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Commits on Apr 17, 2017
  1. new release

    cmungall committed Apr 17, 2017
Commits on Apr 14, 2017
Commits on Apr 11, 2017
  1. obsoleting cell part, fixes #1314

    cmungall committed Apr 11, 2017
Commits on Apr 3, 2017
  1. various changes to representation of developing tooth, summarized in #…

    …1313
    
    also: added EMAPA xref for chordaa tendinae
    cmungall committed Apr 3, 2017
Commits on Mar 30, 2017
Commits on Feb 17, 2017
Commits on Feb 9, 2017
  1. new release

    cmungall committed Feb 9, 2017
Commits on Feb 4, 2017
  1. obs emb stage, see #1305

    cmungall committed Feb 4, 2017
Commits on Feb 2, 2017
  1. Bone marrow / hematopoietic tissue fixes, see #651

    previous bone marrow was classified as HT, now it has it as part
    (other part being stromal)
    cmungall committed Feb 2, 2017
  2. Yolk sac partition fixes. Merged mesoderm and mesenchyme. Prevented i…

    …nference that YS = YSE, see #1305
    cmungall committed Feb 2, 2017
  3. removed redundant syns

    cmungall committed Feb 2, 2017
Commits on Jan 30, 2017
Commits on Jan 27, 2017
Commits on Jan 20, 2017
  1. import reflexivity

    cmungall committed Jan 20, 2017
Commits on Jan 17, 2017
  1. refactoring pipeline

    cmungall committed Jan 17, 2017
Commits on Dec 14, 2016
Commits on Dec 9, 2016
Commits on Nov 28, 2016
  1. nr

    cmungall committed Nov 28, 2016
Commits on Nov 24, 2016
  1. new release

    cmungall committed Nov 24, 2016
Commits on Nov 15, 2016
  1. paraurethral fixes, see #1292

    cmungall committed Nov 15, 2016
Commits on Nov 11, 2016
  1. Various fixes for #1277

    > Brodmann (1909) area 33 UBERON:0006476
    >
    > Missing restriction: Part of restriction with a range of cingulate cortex
    
    Fixed, thanks.
    
    > distal tarsal bone pre-cartilage condensation UBERON:0015101
    >
    > There appear to be missing subclasses. I'm surprised there are no associated descendants such as distal tarsal bone 4 pre-cartilage condensation (this can also be stated as the missing subclasses are missing this class as a superclass).
    
    Thank you. This can be traced back to UBERON:0015111 'distal tarsal bone 4 endochondral element', which was lacking specific parentage to UBERON:0015099 ! distal tarsal endochondral element. This has been fixed. The reasoner will now give the correct inferences for all members of this design pattern.
    
    > femur endochondral element UBERON:0015052
    >
    > Incorrect superclass: Limb endochoindral element is theoretically a redundant superclass and should be the superclass of hindlimb endochondral element, but it is not.
    
    The redundancy was caused by a incorrect logical definition of 'hindlimb endochondral element', this has been fixed.
    
    > hypothenar muscle UBERON:0014377
    >
    > The three individual muscles involved are not in Uberon and not children of this concept. (Only) Extensor digiti minimi exists.
    
    Thank you. These have been added, as well as  palmaris brevis, which FMA considers hypothenar
    
    > lamina VII of gray matter of spinal cord UBERON:0016578
    >
    > Missing part of restriction with range ventral horn of spinal cord. See UBERON:0016579 for similarity.
    
    Fixed, thank you.
    
    > lamina VIII of gray matter of spinal cord UBERON:0016579
    >
    > Missing part of restriction with range ventral commissural nucleus of spinal cord.
    
    Fixed, thank you.
    
    > muscularis mucosa UBERON:0006676
    >
    > Incorrect restrictions: remove part_of digestive tract and part_of mucosa and replace with part_of gastrointestinal system mucosa
    
    Replaced mucosa with GI system mucosa.
    
    There is still work to do here. Formally, DT is more specific than GI system. However, I don't believe MM lines as part of the GI system that is not part of the DT?
    
    There is also the issue of this class:
    
     [UBERON:0006912](http://purl.obolibrary.org/obo/UBERON_0006912) ! urinary bladder muscularis mucosa
    cmungall committed Nov 11, 2016
Commits on Oct 31, 2016