R-utils

Created by Julja Burchard and Jessica Minnier

2015/2016

R utilities for omic analyses

This is a mutt collection of R functions useful for analysis of 'omic data.

Files and functions:

• get_GMT_from_BioPax.R
  • GMT_from_BioPax()
  • GMT_from_GOowl()
• gs.pval.R
  • gs.pval()
• gs.wrapper.R

  • usage example for gs.pval.R

• gs.wrapper.annotation.columns.csv

  • column descriptions for output file of gs.wrapper

• lm.pval.R
  • lm.pval()