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uber-anatomy ontology
Web Ontology Language Emacs Lisp HTML Makefile Prolog Perl
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attic reorganizing files
bridge This release incorporates a first pass at organism subdivisions for
diffs This release incorporates a first pass at organism subdivisions for
docs First pass at new model for trigeminal placode complex parts and deri…
examples Tutorial for issue #341
experimental added various muscle synonyms
ext-mappings docs
issues first pass at autogenerated
js rebuilt composite-metazoan, without fbbt domain.range constraints and…
mappings reorganizing files
md releases/2014-01-11
reference new
reports stale
resources docs
scratch ensured transformation_of holds between all CT and mesenchymes. Note …
source-ontologies This release incorporates a first pass at organism subdivisions for
sparql reports for nifstd
subsets This release incorporates a first pass at organism subdivisions for
uberon.wiki @ 1ac8494 releases/2013-10-09
util This release incorporates a first pass at organism subdivisions for
.gitmodules Reorganizing doc system.
Makefile test no remove dangling; ensure latest owltools. Issue #726
README-editors.txt new-release
README.md Update README.md
add-to-uberon.pl Merged primordial meninx with future meninx. Addresses #253
basic-catalog.xml new
basic.obo This release incorporates a first pass at organism subdivisions for
catalog-v001.xml new-release
chebi_import.owl This release incorporates a first pass at organism subdivisions for
cl_import.owl This release incorporates a first pass at organism subdivisions for
composite-aba.obo This release sees the integration of the following ontologies (in add…
composite-metazoan-dev-parents.tsv * various NTs to support logical definitions
composite-metazoan-function-parents.tsv * various NTs to support logical definitions
composite-metazoan-part-parents.tsv * various NTs to support logical definitions
composite-metazoan-stage-parents.tsv * various NTs to support logical definitions
composite-metazoan-tax-parents.tsv * various NTs to support logical definitions
deleted_axioms.obo Removed dodgy syns: epencephalon-X
emapaa-remainder.obo new
emapaa.obo new
envo_import.owl releases/2013-11-05
ext-dev-parents.tsv * various NTs to support logical definitions
ext-function-parents.tsv * various NTs to support logical definitions
ext-part-parents.tsv * various NTs to support logical definitions
ext-stage-parents.tsv * various NTs to support logical definitions
ext-tax-parents.tsv * various NTs to support logical definitions
external-disjoints.obo 2015-03-15
go_import.owl This release incorporates a first pass at organism subdivisions for
homology-relations.owl additional EMAPA mappings. Issue #663
homology.owl regenerated without NOTs
ihog.obo xao-somite
make-bridge-ontologies-from-xrefs.pl * various NTs to support logical definitions
makespec.pro This release incorporates a first pass at organism subdivisions for
nbo_import.owl releases/2013-11-05
ncbitaxon_import.owl This release incorporates a first pass at organism subdivisions for
pato_import.owl This release incorporates a first pass at organism subdivisions for
pending-disjoints-core.obo Slight reorganizing of disjointness axioms.
pending-disjoints.obo This release incorporates a first pass at organism subdivisions for
pr_import.owl This release incorporates a first pass at organism subdivisions for
project.owl documenting axiom annotations
purls.conf new
release-pipeline.graffle Major changes:
ro_import.owl new-release
rules.owl new
test.md test
uberon-dev-parents.tsv * various NTs to support logical definitions
uberon-function-parents.tsv * various NTs to support logical definitions
uberon-idranges.owl trish
uberon-part-parents.tsv * various NTs to support logical definitions
uberon-simple-rel.obo new
uberon-stage-parents.tsv * various NTs to support logical definitions
uberon-tax-parents.tsv * various NTs to support logical definitions
uberon-taxmod-amniote.obo This release incorporates a first pass at organism subdivisions for
uberon-with-isa.obo This release incorporates a first pass at organism subdivisions for
uberon.obo This release incorporates a first pass at organism subdivisions for
uberon.references text def fixes using VSAO
uberon_edit-relations.tsv * various NTs to support logical definitions
uberon_edit.obo wing TCs. Issue #721
void.ttl This release incorporates new terms and improvements to feeding muscl…

README.md

Uberon is a multi-species anatomy ontology.

This repository contains the ontology source, and is primarily of relevance to Uberon editors/developers.

For an overview of the ontology, plus usage instructions on how to download the compiled versions of the ontology, please visit uberon.org.

Content

This repository contains the editors version of the ontology (uberon_edit.obo), and the material required to make a release.

Editors:

See the file README-editors.txt

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