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@YeoLab @czbiohub

Pinned repositories

  1. YeoLab/outrigger

    Create a *de novo* alternative splicing database, validate splicing events, and quantify percent spliced-in (Psi) from RNA seq data

    Python 32 18

  2. kvector

    kvector is a small utility for converting motifs to kmer vectors to compare motifs of different lengths

    Jupyter Notebook 6 3

  3. poshsplice

    PoshSplice is a collection of scripts and functions used to annotate splicing events, exons, and their functional consequences

    Python 2 1

  4. mwaskom/seaborn

    Statistical data visualization using matplotlib

    Python 5.5k 866

  5. prettyplotlib

    Painlessly create beautiful matplotlib plots.

    Python 1.4k 133

  6. YeoLab/flotilla

    Reproducible machine learning analysis of gene expression and alternative splicing data

    Jupyter Notebook 103 24

3,428 contributions in the last year

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November 2018

Created a pull request in czbiohub/reflow-workflows that received 2 comments

Olgabot/rename gencode ids to symbol

Addresses: #20

+5,265 −0 • 2 comments

Created an issue in grailbio/reflow that received 2 comments

`trace` not showing outputs

Hello, I'm trying to debug a bwa index run which as many bioinformatics tools, creates a file in the same directory as the input, and is tricky to …

2 comments
1 contribution in private repositories Nov 14

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