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Add option to reason command to add axiom annotations to all added inferred axioms #67

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cmungall opened this issue Apr 28, 2016 · 2 comments

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@cmungall
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@cmungall cmungall commented Apr 28, 2016

GO pipeline depends on inferred axioms being tagged:

is_a: GO:0030155 {is_inferred="true"} ! regulation of cell adhesion

Add reason option -a Annotation

where Annotation is functional syntax for the annotation

alternatively -a P V with built in assumption about filler type

@cmungall
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@cmungall cmungall commented Jun 9, 2016

Consider extracting https://github.com/owlcollab/owltools/blob/master/OWLTools-Core/src/main/java/owltools/graph/AxiomAnnotationTools.java from OWLTools into its own library or robot

For now, we will only annotate subClassOf axioms

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@matentzn
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@matentzn matentzn commented Jul 28, 2020

Was there a technical reason for this restriction? I think it would be great if it worked for all axiom generators; is this a limitation of the OWL API?

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