R utilities for omic analyses
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.gitignore
LICENSE
README.md
get_GMT_from_BioPax.R
gs.pval.R
gs.wrapper.R
gs.wrapper.annotation.columns.csv
lm.pval.R

README.md

R-utils

Created by Julja Burchard and Jessica Minnier

2015/2016

R utilities for omic analyses

This is a mutt collection of R functions useful for analysis of 'omic data.

Files and functions:

  • get_GMT_from_BioPax.R
    • GMT_from_BioPax()
    • GMT_from_GOowl()
  • gs.pval.R
    • gs.pval()
  • gs.wrapper.R
    • # usage example for gs.pval.R
  • gs.wrapper.annotation.columns.csv
    • # column descriptions for output file of gs.wrapper
  • lm.pval.R
    • lm.pval()