermis 1 true
-XAO XAO:0000032 stomodeal-hypophyseal primordium subclass UBERON:0001048 primordium 1 true
-XAO XAO:0000033 cement gland equivalent_to UBERON:0005093 cement gland 0 true
-XAO XAO:0000034 hatching gland equivalent_to UBERON:0002538 hatching gland 0 true
-XAO XAO:0000035 zygote equivalent_to CL:0000365 zygote 0 true
-XAO XAO:0000036 animal cap part_of part_of UBERON:0000924 ectoderm 1 true
-XAO XAO:0000037 animal cap inner layer part_of part_of UBERON:0000924 ectoderm 2 true
-XAO XAO:0000038 animal cap outer layer part_of part_of UBERON:0000924 ectoderm 2 true
-XAO XAO:0000040 head region equivalent_to UBERON:0001444 subdivision of head 0 true
-XAO XAO:0000041 epidermis inner layer equivalent_to UBERON:0002025 basal cell layer of epidermis 0 true
-XAO XAO:0000042 neuroectoderm equivalent_to UBERON:0002346 neural ectoderm 0 true
-XAO XAO:0000043 neuroectoderm outer layer part_of part_of UBERON:0002346 neural ectoderm 1 true
-XAO XAO:0000044 neuroectoderm inner layer part_of part_of UBERON:0002346 neural ectoderm 1 true
-XAO XAO:0000045 pre-chordal neural plate equivalent_to UBERON:0003056 pre-chordal neural plate 0 true
-XAO XAO:0000046 chordal neural plate equivalent_to UBERON:0003057 chordal neural plate 0 true
-XAO XAO:0000047 notoplate part_of part_of UBERON:0003075 neural plate 1 true
-XAO XAO:0000048 neural crest equivalent_to UBERON:0002342 neural crest 0 true
-XAO XAO:0000049 cement gland primordium subclass UBERON:0001048 primordium 1 true
-XAO XAO:0000050 mesoderm equivalent_to UBERON:0000926 mesoderm 0 true
-XAO XAO:0000051 dorsal aorta equivalent_to UBERON:0005805 dorsal aorta 0 true
-XAO XAO:0000052 cardinal vein equivalent_to UBERON:0004344 cardinal vein 0 true
-XAO XAO:0000053 head mesoderm equivalent_to UBERON:0005280 head mesoderm 0 true
-XAO XAO:0000055 notochord equivalent_to UBERON:0002328 notochord 0 true
-XAO XAO:0000056 hypochord equivalent_to UBERON:0003058 hypochord 0 true
-XAO XAO:0000057 presomitic mesoderm equivalent_to UBERON:0003059 presomitic mesoderm 0 true
-XAO XAO:0000058 somite equivalent_to UBERON:0002329 somite 0 true
-XAO XAO:0000062 nephrostome equivalent_to UBERON:0005308 nephrostome 0 true
-XAO XAO:0000063 pronephric duct equivalent_to UBERON:0003060 pronephric duct 0 true
-XAO XAO:0000064 heart equivalent_to UBERON:0000948 heart 0 true
-XAO XAO:0000065 myocardium equivalent_to UBERON:0002349 myocardium 0 true
-XAO XAO:0000066 endocardium equivalent_to UBERON:0002165 endocardium 0 true
-XAO XAO:0000067 blood island equivalent_to UBERON:0003061 blood island 0 true
-XAO XAO:0000068 marginal zone equivalent_to UBERON:0004879 marginal zone of embryo 0 true
-XAO XAO:0000069 ventral marginal zone subclass UBERON:0004879 marginal zone of embryo 1 true
-XAO XAO:0000070 ventro-lateral marginal zone subclass UBERON:0004879 marginal zone of embryo 1 true
-XAO XAO:0000071 dorso-lateral marginal zone subclass UBERON:0004879 marginal zone of embryo 1 true
-XAO XAO:0000072 dorsal marginal zone equivalent_to UBERON:0003062 primitive knot 0 true
-XAO XAO:0000074 involuting marginal zone subclass UBERON:0004879 marginal zone of embryo 1 true
-XAO XAO:0000075 involuting marginal zone mesenchymal layer part_of part_of UBERON:0004879 marginal zone of embryo 2 true
-XAO XAO:0000076 involuting marginal zone epithelial layer part_of part_of UBERON:0004879 marginal zone of embryo 2 true
-XAO XAO:0000077 bottle cell subclass CL:0000361 gastrula cell 1 true
-XAO XAO:0000078 blastopore lip part_of part_of UBERON:0000100 blastopore 1 true
-XAO XAO:0000079 prechordal plate equivalent_to UBERON:0003063 prechordal plate 0 true
-XAO XAO:0000082 circumblastoporal collar develops_from develops_from UBERON:0000926 mesoderm 1 true
-XAO XAO:0000082 circumblastoporal collar subclass UBERON:0002050 embryonic structure 1 true
-XAO XAO:0000083 involuted dorsal mesoderm develops_from develops_from UBERON:0000926 mesoderm 2 true
-XAO XAO:0000083 involuted dorsal mesoderm part_of part_of UBERON:0002050 embryonic structure 2 true
-XAO XAO:0000084 involuted ventral mesoderm develops_from develops_from UBERON:0000926 mesoderm 2 true
-XAO XAO:0000084 involuted ventral mesoderm part_of part_of UBERON:0002050 embryonic structure 2 true
-XAO XAO:0000085 intermediate mesoderm equivalent_to UBERON:0003064 intermediate mesoderm 0 true
-XAO XAO:0000086 ciliary marginal zone equivalent_to UBERON:0003065 ciliary marginal zone 0 true
-XAO XAO:0000087 tail region equivalent_to UBERON:0006071 caudal region 0 true
-XAO XAO:0000088 upper blastopore lip part_of part_of UBERON:0000100 blastopore 2 true
-XAO XAO:0000089 lower blastopore lip part_of part_of UBERON:0000100 blastopore 2 true
-XAO XAO:0000090 endoderm equivalent_to UBERON:0000925 endoderm 0 true
-XAO XAO:0000091 head endoderm part_of part_of UBERON:0000925 endoderm 1 true
-XAO XAO:0000092 archenteron equivalent_to UBERON:0004735 archenteron 0 true
-XAO XAO:0000093 archenteron floor part_of part_of UBERON:0004735 archenteron 1 true
-XAO XAO:0000094 archenteron roof part_of part_of UBERON:0004735 archenteron 1 true
-XAO XAO:0000095 lateral line system equivalent_to UBERON:0002540 lateral line system 0 true
-XAO XAO:0000096 pharyngeal arch equivalent_to UBERON:0002539 pharyngeal arch 0 true
-XAO XAO:0000097 mandibular arch equivalent_to UBERON:0004362 mandibular arch 0 true
-XAO XAO:0000098 hyoid arch equivalent_to UBERON:0003066 hyoid arch 0 true
-XAO XAO:0000099 branchial arch equivalent_to UBERON:0002539 pharyngeal arch 0 true
-XAO XAO:0000100 cardiovascular system equivalent_to UBERON:0004535 cardiovascular system 0 true
-XAO XAO:0000101 liver diverticulum equivalent_to UBERON:0004912 biliary bud 0 true
-XAO XAO:0000102 visceral pouch 1 equivalent_to UBERON:0007122 visceral pouch 1 0 true
-XAO XAO:0000103 midgut equivalent_to UBERON:0001045 midgut 0 true
-XAO XAO:0000104 hindgut equivalent_to UBERON:0001046 hindgut 0 true
-XAO XAO:0000105 pharyngeal cavity equivalent_to UBERON:0001731 cavity of pharynx 0 true
-XAO XAO:0000106 post-anal gut part_of part_of UBERON:0004735 archenteron 1 true
-XAO XAO:0000107 tail bud equivalent_to UBERON:0002533 tail bud 0 true
-XAO XAO:0000108 chordoneural hinge equivalent_to UBERON:0007097 chordo neural hinge 0 true
-XAO XAO:0000109 posterior wall of neurenteric canal part_of part_of UBERON:0002533 tail bud 1 true
-XAO XAO:0000110 glomeral mesenchyme equivalent_to UBERON:0007128 glomeral mesenchyme 0 true
-XAO XAO:0000111 germ cell equivalent_to CL:0000586 germ cell 0 true
-XAO XAO:0000113 embryo equivalent_to UBERON:0000922 embryo 0 true
-XAO XAO:0000114 artery equivalent_to UBERON:0001637 artery 0 true
-XAO XAO:0000115 vein equivalent_to UBERON:0001638 vein 0 true
-XAO XAO:0000116 capillary equivalent_to UBERON:0001982 capillary 0 true
-XAO XAO:0000117 respiratory system equivalent_to UBERON:0001004 respiratory system 0 true
-XAO XAO:0000118 trachea equivalent_to UBERON:0003126 trachea 0 true
-XAO XAO:0000119 lung equivalent_to UBERON:0002048 lung 0 true
-XAO XAO:0000120 external gill equivalent_to UBERON:0002535 gill 0 true
-XAO XAO:0000121 bronchus equivalent_to UBERON:0002185 bronchus 0 true
-XAO XAO:0000122 hematological system equivalent_to UBERON:0002390 hematopoietic system 0 true
-XAO XAO:0000123 bone marrow equivalent_to UBERON:0002371 bone marrow 0 true
-XAO XAO:0000124 blood equivalent_to UBERON:0000178 blood 0 true
-XAO XAO:0000125 alimentary system equivalent_to UBERON:0001007 digestive system 0 true
-XAO XAO:0000126 oral cavity equivalent_to UBERON:0000167 oral cavity 0 true
-XAO XAO:0000127 esophagus equivalent_to UBERON:0001043 esophagus 0 true
-XAO XAO:0000128 stomach equivalent_to UBERON:0000945 stomach 0 true
-XAO XAO:0000129 intestine equivalent_to UBERON:0000160 intestine 0 true
-XAO XAO:0000130 small intestine equivalent_to UBERON:0002108 small intestine 0 true
-XAO XAO:0000131 large intestine equivalent_to UBERON:0000059 large intestine 0 true
-XAO XAO:0000132 liver and biliary system equivalent_to UBERON:0002423 hepatobiliary system 0 true
-XAO XAO:0000133 liver equivalent_to UBERON:0002107 liver 0 true
-XAO XAO:0000134 bile duct equivalent_to UBERON:0002394 bile duct 0 true
-XAO XAO:0000135 gall bladder equivalent_to UBERON:0002110 gallbladder 0 true
-XAO XAO:0000136 pancreas equivalent_to UBERON:0001264 pancreas 0 true
-XAO XAO:0000137 exocrine pancreas equivalent_to UBERON:0000017 exocrine pancreas 0 true
-XAO XAO:0000138 mesentery equivalent_to UBERON:0002095 mesentery 0 true
-XAO XAO:0000139 peritoneum equivalent_to UBERON:0002358 peritoneum 0 true
-XAO XAO:0000140 urogenital system equivalent_to UBERON:0004122 genitourinary system 0 true
-XAO XAO:0000141 mesonephric kidney equivalent_to UBERON:0000080 mesonephros 0 true
-XAO XAO:0000142 genital system equivalent_to UBERON:0000990 reproductive system 0 true
-XAO XAO:0000143 urinary system equivalent_to UBERON:0001008 excretory system 0 true
-XAO XAO:0000144 ureter equivalent_to UBERON:0000056 ureter 0 true
-XAO XAO:0000146 glomerulus equivalent_to UBERON:0000074 renal glomerulus 0 true
-XAO XAO:0000147 glomerus subclass UBERON:0000074 renal glomerulus 1 true
-XAO XAO:0000148 mesonephric tubule equivalent_to UBERON:0000083 mesonephric tubule 0 true
-XAO XAO:0000151 mesonephric collecting duct equivalent_to UBERON:0005319 mesonephric collecting duct 0 true
-XAO XAO:0000153 urethra equivalent_to UBERON:0000057 urethra 0 true
-XAO XAO:0000154 bladder equivalent_to UBERON:0001255 urinary bladder 0 true
-XAO XAO:0000155 male genitalia equivalent_to UBERON:0000079 male reproductive system 0 true
-XAO XAO:0000156 female genitalia equivalent_to UBERON:0000474 female reproductive system 0 true
-XAO XAO:0000157 testis equivalent_to UBERON:0000473 testis 0 true
-XAO XAO:0000158 endocrine system equivalent_to UBERON:0000949 endocrine system 0 true
-XAO XAO:0000159 Islets of Langerhans equivalent_to UBERON:0000006 islet of Langerhans 0 true
-XAO XAO:0000160 pineal gland equivalent_to UBERON:0001905 pineal body 0 true
-XAO XAO:0000162 thyroid equivalent_to UBERON:0002046 thyroid gland 0 true
-XAO XAO:0000163 thymus equivalent_to UBERON:0002370 thymus 0 true
-XAO XAO:0000164 adrenal gland equivalent_to UBERON:0002369 adrenal gland 0 true
-XAO XAO:0000165 adrenal cortex equivalent_to UBERON:0001235 adrenal cortex 0 true
-XAO XAO:0000166 adrenal medulla equivalent_to UBERON:0001236 adrenal medulla 0 true
-XAO XAO:0000167 parathyroid equivalent_to UBERON:0001132 parathyroid gland 0 true
-XAO XAO:0000168 musculoskeletal system equivalent_to UBERON:0002204 musculoskeletal system 0 true
-XAO XAO:0000169 bone equivalent_to UBERON:0001474 bone 0 true
-XAO XAO:0000170 cartilage equivalent_to UBERON:0002418 cartilage 0 true
-XAO XAO:0000171 joint equivalent_to UBERON:0000982 skeletal joint 0 true
-XAO XAO:0000172 muscle equivalent_to UBERON:0001630 muscle organ 0 true
-XAO XAO:0000173 tendon equivalent_to UBERON:0000043 tendon 0 true
-XAO XAO:0000174 skeletal muscle equivalent_to UBERON:0001134 skeletal muscle tissue 0 true
-XAO XAO:0000175 smooth muscle equivalent_to UBERON:0001135 smooth muscle tissue 0 true
-XAO XAO:0000176 dermal system equivalent_to UBERON:0002416 integumental system 0 true
-XAO XAO:0000177 nervous system equivalent_to UBERON:0001016 nervous system 0 true
-XAO XAO:0000178 peripheral nervous system equivalent_to UBERON:0000010 peripheral nervous system 0 true
-XAO XAO:0000179 eye equivalent_to UBERON:0000019 camera-type eye 0 true
-XAO XAO:0000180 cornea equivalent_to UBERON:0000964 cornea 0 true
-XAO XAO:0000181 globe part_of part_of UBERON:0000019 camera-type eye 1 true
-XAO XAO:0000182 conjunctiva equivalent_to UBERON:0001811 conjunctiva 0 true
-XAO XAO:0000183 sclera equivalent_to UBERON:0001773 sclera 0 true
-XAO XAO:0000185 iris equivalent_to UBERON:0001769 iris 0 true
-XAO XAO:0000186 ciliary body equivalent_to UBERON:0001775 ciliary body 0 true
-XAO XAO:0000187 dorsolateral placode equivalent_to UBERON:0003067 dorsolateral placode 0 true
-XAO XAO:0000188 cranial nerve II equivalent_to UBERON:0000941 cranial nerve II 0 true
-XAO XAO:0000189 auditory apparatus equivalent_to UBERON:0001690 ear 0 true
-XAO XAO:0000190 external ear equivalent_to UBERON:0001691 external ear 0 true
-XAO XAO:0000191 middle ear equivalent_to UBERON:0001756 middle ear 0 true
-XAO XAO:0000192 inner ear equivalent_to UBERON:0001846 internal ear 0 true
-XAO XAO:0000193 osseous labyrinth equivalent_to UBERON:0001839 bony labyrinth 0 true
-XAO XAO:0000194 membranous labyrinth equivalent_to UBERON:0001849 membranous labyrinth 0 true
-XAO XAO:0000195 utricle equivalent_to UBERON:0001853 utricle of membranous labyrinth 0 true
-XAO XAO:0000196 sacculus equivalent_to UBERON:0001854 saccule of membranous labyrinth 0 true
-XAO XAO:0000197 lagena equivalent_to UBERON:0001844 cochlea 0 true
-XAO XAO:0000198 semicircular canal equivalent_to UBERON:0001840 semicircular canal 0 true
-XAO XAO:0000199 vestibule equivalent_to UBERON:0005236 osseus labyrinth vestibule 0 true
-XAO XAO:0000200 animal blastomere subclass UBERON:0007006 blastomere 1 true
-XAO XAO:0000202 animal hemisphere part_of part_of CL:0000365 zygote 1 true
-XAO XAO:0000204 peripheral nerve equivalent_to UBERON:0002003 peripheral nerve 0 true
-XAO XAO:0000205 axial mesoderm equivalent_to UBERON:0003068 axial mesoderm 0 true
-XAO XAO:0000206 blastocoel anlage part_of part_of CL:0000365 zygote 1 true
-XAO XAO:0000207 blastocoel roof part_of part_of UBERON:0000090 blastocele 1 true
-XAO XAO:0000208 blastopore equivalent_to UBERON:0000100 blastopore 0 true
-XAO XAO:0000209 ganglion equivalent_to UBERON:0000045 ganglion 0 true
-XAO XAO:0000210 spinal ganglion equivalent_to UBERON:0000044 dorsal root ganglion 0 true
-XAO XAO:0000211 sympathetic chain equivalent_to UBERON:0000407 sympathetic trunk 0 true
-XAO XAO:0000212 tympanum equivalent_to UBERON:0002364 tympanic membrane 0 true
-XAO XAO:0000213 auditory tube equivalent_to UBERON:0002393 pharyngotympanic tube 0 true
-XAO XAO:0000214 auditory ossicle equivalent_to UBERON:0001686 auditory ossicle 0 true
-XAO XAO:0000215 central nervous system equivalent_to UBERON:0001017 central nervous system 0 true
-XAO XAO:0000216 cortex equivalent_to UBERON:0005889 zygote cortex 0 true
-XAO XAO:0000217 dermis equivalent_to UBERON:0002067 dermis 0 true
-XAO XAO:0000218 appendage equivalent_to UBERON:0000026 appendage 0 true
-XAO XAO:0000220 dermatome equivalent_to UBERON:0004016 dermatome 0 true
-XAO XAO:0000223 otic placode equivalent_to UBERON:0003069 otic placode 0 true
-XAO XAO:0000224 vegetal part, early involuting part_of part_of UBERON:0004879 marginal zone of embryo 2 true
-XAO XAO:0000225 trigeminal placode equivalent_to UBERON:0003070 trigeminal placode 0 true
-XAO XAO:0000226 equatorial belt part_of part_of CL:0000365 zygote 1 true
-XAO XAO:0000227 eye primordium equivalent_to UBERON:0003071 eye primordium 0 true
-XAO XAO:0000228 eye vesicle equivalent_to UBERON:0004128 optic vesicle 0 true
-XAO XAO:0000229 fasciculated network of fibrils part_of part_of CL:0000023 oocyte 1 true
-XAO XAO:0000230 follicle cell equivalent_to CL:0000477 follicle cell 0 true
-XAO XAO:0000231 follicle layer part_of part_of UBERON:0000473 testis 1 true
-XAO XAO:0000231 follicle layer part_of part_of UBERON:0000992 ovary 1 true
-XAO XAO:0000232 foregut equivalent_to UBERON:0001041 foregut 0 true
-XAO XAO:0000233 germ plasm part_of part_of CL:0000365 zygote 2 true
-XAO XAO:0000234 germinal vesicle part_of part_of CL:0000023 oocyte 1 true
-XAO XAO:0000235 cardiac mesoderm equivalent_to UBERON:0007005 cardiac mesoderm 0 true
-XAO XAO:0000236 duodenum equivalent_to UBERON:0002114 duodenum 0 true
-XAO XAO:0000237 ileum equivalent_to UBERON:0002116 ileum 0 true
-XAO XAO:0000238 rectum equivalent_to UBERON:0001052 rectum 0 true
-XAO XAO:0000239 hepato-pancreatic duct develops_from develops_from UBERON:0004912 biliary bud 1 true
-XAO XAO:0000239 hepato-pancreatic duct part_of part_of UBERON:0002423 hepatobiliary system 1 true
-XAO XAO:0000240 lens placode equivalent_to UBERON:0003073 lens placode 0 true
-XAO XAO:0000241 posterior cardinal vein equivalent_to UBERON:0002065 postcardinal vein 0 true
-XAO XAO:0000242 mesonephric duct equivalent_to UBERON:0003074 mesonephric duct 0 true
-XAO XAO:0000243 colon equivalent_to UBERON:0001155 colon 0 true
-XAO XAO:0000244 cloaca equivalent_to UBERON:0000162 cloaca 0 true
-XAO XAO:0000245 mitochondrial aggregate part_of part_of CL:0000023 oocyte 1 true
-XAO XAO:0000246 myocoelic slit part_of part_of UBERON:0003082 myotome 1 true
-XAO XAO:0000247 visceral pouch 2 equivalent_to UBERON:0007123 pharyngeal pouch 2 0 true
-XAO XAO:0000248 neural groove equivalent_to UBERON:0005061 neural groove 0 true
-XAO XAO:0000249 neural plate equivalent_to UBERON:0003075 neural plate 0 true
-XAO XAO:0000250 posterior neural tube equivalent_to UBERON:0003076 posterior neural tube 0 true
-XAO XAO:0000251 visceral pouch 3 equivalent_to UBERON:0007124 pharyngeal pouch 3 0 true
-XAO XAO:0000252 neurocoel equivalent_to UBERON:0003842 neural lumen 0 true
-XAO XAO:0000253 non-involuting marginal zone part_of part_of UBERON:0000924 ectoderm 1 true
-XAO XAO:0000253 non-involuting marginal zone subclass UBERON:0004879 marginal zone of embryo 1 true
-XAO XAO:0000254 visceral pouch 4 equivalent_to UBERON:0007125 pharyngeal pouch 4 0 true
-XAO XAO:0000255 visceral pouch 5 equivalent_to UBERON:0007126 pharyngeal pouch 5 0 true
-XAO XAO:0000256 oocyte equivalent_to CL:0000023 oocyte 0 true
-XAO XAO:0000257 oral evagination develops_from develops_from UBERON:0001041 foregut 1 true
-XAO XAO:0000257 oral evagination subclass UBERON:0002050 embryonic structure 1 true
-XAO XAO:0000258 ovary equivalent_to UBERON:0000992 ovary 0 true
-XAO XAO:0000259 paraxial mesoderm equivalent_to UBERON:0003077 paraxial mesoderm 0 true
-XAO XAO:0000260 perivitelline space part_of part_of CL:0000365 zygote 1 true
-XAO XAO:0000261 pigment layer part_of part_of UBERON:0004128 optic vesicle 1 true
-XAO XAO:0000262 polar body part_of part_of CL:0000023 oocyte 1 true
-XAO XAO:0000263 primary oogonium develops_from develops_from CL:0000670 primordial germ cell 1 true
-XAO XAO:0000263 primary oogonium part_of part_of UBERON:0000992 ovary 1 true
-XAO XAO:0000263 primary oogonium subclass CL:0000586 germ cell 1 true
-XAO XAO:0000264 pronephric mesenchyme equivalent_to UBERON:0005721 pronephric mesoderm 0 true
-XAO XAO:0000265 visceral pouch 6 equivalent_to UBERON:0007127 pharyngeal pouch 6 0 true
-XAO XAO:0000266 retinal layer equivalent_to UBERON:0001781 layer of retina 0 true
-XAO XAO:0000267 hypophyseal primordium subclass UBERON:0001048 primordium 1 true
-XAO XAO:0000268 secondary oogonium subclass CL:0000586 germ cell 1 true
-XAO XAO:0000269 mouth primordium equivalent_to UBERON:0000930 stomodeum 0 true
-XAO XAO:0000270 sensorial layer of neurectoderm part_of part_of UBERON:0002346 neural ectoderm 1 true
-XAO XAO:0000271 somatic layer of lateral plate mesoderm equivalent_to UBERON:0004871 somatic layer of lateral plate mesoderm 0 true
-XAO XAO:0000272 Jacobson's organ equivalent_to UBERON:0002255 vomeronasal organ 0 true
-XAO XAO:0000273 olfactory organ equivalent_to UBERON:0002268 olfactory organ 0 true
-XAO XAO:0000274 sperm entry point part_of part_of CL:0000365 zygote 1 true
-XAO XAO:0000275 nasal pit equivalent_to UBERON:0005870 olfactory pit 0 true
-XAO XAO:0000276 splanchnic layer of lateral plate mesoderm equivalent_to UBERON:0004872 splanchnic layer of lateral plate mesoderm 0 true
-XAO XAO:0000277 choana equivalent_to UBERON:0004771 posterior nasal aperture 0 true
-XAO XAO:0000278 animal part, late involuting part_of part_of UBERON:0004879 marginal zone of embryo 2 true
-XAO XAO:0000279 vegetal blastomere subclass UBERON:0007006 blastomere 1 true
-XAO XAO:0000280 vegetal hemisphere part_of part_of CL:0000365 zygote 1 true
-XAO XAO:0000281 vegetal yolk mass equivalent_to UBERON:0000918 yolk 0 true
-XAO XAO:0000282 visceral pouch equivalent_to UBERON:0004117 pharyngeal pouch 0 true
-XAO XAO:0000283 pupil equivalent_to UBERON:0001771 pupil 0 true
-XAO XAO:0000284 epibranchial placode equivalent_to UBERON:0003078 epibranchial placode 0 true
-XAO XAO:0000285 pronephric nephron equivalent_to UBERON:0005309 pronephric nephron 0 true
-XAO XAO:0000286 late proximal tubule part_of part_of UBERON:0005309 pronephric nephron 1 true
-XAO XAO:0000287 early distal tubule equivalent_to UBERON:0006337 distal early tubule 0 true
-XAO XAO:0000288 early proximal tubule part_of part_of UBERON:0005309 pronephric nephron 1 true
-XAO XAO:0000289 late distal segment part_of part_of UBERON:0005309 pronephric nephron 1 true
-XAO XAO:0000291 mesonephric mesenchyme equivalent_to UBERON:0005323 mesonephric mesenchyme 0 true
-XAO XAO:0000292 mesonephric nephron equivalent_to UBERON:0005322 mesonephric nephron 0 true
-XAO XAO:0000294 blastocoel equivalent_to UBERON:0000090 blastocele 0 true
-XAO XAO:0000295 central endoderm part_of part_of UBERON:0000925 endoderm 1 true
-XAO XAO:0000305 cranial placode equivalent_to UBERON:0002546 cranial placode 0 true
-XAO XAO:0000306 floor plate equivalent_to UBERON:0005723 floor plate spinal cord region 0 true
-XAO XAO:0000307 anterior neural tube equivalent_to UBERON:0003080 anterior neural tube 0 true
-XAO XAO:0000310 anterior neural fold part_of part_of UBERON:0003056 pre-chordal neural plate 1 true
-XAO XAO:0000311 lateral plate mesoderm equivalent_to UBERON:0003081 lateral plate mesoderm 0 true
-XAO XAO:0000313 head somite equivalent_to UBERON:0005594 head somite 0 true
-XAO XAO:0000314 trunk somite equivalent_to UBERON:0005598 trunk somite 0 true
-XAO XAO:0000315 myotome equivalent_to UBERON:0003082 myotome 0 true
-XAO XAO:0000316 epicardium equivalent_to UBERON:0002348 epicardium 0 true
-XAO XAO:0000318 glomus equivalent_to UBERON:0004739 pronephric glomerulus 0 true
-XAO XAO:0000319 trunk neural crest equivalent_to UBERON:0003083 trunk neural crest 0 true
-XAO XAO:0000320 sensorial layer develops_from develops_from UBERON:0000924 ectoderm 1 true
-XAO XAO:0000320 sensorial layer subclass UBERON:0002050 embryonic structure 1 true
-XAO XAO:0000323 profundus ganglion develops_from develops_from UBERON:0003070 trigeminal placode 1 true
-XAO XAO:0000323 profundus ganglion subclass UBERON:0000045 ganglion 1 true
-XAO XAO:0000324 hypobranchial placode develops_from develops_from UBERON:0003067 dorsolateral placode 1 true
-XAO XAO:0000326 left spleen primordium develops_from develops_from UBERON:0004872 splanchnic layer of lateral plate mesoderm 1 true
-XAO XAO:0000326 left spleen primordium subclass UBERON:0001048 primordium 1 true
-XAO XAO:0000327 right spleen primordium develops_from develops_from UBERON:0004872 splanchnic layer of lateral plate mesoderm 1 true
-XAO XAO:0000327 right spleen primordium subclass UBERON:0001048 primordium 1 true
-XAO XAO:0000328 spleen equivalent_to UBERON:0002106 spleen 0 true
-XAO XAO:0000329 coelomic epithelium equivalent_to UBERON:0005891 coelomic epithelium 0 true
-XAO XAO:0000330 Mullerian duct equivalent_to UBERON:0003890 Mullerian duct 0 true
-XAO XAO:0000331 mesonephric early proximal tubule develops_from develops_from UBERON:0005322 mesonephric nephron 1 true
-XAO XAO:0000331 mesonephric early proximal tubule part_of part_of UBERON:0000083 mesonephric tubule 1 true
-XAO XAO:0000332 mesonephric late proximal tubule develops_from develops_from UBERON:0005322 mesonephric nephron 1 true
-XAO XAO:0000332 mesonephric late proximal tubule part_of part_of UBERON:0000083 mesonephric tubule 1 true
-XAO XAO:0000333 mesonephric early distal tubule equivalent_to UBERON:0005892 mesonephric early distal tubule 0 true
-XAO XAO:0000334 mesonephric late distal segment develops_from develops_from UBERON:0005322 mesonephric nephron 1 true
-XAO XAO:0000334 mesonephric late distal segment part_of part_of UBERON:0000083 mesonephric tubule 1 true
-XAO XAO:0000336 fused heart primordium equivalent_to UBERON:0003084 heart primordium 0 true
-XAO XAO:0000337 endocardial tube develops_from develops_from UBERON:0002165 endocardium 1 true
-XAO XAO:0000337 endocardial tube subclass UBERON:0002050 embryonic structure 1 true
-XAO XAO:0000338 ventral aorta equivalent_to UBERON:0003085 ventral aorta 0 true
-XAO XAO:0000339 left channel of ventral aorta develops_from develops_from UBERON:0003085 ventral aorta 1 true
-XAO XAO:0000339 left channel of ventral aorta subclass UBERON:0001637 artery 1 true
-XAO XAO:0000340 right channel of ventral aorta develops_from develops_from UBERON:0003085 ventral aorta 1 true
-XAO XAO:0000340 right channel of ventral aorta subclass UBERON:0001637 artery 1 true
-XAO XAO:0000341 aortic arch equivalent_to UBERON:0004363 aortic arch 0 true
-XAO XAO:0000342 aortic arch 1 equivalent_to UBERON:0003118 aortic arch 1 0 true
-XAO XAO:0000343 aortic arch 2 equivalent_to UBERON:0003119 aortic arch 2 0 true
-XAO XAO:0000344 aortic arch 3 equivalent_to UBERON:0003120 aortic arch 3 0 true
-XAO XAO:0000345 external carotid artery equivalent_to UBERON:0001070 external carotid artery 0 true
-XAO XAO:0000349 larval aorta develops_from develops_from UBERON:0003120 aortic arch 3 1 true
-XAO XAO:0000349 larval aorta develops_from develops_from UBERON:0005805 dorsal aorta 1 true
-XAO XAO:0000349 larval aorta subclass UBERON:0001637 artery 1 true
-XAO XAO:0000352 aortic arch 5 equivalent_to UBERON:0003122 aortic arch 5 0 true
-XAO XAO:0000353 aortic arch 6 equivalent_to UBERON:0003123 aortic arch 6 0 true
-XAO XAO:0000354 posterior palatine artery develops_from develops_from UBERON:0003118 aortic arch 1 1 true
-XAO XAO:0000354 posterior palatine artery subclass UBERON:0001637 artery 1 true
-XAO XAO:0000355 aortic arch 4 equivalent_to UBERON:0003121 aortic arch 4 0 true
-XAO XAO:0000356 vascular endothelium equivalent_to UBERON:0004852 cardiovascular system endothelium 0 true
-XAO XAO:0000357 arterial endothelium equivalent_to UBERON:0001917 endothelium of artery 0 true
-XAO XAO:0000358 venous endothelium equivalent_to UBERON:0001919 endothelium of vein 0 true
-XAO XAO:0000361 arteria iliaca communis develops_from develops_from UBERON:0005805 dorsal aorta 1 true
-XAO XAO:0000361 arteria iliaca communis subclass UBERON:0001637 artery 1 true
-XAO XAO:0000362 coeliaco-mesenteric artery develops_from develops_from UBERON:0005805 dorsal aorta 1 true
-XAO XAO:0000362 coeliaco-mesenteric artery subclass UBERON:0001637 artery 1 true
-XAO XAO:0000363 occipitovertebral artery develops_from develops_from UBERON:0005805 dorsal aorta 1 true
-XAO XAO:0000363 occipitovertebral artery subclass UBERON:0001637 artery 1 true
-XAO XAO:0000364 caudal artery equivalent_to UBERON:0003086 caudal artery 0 true
-XAO XAO:0000365 arteria subclavia subclass UBERON:0001637 artery 1 true
-XAO XAO:0000366 internal carotid artery equivalent_to UBERON:0001532 internal carotid artery 0 true
-XAO XAO:0000367 cerebral artery equivalent_to UBERON:0004449 cerebral artery 0 true
-XAO XAO:0000368 opthalmic artery develops_from develops_from UBERON:0001532 internal carotid artery 1 true
-XAO XAO:0000368 opthalmic artery subclass UBERON:0001637 artery 1 true
-XAO XAO:0000369 anterior palatine artery develops_from develops_from UBERON:0001532 internal carotid artery 1 true
-XAO XAO:0000369 anterior palatine artery subclass UBERON:0001637 artery 1 true
-XAO XAO:0000370 arteria mesenterica posterior subclass UBERON:0001637 artery 1 true
-XAO XAO:0000371 anterior lymph heart develops_from develops_from UBERON:0001919 endothelium of vein 1 true
-XAO XAO:0000371 anterior lymph heart part_of part_of UBERON:0002465 lymphoid system 1 true
-XAO XAO:0000372 posterior lymph heart develops_from develops_from UBERON:0001919 endothelium of vein 1 true
-XAO XAO:0000372 posterior lymph heart part_of part_of UBERON:0002465 lymphoid system 1 true
-XAO XAO:0000373 duct of Cuvier equivalent_to UBERON:0002064 common cardinal vein 0 true
-XAO XAO:0000374 dorsal lymph space part_of part_of UBERON:0002465 lymphoid system 1 true
-XAO XAO:0000375 lymph vessel equivalent_to UBERON:0001473 lymphatic vessel 0 true
-XAO XAO:0000376 omphalomesenteric vein develops_from develops_from UBERON:0001919 endothelium of vein 1 true
-XAO XAO:0000377 capillary system of liver part_of part_of UBERON:0002107 liver 1 true
-XAO XAO:0000378 musculoabdominal vein develops_from develops_from UBERON:0001919 endothelium of vein 1 true
-XAO XAO:0000379 external jugular equivalent_to UBERON:0001101 external jugular vein 0 true
-XAO XAO:0000380 lateral postcardinal vein develops_from develops_from UBERON:0001919 endothelium of vein 1 true
-XAO XAO:0000381 mesonephric sinus equivalent_to UBERON:0006196 mesonephric sinus 0 true
-XAO XAO:0000382 internal jugular equivalent_to UBERON:0001586 internal jugular vein 0 true
-XAO XAO:0000383 anterior cardinal vein equivalent_to UBERON:0003087 anterior cardinal vein 0 true
-XAO XAO:0000384 medial cardinal vein develops_from develops_from UBERON:0004344 cardinal vein 1 true
-XAO XAO:0000385 pronephric sinus equivalent_to UBERON:0006174 pronephric sinus 0 true
-XAO XAO:0000386 interrenal vein subclass UBERON:0001638 vein 1 true
-XAO XAO:0000387 hepatic vein equivalent_to UBERON:0001143 hepatic vein 0 true
-XAO XAO:0000388 posterior vena cava equivalent_to UBERON:0001072 inferior vena cava 0 true
-XAO XAO:0000389 gastric vein equivalent_to UBERON:0004450 gastric vein 0 true
-XAO XAO:0000390 caudal vein equivalent_to UBERON:0003088 caudal vein 0 true
-XAO XAO:0000391 subinterstitial vein develops_from develops_from UBERON:0001919 endothelium of vein 1 true
-XAO XAO:0000392 portal vein equivalent_to UBERON:0002017 portal vein 0 true
-XAO XAO:0000393 tail vein equivalent_to UBERON:0003481 tail vein 0 true
-XAO XAO:0000394 pulmonary vein equivalent_to UBERON:0002016 pulmonary vein 0 true
-XAO XAO:0000395 medial abdominal vein develops_from develops_from UBERON:0001919 endothelium of vein 1 true
-XAO XAO:0000396 head somite 1 develops_from develops_from UBERON:0003059 presomitic mesoderm 1 true
-XAO XAO:0000396 head somite 1 subclass UBERON:0005594 head somite 1 true
-XAO XAO:0000397 sclerotome equivalent_to UBERON:0003089 sclerotome 0 true
-XAO XAO:0000399 tendon fibroblast develops_from develops_from UBERON:0003089 sclerotome 1 true
-XAO XAO:0000399 tendon fibroblast subclass CL:0000057 fibroblast 1 true
-XAO XAO:0000401 sclerotomal cartilage develops_from develops_from UBERON:0003089 sclerotome 1 true
-XAO XAO:0000401 sclerotomal cartilage subclass UBERON:0002050 embryonic structure 1 true
-XAO XAO:0000403 head somite 2 develops_from develops_from UBERON:0003059 presomitic mesoderm 1 true
-XAO XAO:0000403 head somite 2 subclass UBERON:0005594 head somite 1 true
-XAO XAO:0000404 head somite 3 develops_from develops_from UBERON:0003059 presomitic mesoderm 1 true
-XAO XAO:0000404 head somite 3 subclass UBERON:0005594 head somite 1 true
-XAO XAO:0000405 head somite 4 develops_from develops_from UBERON:0003059 presomitic mesoderm 1 true
-XAO XAO:0000405 head somite 4 subclass UBERON:0005594 head somite 1 true
-XAO XAO:0000406 trunk somite 1 develops_from develops_from UBERON:0003059 presomitic mesoderm 1 true
-XAO XAO:0000406 trunk somite 1 subclass UBERON:0005598 trunk somite 1 true
-XAO XAO:0000407 trunk somite 2 develops_from develops_from UBERON:0003059 presomitic mesoderm 1 true
-XAO XAO:0000407 trunk somite 2 subclass UBERON:0005598 trunk somite 1 true
-XAO XAO:0000408 trunk somite 3 develops_from develops_from UBERON:0003059 presomitic mesoderm 1 true
-XAO XAO:0000408 trunk somite 3 subclass UBERON:0005598 trunk somite 1 true
-XAO XAO:0000409 trunk somite 4 develops_from develops_from UBERON:0003059 presomitic mesoderm 1 true
-XAO XAO:0000409 trunk somite 4 subclass UBERON:0005598 trunk somite 1 true
-XAO XAO:0000410 trunk somite 5 develops_from develops_from UBERON:0003059 presomitic mesoderm 1 true
-XAO XAO:0000410 trunk somite 5 subclass UBERON:0005598 trunk somite 1 true
-XAO XAO:0000411 trunk somite 6 develops_from develops_from UBERON:0003059 presomitic mesoderm 1 true
-XAO XAO:0000411 trunk somite 6 subclass UBERON:0005598 trunk somite 1 true
-XAO XAO:0000412 trunk somite 7 develops_from develops_from UBERON:0003059 presomitic mesoderm 1 true
-XAO XAO:0000412 trunk somite 7 subclass UBERON:0005598 trunk somite 1 true
-XAO XAO:0000414 sclerotomal mesenchyme develops_from develops_from UBERON:0003089 sclerotome 1 true
-XAO XAO:0000414 sclerotomal mesenchyme subclass UBERON:0002050 embryonic structure 1 true
-XAO XAO:0000415 notochordal sheath part_of part_of UBERON:0002328 notochord 1 true
-XAO XAO:0000416 trunk somite 8 develops_from develops_from UBERON:0003059 presomitic mesoderm 1 true
-XAO XAO:0000416 trunk somite 8 subclass UBERON:0005598 trunk somite 1 true
-XAO XAO:0000417 trunk somite 9 develops_from develops_from UBERON:0003059 presomitic mesoderm 1 true
-XAO XAO:0000417 trunk somite 9 subclass UBERON:0005598 trunk somite 1 true
-XAO XAO:0000418 trunk somite 10 develops_from develops_from UBERON:0003059 presomitic mesoderm 1 true
-XAO XAO:0000418 trunk somite 10 subclass UBERON:0005598 trunk somite 1 true
-XAO XAO:0000419 trunk somite 11 develops_from develops_from UBERON:0003059 presomitic mesoderm 1 true
-XAO XAO:0000419 trunk somite 11 subclass UBERON:0005598 trunk somite 1 true
-XAO XAO:0000420 trunk somite 12 develops_from develops_from UBERON:0003059 presomitic mesoderm 1 true
-XAO XAO:0000420 trunk somite 12 subclass UBERON:0005598 trunk somite 1 true
-XAO XAO:0000421 trunk somite 13 develops_from develops_from UBERON:0003059 presomitic mesoderm 1 true
-XAO XAO:0000421 trunk somite 13 subclass UBERON:0005598 trunk somite 1 true
-XAO XAO:0000422 trunk somite 14 develops_from develops_from UBERON:0003059 presomitic mesoderm 1 true
-XAO XAO:0000422 trunk somite 14 subclass UBERON:0005598 trunk somite 1 true
-XAO XAO:0000423 trunk somite 15 develops_from develops_from UBERON:0003059 presomitic mesoderm 1 true
-XAO XAO:0000423 trunk somite 15 subclass UBERON:0005598 trunk somite 1 true
-XAO XAO:0000424 trunk somite 16 develops_from develops_from UBERON:0003059 presomitic mesoderm 1 true
-XAO XAO:0000424 trunk somite 16 subclass UBERON:0005598 trunk somite 1 true
-XAO XAO:0000425 trunk somite 17 develops_from develops_from UBERON:0003059 presomitic mesoderm 1 true
-XAO XAO:0000425 trunk somite 17 subclass UBERON:0005598 trunk somite 1 true
-XAO XAO:0000426 cranial nerve I equivalent_to UBERON:0001579 olfactory nerve 0 true
-XAO XAO:0000427 gasserian ganglion equivalent_to UBERON:0001675 trigeminal ganglion 0 true
-XAO XAO:0000428 trigeminal ganglion equivalent_to UBERON:0001675 trigeminal ganglion 0 true
-XAO XAO:0000429 cephalic nerve subclass UBERON:0001785 cranial nerve 1 true
-XAO XAO:0000430 Rathke's pouch equivalent_to UBERON:0005356 Rathke's pouch 0 true
-XAO XAO:0000431 tooth equivalent_to UBERON:0001091 calcareous tooth 0 true
-XAO XAO:0000437 death equivalent_to UBERON:0000071 death stage 0 true
-XAO XAO:0000439 coelomic filter chamber part_of part_of UBERON:0003081 lateral plate mesoderm 1 true
-XAO XAO:0000440 lateral line placode develops_from develops_from UBERON:0002546 cranial placode 1 true
-XAO XAO:0000441 infraorbital lateral line primordium subclass UBERON:0001048 primordium 1 true
-XAO XAO:0000442 supraorbital lateral line equivalent_to UBERON:0003090 supraorbital lateral line 0 true
-XAO XAO:0000443 trunk lateral line part_of part_of UBERON:0002540 lateral line system 1 true
-XAO XAO:0000444 thyroid primordium equivalent_to UBERON:0003091 thyroid primordium 0 true
-XAO XAO:0000445 taste bud equivalent_to UBERON:0001727 taste bud 0 true
-XAO XAO:0000446 tongue equivalent_to UBERON:0001723 tongue 0 true
-XAO XAO:0000447 branchial arch 1 equivalent_to UBERON:0003114 pharyngeal arch 3 0 true
-XAO XAO:0000448 gill primordium develops_from develops_from UBERON:0003114 pharyngeal arch 3 1 true
-XAO XAO:0000448 gill primordium develops_from develops_from UBERON:0003115 pharyngeal arch 4 1 true
-XAO XAO:0000448 gill primordium subclass UBERON:0001048 primordium 1 true
-XAO XAO:0000449 branchial arch 2 equivalent_to UBERON:0003115 pharyngeal arch 4 0 true
-XAO XAO:0000450 epithelial body develops_from develops_from UBERON:0003114 pharyngeal arch 3 1 true
-XAO XAO:0000450 epithelial body develops_from develops_from UBERON:0007123 pharyngeal pouch 2 1 true
-XAO XAO:0000450 epithelial body part_of part_of UBERON:0000949 endocrine system 1 true
-XAO XAO:0000451 branchial arch 3 equivalent_to UBERON:0003116 pharyngeal arch 5 0 true
-XAO XAO:0000452 ultimobranchial body equivalent_to UBERON:0003092 ultimobranchial body 0 true
-XAO XAO:0000453 branchial arch 4 equivalent_to UBERON:0003117 pharyngeal arch 6 0 true
-XAO XAO:0000454 liver parenchyme develops_from develops_from UBERON:0004912 biliary bud 1 true
-XAO XAO:0000454 liver parenchyme part_of part_of UBERON:0002107 liver 1 true
-XAO XAO:0000455 biliary tree equivalent_to UBERON:0001173 biliary tree 0 true
-XAO XAO:0000457 pyloric sphincter equivalent_to UBERON:0001202 pyloric sphincter 0 true
-XAO XAO:0000458 occipital lateral line equivalent_to UBERON:0003093 occipital lateral line 0 true
-XAO XAO:0000459 infraorbital lateral line equivalent_to UBERON:0003094 infraorbital lateral line 0 true
-XAO XAO:0000460 hyomandibular lateral line part_of part_of UBERON:0002540 lateral line system 1 true
-XAO XAO:0000461 trunk placode subclass UBERON:0002050 embryonic structure 1 true
-XAO XAO:0000462 dorsal lateral line equivalent_to UBERON:0003095 dorsal lateral line 0 true
-XAO XAO:0000463 middle lateral line equivalent_to UBERON:0003096 middle lateral line 0 true
-XAO XAO:0000464 ventral lateral line part_of part_of UBERON:0002540 lateral line system 1 true
-XAO XAO:0000465 caudal lateral line equivalent_to UBERON:0006334 posterior lateral line 0 true
-XAO XAO:0000467 dorsal pancreatic bud equivalent_to UBERON:0003923 dorsal pancreatic bud 0 true
-XAO XAO:0000469 dorsal fin equivalent_to UBERON:0003097 dorsal fin 0 true
-XAO XAO:0000470 unicellular gland subclass UBERON:0003102 surface structure 1 true
-XAO XAO:0000471 xanthophore equivalent_to CL:0000430 xanthophore 0 true
-XAO XAO:0000472 iridophore equivalent_to CL:0000431 iridophore 0 true
-XAO XAO:0000474 choroid fissure equivalent_to UBERON:0005412 optic fissure 0 true
-XAO XAO:0000475 optic stalk equivalent_to UBERON:0003098 optic stalk 0 true
-XAO XAO:0001001 cranial neural crest equivalent_to UBERON:0003099 cranial neural crest 0 true
-XAO XAO:0001002 lung primordium equivalent_to UBERON:0005597 lung primordium 0 true
-XAO XAO:0001010 circulatory system equivalent_to UBERON:0004535 cardiovascular system 0 true
-XAO XAO:0001011 blood vessel equivalent_to UBERON:0001981 blood vessel 0 true
-XAO XAO:0001012 Stirnorgan develops_from develops_from UBERON:0001905 pineal body 1 true
-XAO XAO:0001012 Stirnorgan part_of part_of UBERON:0002104 visual system 1 true
-XAO XAO:0001013 facial muscle equivalent_to UBERON:0001577 muscle of face 0 true
-XAO XAO:0001014 melanophore equivalent_to CL:0000148 melanocyte 0 true
-XAO XAO:0001015 rectal diverticulum equivalent_to UBERON:0006172 rectal diverticulum 0 true
-XAO XAO:0001016 abdominal myoblast subclass CL:0000056 myoblast 1 true
-XAO XAO:0001017 portion of connective tissue equivalent_to UBERON:0002384 connective tissue 0 true
-XAO XAO:0001018 anterior lymph sac develops_from develops_from UBERON:0001919 endothelium of vein 1 true
-XAO XAO:0001018 anterior lymph sac part_of part_of UBERON:0002465 lymphoid system 1 true
-XAO XAO:0001019 proctodeum equivalent_to UBERON:0000931 proctodeum 0 true
-XAO XAO:0001020 elastica externa develops_from develops_from UBERON:0002328 notochord 1 true
-XAO XAO:0001021 notochordal epithelium develops_from develops_from UBERON:0002328 notochord 1 true
-XAO XAO:0001021 notochordal epithelium subclass UBERON:0000483 epithelium 1 true
-XAO XAO:0001101 first pancreatic bud equivalent_to UBERON:0003921 pancreas primordium 0 true
-XAO XAO:0001102 second pancreatic bud develops_from develops_from UBERON:0001041 foregut 1 true
-XAO XAO:0001102 second pancreatic bud subclass UBERON:0001048 primordium 1 true
-XAO XAO:0001103 ventral pancreatic bud equivalent_to UBERON:0003924 ventral pancreatic bud 0 true
-XAO XAO:0002000 pronephric kidney equivalent_to UBERON:0005794 pronephric kidney 0 true
-XAO XAO:0003000 anatomical structure equivalent_to UBERON:0000061 anatomical structure 0 true
-XAO XAO:0003001 anatomical group equivalent_to UBERON:0000480 anatomical group 0 true
-XAO XAO:0003002 anatomical system equivalent_to UBERON:0000467 anatomical system 0 true
-XAO XAO:0003004 whole organism equivalent_to UBERON:0000468 multi-cellular organism 0 true
-XAO XAO:0003005 female organism equivalent_to UBERON:0003100 female organism 0 true
-XAO XAO:0003006 male organism equivalent_to UBERON:0003101 male organism 0 true
-XAO XAO:0003010 aorta equivalent_to UBERON:0000947 aorta 0 true
-XAO XAO:0003011 primary germ layer equivalent_to UBERON:0000923 germ layer 0 true
-XAO XAO:0003012 cell part_of part_of UBERON:0000468 multi-cellular organism 1 false
-XAO XAO:0003013 organism subdivision equivalent_to UBERON:0000475 organism subdivision 0 true
-XAO XAO:0003014 pigment cell equivalent_to CL:0000147 pigment cell 0 true
-XAO XAO:0003015 myoblast equivalent_to CL:0000056 myoblast 0 true
-XAO XAO:0003016 blastomere equivalent_to UBERON:0007006 blastomere 0 true
-XAO XAO:0003017 fibroblast equivalent_to CL:0000057 fibroblast 0 true
-XAO XAO:0003018 primary spermatogonium develops_from develops_from CL:0000670 primordial germ cell 1 true
-XAO XAO:0003018 primary spermatogonium part_of part_of UBERON:0000473 testis 1 true
-XAO XAO:0003018 primary spermatogonium subclass CL:0000586 germ cell 1 true
-XAO XAO:0003019 spermatocyte equivalent_to CL:0000017 spermatocyte 0 true
-XAO XAO:0003020 secondary spermatogonium subclass CL:0000586 germ cell 1 true
-XAO XAO:0003022 Rohon-Beard neuron equivalent_to CL:0000247 Rohon-Beard neuron 0 true
-XAO XAO:0003023 neuron equivalent_to CL:0000540 neuron 0 true
-XAO XAO:0003024 head equivalent_to UBERON:0000033 head 0 true
-XAO XAO:0003025 trunk equivalent_to UBERON:0002100 trunk 0 true
-XAO XAO:0003026 tail equivalent_to UBERON:0002415 tail 0 true
-XAO XAO:0003027 limb equivalent_to UBERON:0002101 limb 0 true
-XAO XAO:0003028 surface structure equivalent_to UBERON:0003102 surface structure 0 true
-XAO XAO:0003029 mouth equivalent_to UBERON:0000165 mouth 0 true
-XAO XAO:0003030 forelimb equivalent_to UBERON:0002102 forelimb 0 true
-XAO XAO:0003031 hind limb equivalent_to UBERON:0002103 hindlimb 0 true
-XAO XAO:0003032 digit equivalent_to UBERON:0002544 digit 0 true
-XAO XAO:0003033 nostril equivalent_to UBERON:0005928 external naris 0 true
-XAO XAO:0003034 viscus equivalent_to UBERON:0002075 viscus 0 true
-XAO XAO:0003035 hind digit equivalent_to UBERON:0000027 hind digit 0 true
-XAO XAO:0003036 fore digit equivalent_to UBERON:0002389 finger 0 true
-XAO XAO:0003037 multi-tissue structure equivalent_to UBERON:0000481 multi-tissue structure 0 true
-XAO XAO:0003038 simple organ equivalent_to UBERON:0000472 simple organ 0 true
-XAO XAO:0003039 compound organ component equivalent_to UBERON:0000471 compound organ component 0 true
-XAO XAO:0003040 portion of tissue equivalent_to UBERON:0000479 portion of tissue 0 true
-XAO XAO:0003041 compound organ equivalent_to UBERON:0000062 organ 0 true
-XAO XAO:0003042 embryonic structure equivalent_to UBERON:0002050 embryonic structure 0 true
-XAO XAO:0003043 primordium equivalent_to UBERON:0001048 primordium 0 true
-XAO XAO:0003044 endomesoderm equivalent_to UBERON:0000089 hypoblast 0 true
-XAO XAO:0003045 epithelium equivalent_to UBERON:0000483 epithelium 0 true
-XAO XAO:0003046 mesenchyme equivalent_to UBERON:0003104 mesenchyme 0 true
-XAO XAO:0003047 nerve equivalent_to UBERON:0001021 nerve 0 true
-XAO XAO:0003048 egg equivalent_to CL:0000025 egg 0 true
-XAO XAO:0003049 adipose tissue equivalent_to UBERON:0001013 adipose tissue 0 true
-XAO XAO:0003050 fat body equivalent_to UBERON:0003916 fat pad 0 true
-XAO XAO:0003051 dorsal lateral plate region equivalent_to UBERON:0003105 dorsal lateral plate region 0 true
-XAO XAO:0003052 oviduct equivalent_to UBERON:0000993 oviduct 0 true
-XAO XAO:0003054 stem cell equivalent_to CL:0000034 stem cell 0 true
-XAO XAO:0003055 hematopoietic stem cell equivalent_to CL:0000037 hematopoietic stem cell 0 true
-XAO XAO:0003059 chondrocranium equivalent_to UBERON:0004761 cartilaginous neurocranium 0 true
-XAO XAO:0003060 skeletal system equivalent_to UBERON:0001434 skeletal system 0 true
-XAO XAO:0003061 forelimb skeleton equivalent_to UBERON:0001440 forelimb skeleton 0 true
-XAO XAO:0003062 hind limb skeleton equivalent_to UBERON:0001441 hindlimb skeleton 0 true
-XAO XAO:0003063 pectoral girdle equivalent_to UBERON:0006850 tetratpod pectoral girdle 0 true
-XAO XAO:0003064 pelvic girdle equivalent_to UBERON:0001271 pelvic girdle 0 true
-XAO XAO:0003065 forelimb bud equivalent_to UBERON:0005417 forelimb bud 0 true
-XAO XAO:0003066 hind limb bud equivalent_to UBERON:0005418 hindlimb bud 0 true
-XAO XAO:0003073 postcranial axial skeleton equivalent_to UBERON:0002090 postcranial axial skeleton 0 true
-XAO XAO:0003074 vertebral column equivalent_to UBERON:0001130 vertebral column 0 true
-XAO XAO:0003075 cranium equivalent_to UBERON:0003128 cranium 0 true
-XAO XAO:0003076 cervical vertebra equivalent_to UBERON:0002413 cervical vertebra 0 true
-XAO XAO:0003077 presacral vertebra equivalent_to UBERON:0004451 presacral vertebra 0 true
-XAO XAO:0003078 sacral vertebra equivalent_to UBERON:0001094 sacral vertebra 0 true
-XAO XAO:0003079 caudal vertebra equivalent_to UBERON:0001095 caudal vertebra 0 true
-XAO XAO:0003080 urostyle equivalent_to UBERON:0003106 urostyle 0 true
-XAO XAO:0003081 larynx equivalent_to UBERON:0001737 larynx 0 true
-XAO XAO:0003083 braincase and otic capsule skeleton part_of part_of UBERON:0003128 cranium 1 true
-XAO XAO:0003084 lower jaw equivalent_to UBERON:0001710 lower jaw 0 true
-XAO XAO:0003085 Meckel's cartilage equivalent_to UBERON:0003107 Meckel's cartilage 0 true
-XAO XAO:0003086 suspensorium equivalent_to UBERON:0003108 suspensorium 0 true
-XAO XAO:0003087 upper jaw equivalent_to UBERON:0001709 upper jaw 0 true
-XAO XAO:0003088 seminiferous tubule equivalent_to UBERON:0001343 seminiferous tubule of testis 0 true
-XAO XAO:0003089 cranial nerve equivalent_to UBERON:0001785 cranial nerve 0 true
-XAO XAO:0003090 cranial nerve III equivalent_to UBERON:0001643 oculomotor nerve 0 true
-XAO XAO:0003091 cranial nerve IV equivalent_to UBERON:0001644 trochlear nerve 0 true
-XAO XAO:0003092 cranial nerve V equivalent_to UBERON:0001645 trigeminal nerve 0 true
-XAO XAO:0003093 cranial nerve VI equivalent_to UBERON:0001646 abducens nerve 0 true
-XAO XAO:0003094 cranial nerve VII equivalent_to UBERON:0001647 facial nerve 0 true
-XAO XAO:0003095 cranial nerve VIII equivalent_to UBERON:0001648 vestibulocochlear nerve 0 true
-XAO XAO:0003096 cranial nerve IX equivalent_to UBERON:0001649 glossopharyngeal nerve 0 true
-XAO XAO:0003097 cranial nerve X equivalent_to UBERON:0001759 vagus nerve 0 true
-XAO XAO:0003098 cerebellum equivalent_to UBERON:0002037 cerebellum 0 true
-XAO XAO:0003099 fourth ventricle equivalent_to UBERON:0002422 fourth ventricle 0 true
-XAO XAO:0003100 medulla oblongata equivalent_to UBERON:0001896 medulla oblongata 0 true
-XAO XAO:0003101 spinal nerve equivalent_to UBERON:0001780 spinal nerve 0 true
-XAO XAO:0003102 transverse process equivalent_to UBERON:0003109 parapophysis 0 true
-XAO XAO:0003103 claw equivalent_to UBERON:0001705 nail 0 true
-XAO XAO:0003104 myotome of head somite 1 subclass UBERON:0003082 myotome 1 true
-XAO XAO:0003105 myotome of head somite 2 subclass UBERON:0003082 myotome 1 true
-XAO XAO:0003106 myotome of head somite 3 subclass UBERON:0003082 myotome 1 true
-XAO XAO:0003107 myotome of head somite 4 subclass UBERON:0003082 myotome 1 true
-XAO XAO:0003108 myotome of trunk somite 1 subclass UBERON:0003082 myotome 1 true
-XAO XAO:0003109 myotome of trunk somite 2 subclass UBERON:0003082 myotome 1 true
-XAO XAO:0003110 myotome of trunk somite 3 subclass UBERON:0003082 myotome 1 true
-XAO XAO:0003111 myotome of trunk somite 4 subclass UBERON:0003082 myotome 1 true
-XAO XAO:0003112 sclerotome of head somite 4 subclass UBERON:0003089 sclerotome 1 true
-XAO XAO:0003113 sclerotome of trunk somite 1 subclass UBERON:0003089 sclerotome 1 true
-XAO XAO:0003114 sclerotome of trunk somite 2 subclass UBERON:0003089 sclerotome 1 true
-XAO XAO:0003115 sclerotome of trunk somite 3 subclass UBERON:0003089 sclerotome 1 true
-XAO XAO:0003116 sclerotome of trunk somite 4 subclass UBERON:0003089 sclerotome 1 true
-XAO XAO:0003117 myotome of trunk somite 5 subclass UBERON:0003082 myotome 1 true
-XAO XAO:0003118 myotome of trunk somite 6 subclass UBERON:0003082 myotome 1 true
-XAO XAO:0003119 myotome of trunk somite 7 subclass UBERON:0003082 myotome 1 true
-XAO XAO:0003120 myotome of trunk somite 8 subclass UBERON:0003082 myotome 1 true
-XAO XAO:0003121 sclerotome of trunk somite 5 subclass UBERON:0003089 sclerotome 1 true
-XAO XAO:0003122 sclerotome of trunk somite 6 subclass UBERON:0003089 sclerotome 1 true
-XAO XAO:0003123 sclerotome of trunk somite 7 subclass UBERON:0003089 sclerotome 1 true
-XAO XAO:0003124 sclerotome of trunk somite 8 subclass UBERON:0003089 sclerotome 1 true
-XAO XAO:0003125 myotome of trunk somite 9 subclass UBERON:0003082 myotome 1 true
-XAO XAO:0003126 sclerotome of trunk somite 9 subclass UBERON:0003089 sclerotome 1 true
-XAO XAO:0003127 sclerotome of trunk somite 10 subclass UBERON:0003089 sclerotome 1 true
-XAO XAO:0003128 myotome of trunk somite 10 subclass UBERON:0003082 myotome 1 true
-XAO XAO:0003129 sclerotome of trunk somite 11 subclass UBERON:0003089 sclerotome 1 true
-XAO XAO:0003130 myotome of trunk somite 11 subclass UBERON:0003082 myotome 1 true
-XAO XAO:0003131 sclerotome of trunk somite 12 subclass UBERON:0003089 sclerotome 1 true
-XAO XAO:0003132 myotome of trunk somite 12 subclass UBERON:0003082 myotome 1 true
-XAO XAO:0003133 sclerotome of trunk somite 13 subclass UBERON:0003089 sclerotome 1 true
-XAO XAO:0003134 myotome of trunk somite 13 subclass UBERON:0003082 myotome 1 true
-XAO XAO:0003135 sclerotome of trunk somite 14 subclass UBERON:0003089 sclerotome 1 true
-XAO XAO:0003136 myotome of trunk somite 14 subclass UBERON:0003082 myotome 1 true
-XAO XAO:0003137 sclerotome of trunk somite 15 subclass UBERON:0003089 sclerotome 1 true
-XAO XAO:0003138 myotome of trunk somite 15 subclass UBERON:0003082 myotome 1 true
-XAO XAO:0003139 sclerotome of trunk somite 16 subclass UBERON:0003089 sclerotome 1 true
-XAO XAO:0003140 myotome of trunk somite 16 subclass UBERON:0003082 myotome 1 true
-XAO XAO:0003141 sclerotome of trunk somite 17 subclass UBERON:0003089 sclerotome 1 true
-XAO XAO:0003142 myotome of trunk somite 17 subclass UBERON:0003082 myotome 1 true
-XAO XAO:0003143 tail somite part_of part_of UBERON:0002415 tail 1 true
-XAO XAO:0003143 tail somite subclass UBERON:0002329 somite 1 true
-XAO XAO:0003144 amphibian papilla part_of part_of UBERON:0001849 membranous labyrinth 1 true
-XAO XAO:0003145 basilar papilla equivalent_to UBERON:0002227 spiral organ of cochlea 0 true
-XAO XAO:0003146 gonad equivalent_to UBERON:0000991 gonad 0 true
-XAO XAO:0003147 spermatozoon equivalent_to CL:0000019 sperm 0 true
-XAO XAO:0003148 germ line cell equivalent_to CL:0000039 germ line cell 0 true
-XAO XAO:0003149 primordial germ cell equivalent_to CL:0000670 primordial germ cell 0 true
-XAO XAO:0003150 gamete equivalent_to CL:0000300 gamete 0 true
-XAO XAO:0003151 spermatid equivalent_to CL:0000018 spermatid 0 true
-XAO XAO:0003152 immune system equivalent_to UBERON:0002405 immune system 0 true
-XAO XAO:0003153 larval immune system subclass UBERON:0002405 immune system 1 true
-XAO XAO:0003154 adult immune system subclass UBERON:0002405 immune system 1 true
-XAO XAO:0003155 lymphocyte equivalent_to CL:0000542 lymphocyte 0 true
-XAO XAO:0003156 natural killer cell equivalent_to CL:0000623 natural killer cell 0 true
-XAO XAO:0003157 T cell equivalent_to CL:0000084 T cell 0 true
-XAO XAO:0003158 B cell equivalent_to CL:0000236 B cell 0 true
-XAO XAO:0003159 thymocyte part_of part_of UBERON:0002370 thymus 1 true
-XAO XAO:0003159 thymocyte subclass CL:0000542 lymphocyte 1 true
-XAO XAO:0003160 anatomical cluster equivalent_to UBERON:0000477 anatomical cluster 0 true
-XAO XAO:0003161 limb bud equivalent_to UBERON:0004347 limb bud 0 true
-XAO XAO:0003162 acellular anatomical structure equivalent_to UBERON:0000476 acellular anatomical structure 0 true
-XAO XAO:0003163 basal lamina equivalent_to UBERON:0000482 basal lamina 0 true
-XAO XAO:0003164 solid compound organ equivalent_to UBERON:0000491 solid compound organ 0 true
-XAO XAO:0003165 cavitated compound organ equivalent_to UBERON:0000489 cavitated compound organ 0 true
-XAO XAO:0003166 appendicular skeleton equivalent_to UBERON:0002091 appendicular skeleton 0 true
-XAO XAO:0003169 dermatocranium equivalent_to UBERON:0003113 dermatocranium 0 true
-XAO XAO:0003170 neurocranium equivalent_to UBERON:0001703 neurocranium 0 true
-XAO XAO:0003171 orbital region equivalent_to UBERON:0001697 orbit 0 true
-XAO XAO:0003172 olfactory region equivalent_to UBERON:0000004 olfactory apparatus 0 true
-XAO XAO:0003173 occipital region equivalent_to UBERON:0005902 occipital region 0 true
-XAO XAO:0003174 sphenoid region equivalent_to UBERON:0003111 sphenoid region 0 true
-XAO XAO:0003175 otic region equivalent_to UBERON:0003110 otic region 0 true
-XAO XAO:0003176 splanchnocranium equivalent_to UBERON:0001704 viscerocranium 0 true
-XAO XAO:0003177 hyoid arch skeleton equivalent_to UBERON:0005884 hyoid arch skeleton 0 true
-XAO XAO:0003178 dorsal hyoid arch skeleton part_of part_of UBERON:0005884 hyoid arch skeleton 1 true
-XAO XAO:0003179 ventral hyoid arch skeleton part_of part_of UBERON:0005884 hyoid arch skeleton 1 true
-XAO XAO:0003180 branchial arch skeleton equivalent_to UBERON:0005886 branchial arch skeleton 0 true
-XAO XAO:0003181 branchial arch skeleton 1 part_of part_of UBERON:0003114 pharyngeal arch 3 1 true
-XAO XAO:0003181 branchial arch skeleton 1 subclass UBERON:0005886 branchial arch skeleton 1 true
-XAO XAO:0003182 branchial arch skeleton 2 part_of part_of UBERON:0003115 pharyngeal arch 4 1 true
-XAO XAO:0003182 branchial arch skeleton 2 subclass UBERON:0005886 branchial arch skeleton 1 true
-XAO XAO:0003183 branchial arch skeleton 3 part_of part_of UBERON:0003116 pharyngeal arch 5 1 true
-XAO XAO:0003183 branchial arch skeleton 3 subclass UBERON:0005886 branchial arch skeleton 1 true
-XAO XAO:0003184 branchial arch skeleton 4 part_of part_of UBERON:0003117 pharyngeal arch 6 1 true
-XAO XAO:0003184 branchial arch skeleton 4 subclass UBERON:0005886 branchial arch skeleton 1 true
-XAO XAO:0003190 anatomical space equivalent_to UBERON:0000464 anatomical space 0 true
-XAO XAO:0003191 left atrium equivalent_to UBERON:0002079 left atrium 0 true
-XAO XAO:0003192 right atrium equivalent_to UBERON:0002078 right atrium 0 true
-XAO XAO:0003193 cardiac ventricle equivalent_to UBERON:0002082 cardiac ventricle 0 true
-XAO XAO:0003194 sensory system equivalent_to UBERON:0001032 sensory system 0 true
-XAO XAO:0003195 vestibuloauditory system equivalent_to UBERON:0002105 vestibulo-auditory system 0 true
-XAO XAO:0003196 olfactory system equivalent_to UBERON:0005725 olfactory system 0 true
-XAO XAO:0003197 gustatory system equivalent_to UBERON:0001033 gustatory system 0 true
-XAO XAO:0003198 visual system equivalent_to UBERON:0002104 visual system 0 true
-XAO XAO:0003199 lymphatic system equivalent_to UBERON:0002465 lymphoid system 0 true
-XAO XAO:0003200 gut epithelium equivalent_to UBERON:0003929 gut epithelium 0 true
-XAO XAO:0003201 oral epithelium equivalent_to UBERON:0002424 oral epithelium 0 true
-XAO XAO:0003202 pharyngeal epithelium equivalent_to UBERON:0003351 epithelium of pharynx 0 true
-XAO XAO:0003203 dental epithelium equivalent_to UBERON:0003843 tooth epithelium 0 true
-XAO XAO:0003204 neural tube equivalent_to UBERON:0001049 neural tube 0 true
-XAO XAO:0003205 chondrocyte equivalent_to CL:0000138 chondrocyte 0 true
-XAO XAO:0003206 podocyte equivalent_to CL:0000653 glomerular visceral epithelial cell 0 true
-XAO XAO:0003207 carpus equivalent_to UBERON:0004452 carpus 0 true
-XAO XAO:0003208 metacarpus equivalent_to UBERON:0004453 metacarpus 0 true
-XAO XAO:0003209 radio-ulna equivalent_to UBERON:0006715 radio-ulna 0 true
-XAO XAO:0003210 humerus equivalent_to UBERON:0000976 humerus 0 true
-XAO XAO:0003211 tarsus equivalent_to UBERON:0004454 tarsus 0 true
-XAO XAO:0003212 metatarsus equivalent_to UBERON:0000983 metatarsus 0 true
-XAO XAO:0003213 tibia-fibula equivalent_to UBERON:0006714 tibiofibula 0 true
-XAO XAO:0003214 femur equivalent_to UBERON:0000981 femur 0 true
-XAO XAO:0003215 photoreceptor layer equivalent_to UBERON:0001787 photoreceptor layer of retina 0 true
-XAO XAO:0003216 retinal neural layer equivalent_to UBERON:0003902 retinal neural layer 0 true
-XAO XAO:0003217 retinal pigmented epithelium equivalent_to UBERON:0001782 pigmented layer of retina 0 true
-XAO XAO:0003218 retinal outer plexiform layer equivalent_to UBERON:0001790 outer plexiform layer of retina 0 true
-XAO XAO:0003219 retinal outer nuclear layer equivalent_to UBERON:0001789 outer nuclear layer of retina 0 true
-XAO XAO:0003220 optic fiber layer equivalent_to UBERON:0005888 optic fiber layer 0 true
-XAO XAO:0003221 retinal inner nuclear layer equivalent_to UBERON:0001791 inner nuclear layer of retina 0 true
-XAO XAO:0003222 inner limiting membrane equivalent_to UBERON:0001794 inner limiting layer of retina 0 true
-XAO XAO:0003223 retinal ganglion cell layer equivalent_to UBERON:0001792 ganglionic layer of retina 0 true
-XAO XAO:0003224 outer limiting membrane equivalent_to UBERON:0001788 outer limiting layer of retina 0 true
-XAO XAO:0003225 retinal inner plexiform layer equivalent_to UBERON:0001795 inner plexiform layer of retina 0 true
-XAO XAO:0003226 optic tectum equivalent_to UBERON:0001945 superior colliculus 0 true
-XAO XAO:0003227 pharynx equivalent_to UBERON:0001042 vertebrate pharynx 0 true
-XAO XAO:0003228 hypaxial muscle equivalent_to UBERON:0003895 hypaxial myotome region 0 true
-XAO XAO:0003229 epaxial muscle equivalent_to UBERON:0003900 epaxial muscle 0 true
-XAO XAO:0003230 trunk musculature equivalent_to UBERON:0001774 muscle of trunk 0 true
-XAO XAO:0003231 absorptive cell equivalent_to CL:0000212 absorptive cell 0 true
-XAO XAO:0003232 acid secreting cell equivalent_to CL:0000161 acid secreting cell 0 true
-XAO XAO:0003233 acinar cell equivalent_to CL:0000622 acinar cell 0 true
-XAO XAO:0003234 alkali secreting cell equivalent_to CL:0000435 alkali secreting cell 0 true
-XAO XAO:0003235 barrier cell equivalent_to CL:0000215 barrier cell 0 true
-XAO XAO:0003236 barrier epithelial cell equivalent_to CL:0000073 barrier epithelial cell 0 true
-XAO XAO:0003237 cementoblast equivalent_to CL:0000061 cementoblast 0 true
-XAO XAO:0003238 chondroblast equivalent_to CL:0000058 chondroblast 0 true
-XAO XAO:0003239 circulating cell equivalent_to CL:0000080 circulating cell 0 true
-XAO XAO:0003240 digestive enzyme secreting cell equivalent_to CL:0000470 digestive enzyme secreting cell 0 true
-XAO XAO:0003241 early embryonic cell equivalent_to CL:0000007 early embryonic cell 0 true
-XAO XAO:0003242 morula cell equivalent_to CL:0000360 morula cell 0 true
-XAO XAO:0003243 blastoderm cell equivalent_to CL:0000353 blastoderm cell 0 true
-XAO XAO:0003244 gastrula cell equivalent_to CL:0000361 gastrula cell 0 true
-XAO XAO:0003245 ectodermal cell equivalent_to CL:0000221 ectodermal cell 0 true
-XAO XAO:0003246 electrically active cell equivalent_to CL:0000211 electrically active cell 0 true
-XAO XAO:0003247 endocrine cell equivalent_to CL:0000163 endocrine cell 0 true
-XAO XAO:0003248 endodermal cell equivalent_to CL:0000223 endodermal cell 0 true
-XAO XAO:0003249 epithelial cell equivalent_to CL:0000066 epithelial cell 0 true
-XAO XAO:0003250 exocrine cell equivalent_to CL:0000152 exocrine cell 0 true
-XAO XAO:0003251 hatching gland cell equivalent_to CL:0000249 hatching gland cell 0 true
-XAO XAO:0003252 keratin accumulating cell equivalent_to CL:0000311 keratin accumulating cell 0 true
-XAO XAO:0003253 ligament cell equivalent_to CL:0000384 ligament cell 0 true
-XAO XAO:0003254 Merkel cell equivalent_to CL:0000242 Merkel cell 0 true
-XAO XAO:0003255 mesodermal cell equivalent_to CL:0000222 mesodermal cell 0 true
-XAO XAO:0003256 mucus secreting cell equivalent_to CL:0000319 mucus secreting cell 0 true
-XAO XAO:0003257 myelin accumulating cell equivalent_to CL:0000328 myelin accumulating cell 0 true
-XAO XAO:0003258 neuromast mantle cell equivalent_to CL:0000851 neuromast mantle cell 0 true
-XAO XAO:0003259 neuromast support cell equivalent_to CL:0000852 neuromast support cell 0 true
-XAO XAO:0003260 nucleate erythrocyte equivalent_to CL:0000562 nucleate erythrocyte 0 true
-XAO XAO:0003261 olfactory epithelial support cell equivalent_to CL:0000853 olfactory epithelial support cell 0 true
-XAO XAO:0003262 oxygen accumulating cell equivalent_to CL:0000329 oxygen accumulating cell 0 true
-XAO XAO:0003263 paracrine cell equivalent_to CL:0000512 paracrine cell 0 true
-XAO XAO:0003264 pericyte equivalent_to CL:0000184 0 true
-XAO XAO:0003265 somatic stem cell equivalent_to CL:0000723 somatic stem cell 0 true
-XAO XAO:0003266 liver primordium equivalent_to UBERON:0003894 liver primordium 0 true
-XAO XAO:0003267 kidney equivalent_to UBERON:0002113 kidney 0 true
-XAO XAO:0003268 cardiac progenitor cell part_of part_of UBERON:0000468 multi-cellular organism 2 false
-XAO XAO:0003269 jaw muscle subclass UBERON:0001630 muscle organ 1 true
-XAO XAO:1000000 Xenopus developmental stage equivalent_to UBERON:0000105 life cycle stage 0 true
-XAO XAO:1000001 NF stage 1 equivalent_to UBERON:0000106 zygote stage 0 true
-XAO XAO:1000002 early tailbud subclass UBERON:0002533 tail bud 1 true
-XAO XAO:1000003 blastula equivalent_to UBERON:0000108 blastula stage 0 true
-XAO XAO:1000004 cleavage equivalent_to UBERON:0000107 cleavage stage 0 true
-XAO XAO:1000005 gastrula equivalent_to UBERON:0000109 gastrula stage 0 true
-XAO XAO:1000006 neurula equivalent_to UBERON:0000110 neurula stage 0 true
-XAO XAO:1000007 tailbud stage equivalent_to UBERON:0002533 tail bud 0 true
-XAO XAO:1000008 tadpole equivalent_to UBERON:0002547 tadpole 0 true
-XAO XAO:1000009 adult equivalent_to UBERON:0000113 post-juvenile adult stage 0 true
-XAO XAO:1000010 juvenile equivalent_to UBERON:0000112 juvenile stage 0 true
-XAO XAO:1000011 NF stage 2 (2-cell) equivalent_to UBERON:0007232 2 cell stage 0 true
-XAO XAO:1000012 embryonic stage equivalent_to UBERON:0000922 embryo 0 true
-XAO XAO:1000013 NF stage 3 (4-cell) equivalent_to UBERON:0007233 4 cell stage 0 true
-XAO XAO:1000014 NF stage 4 (8-cell) equivalent_to UBERON:0007236 8 cell stage 0 true
-XAO XAO:1000015 NF stage 5 (16-cell) part_of part_of UBERON:0000107 cleavage stage 1 true
-XAO XAO:1000016 NF stage 6 (32-cell) part_of part_of UBERON:0000107 cleavage stage 1 true
-XAO XAO:1000017 NF stage 7 part_of part_of UBERON:0000108 blastula stage 1 true
-XAO XAO:1000018 NF stage 8 part_of part_of UBERON:0000108 blastula stage 1 true
-XAO XAO:1000019 NF stage 9 part_of part_of UBERON:0000108 blastula stage 1 true
-XAO XAO:1000020 NF stage 10 part_of part_of UBERON:0000109 gastrula stage 1 true
-XAO XAO:1000021 NF stage 11 part_of part_of UBERON:0000109 gastrula stage 1 true
-XAO XAO:1000022 NF stage 12 part_of part_of UBERON:0000109 gastrula stage 1 true
-XAO XAO:1000023 NF stage 13 part_of part_of UBERON:0000110 neurula stage 1 true
-XAO XAO:1000024 NF stage 14 part_of part_of UBERON:0000110 neurula stage 1 true
-XAO XAO:1000025 NF stage 15 part_of part_of UBERON:0000110 neurula stage 1 true
-XAO XAO:1000026 NF stage 16 part_of part_of UBERON:0000110 neurula stage 1 true
-XAO XAO:1000027 NF stage 17 part_of part_of UBERON:0000110 neurula stage 1 true
-XAO XAO:1000028 NF stage 2- part_of part_of UBERON:0000107 cleavage stage 1 true
-XAO XAO:1000029 NF stage 6.5 equivalent_to UBERON:0000085 morula 0 true
-XAO XAO:1000030 NF stage 10.25 part_of part_of UBERON:0000109 gastrula stage 1 true
-XAO XAO:1000031 NF stage 10.5 part_of part_of UBERON:0000109 gastrula stage 1 true
-XAO XAO:1000032 NF stage 11.5 part_of part_of UBERON:0000109 gastrula stage 1 true
-XAO XAO:1000033 NF stage 12.5 part_of part_of UBERON:0000109 gastrula stage 1 true
-XAO XAO:1000034 NF stage 18 part_of part_of UBERON:0000110 neurula stage 1 true
-XAO XAO:1000035 NF stage 19 part_of part_of UBERON:0000110 neurula stage 1 true
-XAO XAO:1000036 NF stage 20 part_of part_of UBERON:0000110 neurula stage 1 true
-XAO XAO:1000037 NF stage 21 part_of part_of UBERON:0000110 neurula stage 1 true
-XAO XAO:1000038 NF stage 22 part_of part_of UBERON:0002533 tail bud 2 true
-XAO XAO:1000039 NF stage 23 part_of part_of UBERON:0002533 tail bud 2 true
-XAO XAO:1000040 NF stage 24 part_of part_of UBERON:0002533 tail bud 2 true
-XAO XAO:1000041 NF stage 25 part_of part_of UBERON:0002533 tail bud 2 true
-XAO XAO:1000042 NF stage 26 part_of part_of UBERON:0002533 tail bud 2 true
-XAO XAO:1000043 NF stage 27 part_of part_of UBERON:0002533 tail bud 2 true
-XAO XAO:1000044 NF stage 28 part_of part_of UBERON:0002533 tail bud 2 true
-XAO XAO:1000045 NF stage 29 and 30 part_of part_of UBERON:0002533 tail bud 2 true
-XAO XAO:1000046 NF stage 31 part_of part_of UBERON:0002533 tail bud 2 true
-XAO XAO:1000047 NF stage 32 part_of part_of UBERON:0002533 tail bud 2 true
-XAO XAO:1000048 NF stage 33 and 34 part_of part_of UBERON:0002533 tail bud 2 true
-XAO XAO:1000049 NF stage 35 and 36 part_of part_of UBERON:0002533 tail bud 2 true
-XAO XAO:1000050 NF stage 37 and 38 part_of part_of UBERON:0002533 tail bud 2 true
-XAO XAO:1000051 NF stage 39 part_of part_of UBERON:0002533 tail bud 2 true
-XAO XAO:1000052 NF stage 40 part_of part_of UBERON:0002533 tail bud 2 true
-XAO XAO:1000053 NF stage 41 part_of part_of UBERON:0002533 tail bud 2 true
-XAO XAO:1000054 NF stage 42 part_of part_of UBERON:0002533 tail bud 2 true
-XAO XAO:1000055 NF stage 43 part_of part_of UBERON:0002533 tail bud 2 true
-XAO XAO:1000056 NF stage 44 part_of part_of UBERON:0002533 tail bud 2 true
-XAO XAO:1000057 NF stage 45 part_of part_of UBERON:0002547 tadpole 2 true
-XAO XAO:1000058 NF stage 46 part_of part_of UBERON:0002547 tadpole 2 true
-XAO XAO:1000059 NF stage 47 part_of part_of UBERON:0002547 tadpole 2 true
-XAO XAO:1000060 NF stage 48 part_of part_of UBERON:0002547 tadpole 2 true
-XAO XAO:1000061 NF stage 49 part_of part_of UBERON:0002547 tadpole 2 true
-XAO XAO:1000062 NF stage 50 part_of part_of UBERON:0002547 tadpole 2 true
-XAO XAO:1000063 NF stage 51 part_of part_of UBERON:0002547 tadpole 2 true
-XAO XAO:1000064 NF stage 52 part_of part_of UBERON:0002547 tadpole 2 true
-XAO XAO:1000065 NF stage 53 part_of part_of UBERON:0002547 tadpole 2 true
-XAO XAO:1000066 NF stage 54 part_of part_of UBERON:0002547 tadpole 2 true
-XAO XAO:1000067 NF stage 55 part_of part_of UBERON:0002547 tadpole 3 true
-XAO XAO:1000068 NF stage 56 part_of part_of UBERON:0002547 tadpole 3 true
-XAO XAO:1000069 NF stage 57 part_of part_of UBERON:0002547 tadpole 3 true
-XAO XAO:1000070 NF stage 58 part_of part_of UBERON:0002547 tadpole 3 true
-XAO XAO:1000071 NF stage 59 part_of part_of UBERON:0002547 tadpole 3 true
-XAO XAO:1000072 NF stage 60 part_of part_of UBERON:0002547 tadpole 3 true
-XAO XAO:1000073 NF stage 61 part_of part_of UBERON:0002547 tadpole 3 true
-XAO XAO:1000074 NF stage 62 part_of part_of UBERON:0002547 tadpole 3 true
-XAO XAO:1000075 NF stage 63 part_of part_of UBERON:0002547 tadpole 3 true
-XAO XAO:1000076 NF stage 64 part_of part_of UBERON:0002547 tadpole 3 true
-XAO XAO:1000077 NF stage 65 part_of part_of UBERON:0002547 tadpole 3 true
-XAO XAO:1000078 NF stage 66 part_of part_of UBERON:0002547 tadpole 3 true
-XAO XAO:1000079 metamorphosing tadpole part_of part_of UBERON:0002547 tadpole 1 true
-XAO XAO:1000080 late tailbud subclass UBERON:0002533 tail bud 1 true
-XAO XAO:1000081 unspecified stage subclass UBERON:0000105 life cycle stage 1 true
-XAO XAO:1000082 unfertilized egg subclass UBERON:0000105 life cycle stage 1 true
-XAO XAO:1000089 premetamorphosis part_of part_of UBERON:0002547 tadpole 1 true
-XAO XAO:1000090 prometamorphosis part_of part_of UBERON:0002547 tadpole 2 true
-XAO XAO:1000091 climax part_of part_of UBERON:0002547 tadpole 2 true
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- <title>Ontology Comparison Report: VAO and Uberon (definitions only)</title>
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- <div id="main">
-<h1>VAO-Uberon file definition differences</h1>
-<p>Files used: latest as of 2011-31-01</p>
-<div class="block">
-<h2>Terms with changed definitions</h2>
-
-<div class="zero">
-<h3><a href="http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=VAO:0000001">VAO:0000001 : surface structure</a></h3>
-<p class="clearR"><b>VAO</b>: <span class="file">Organism subdivision <del>which </del>is the collection of anatomical structures on the body <del>surface.</del></span>
-<br><b>UBR</b>: <span class="file">Organism subdivision <ins>that </ins>is the collection of anatomical structures on the body <ins>surface[ZFA].</ins></span></p>
-<p>
- <i>
-<b>CJM-NOTES:</b>Use VAO
- </i>
-</p>
-</div>
-
-<div class="zero">
-<h3><a href="http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=VAO:0000017">VAO:0000017 : connective tissue</a></h3>
-<p>(was portion of connective tissue)</p>
-<p class="clearR"><b>VAO</b>: <span class="file">Tissue <del>with cells that deposit non-polarized extracellular </del>matrix <del>including connective </del>tissue <del>fibres </del>and <del>ground substance.</del></span>
-<br><b>UBR</b>: <span class="file">Tissue <ins>which consists of fibroblasts, osteocytes or chondrocytes and intercellular </ins>matrix <ins>produced by these cells. Examples: bone (tissue), dense regular elastic tissue, areolar tissue, neuroglia, adipose tissue. // Anatomical entity consisting of </ins>tissue <ins>that is rich in extracellular matrix (collagen, proteoglycan, etc.) </ins>and <ins>binds together and is the support of the various structures of the body.</ins></span></p>
-
-<p>
- <i>
-<b>CJM-NOTES:</b>
-Note that uberon uses terms like "tissue", whereas VAO uses the CARO/FMA-esque "portion of tissue". I would like to retain the simpler form as primary label in Uberon. "portion of connective tissue" is there as a synonym (with synonym provenance to FMA).
- </i>
-</p>
-
-<p>
- <i>
-<b>CJM-NOTES:</b>
- Use VAO def but retain some of Uberon def as part of definiton gloss.
- </i>
-</p>
-
-</div>
-
-<div class="zero">
-<h3><a href="http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=VAO:0000025">VAO:0000025 : dental papilla</a></h3>
-<p>(was odontogenic papilla)</p>
-<p class="clearR"><b>VAO</b>: <span class="file"><del>Cell condensation that </del>is a <del>well-defined population </del>of <del>densely organized mesenchymal </del>cells <del>that aggregates adjacent </del>to <del>an epithelium.</del></span>
-<br><b>UBR</b>: <span class="file"><ins>Tissue of the developing tooth. It </ins>is <ins>composed of pre-odontoblast and undiffentiated mesnchyme cells and connects to the basal lamina[ZFA]. The dental papilla is </ins>a <ins>condensation </ins>of <ins>ectomesenchymal </ins>cells <ins>called odontoblasts, seen in histologic sections of a developing tooth. It lies below a cellular aggregation known as the enamel organ. The dental papilla appears after 8-10 weeks intra uteral life. The dental papilla gives rise </ins>to <ins>the dentin and pulp of a tooth. The enamel organ, dental papilla, and dental follicle together forms one unit, called the tooth germ. This is of importance because all the tissues of a tooth and its supporting structures form from these distinct cellular aggregations.</ins></span></p>
-<p>
- <i>
-<b>CJM-NOTES:</b> VAO uses "odontogenic papilla" instead of "dental papilla". This is a better name to use in a pan-vertebrate context, although there is a case for splitting the class (e.g. dental papilla is an odontogenetic papilla that is part of a developing tooth)
- </i>
-</p>
-</div>
-
-<div class="zero">
-<h3><a href="http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=VAO:0000027">VAO:0000027 : skeletal system</a></h3>
-<p class="clearR"><b>VAO</b>: <span class="file"><del>Multi-element, multi-tissue anatomical cluster.</del></span>
-<br><b>UBR</b>: <span class="file"><ins>Organ system subdivision which consists of the skeleton and the articular system.</ins></span></p>
-<p>
- <i>
-<b>CJM-NOTES: </b>
-Here we start getting into some crucial differences. Uberon has separate classes for "skeleton" and "skeletal system", the former is part of the latter, with classes such as "axial skeleton" part of the skeleton. The skeletal system is divided into the skeleton and articular system (following FMA). Uberon also goes up to "musculoskeletal system", which is skeletal system + muscular system
-
- Uberon has the following path for terms such as PC axial skeleton:
-<pre>
-- UBERON:0002204 ! musculoskeletal system
--- UBERON:0001434 ! skeletal system ***
---- UBERON:0004288 ! skeleton ***
----- UBERON:0005944 ! axial skeleton ***
------ UBERON:0002090 ! postcranial axial skeleton ***
-</pre>
- This is similar to the FMA.
- </i>