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Organizations

@YeoLab @czbiohub

Pinned repositories

  1. YeoLab/outrigger

    Create a *de novo* alternative splicing database, validate splicing events, and quantify percent spliced-in (Psi) from RNA seq data

    Python 32 18

  2. kvector

    kvector is a small utility for converting motifs to kmer vectors to compare motifs of different lengths

    Jupyter Notebook 6 3

  3. poshsplice

    PoshSplice is a collection of scripts and functions used to annotate splicing events, exons, and their functional consequences

    Python 2 1

  4. mwaskom/seaborn

    Statistical data visualization using matplotlib

    Python 5.5k 866

  5. prettyplotlib

    Painlessly create beautiful matplotlib plots.

    Python 1.4k 133

  6. YeoLab/flotilla

    Reproducible machine learning analysis of gene expression and alternative splicing data

    Jupyter Notebook 103 24

3,428 contributions in the last year

Nov Dec Jan Feb Mar Apr May Jun Jul Aug Sep Oct Nov Mon Wed Fri

Contribution activity

November 2018

Created a pull request in czbiohub/reflow-workflows that received 2 comments

Olgabot/rename gencode ids to symbol

Addresses: #20

+5,265 −0 2 comments

Created an issue in grailbio/reflow that received 2 comments

`trace` not showing outputs

Hello, I'm trying to debug a bwa index run which as many bioinformatics tools, creates a file in the same directory as the input, and is tricky to …

2 comments
1 contribution in private repositories Nov 14

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