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@YeoLab @czbiohub

Pinned repositories

  1. YeoLab/outrigger

    Create a *de novo* alternative splicing database, validate splicing events, and quantify percent spliced-in (Psi) from RNA seq data

    Python 16 13

  2. kvector

    kvector is a small utility for converting motifs to kmer vectors to compare motifs of different lengths

    Jupyter Notebook 6 2

  3. poshsplice

    PoshSplice is a collection of scripts and functions used to annotate splicing events, exons, and their functional consequences

    Python 2 1

  4. mwaskom/seaborn

    Statistical data visualization using matplotlib

    Python 4.3k 636

  5. prettyplotlib

    Painlessly create beautiful matplotlib plots.

    Python 1.3k 120

  6. YeoLab/flotilla

    Reproducible machine learning analysis of gene expression and alternative splicing data

    Jupyter Notebook 86 22

1,593 contributions in the last year

Oct Nov Dec Jan Feb Mar Apr May Jun Jul Aug Sep Oct Mon Wed Fri

Contribution activity First pull request First issue First repository Joined GitHub

October 2017

Created a pull request in velocyto-team/velocyto.py that received 2 comments

Remove "man" from statement in setup.py

While I don't like Windows either, I'd imagine you want for your program to be widely adopted by more than just men.

Created an issue in pydata/xarray that received 3 comments

Unicode strings unexpectedly transformed to byte strings upon `open_dataset`

When I first create the dataset, all the metadata is stored as unicode strings (yay!): <xarray.Dataset> Dimensions: (cell: 53760, gene: 23438) Coor…

24 contributions in private repositories Oct 1 – Oct 17

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