Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Add option to reason command to add axiom annotations to all added inferred axioms #67

Closed
cmungall opened this Issue Apr 28, 2016 · 1 comment

Comments

Projects
None yet
1 participant
@cmungall
Copy link
Contributor

cmungall commented Apr 28, 2016

GO pipeline depends on inferred axioms being tagged:

is_a: GO:0030155 {is_inferred="true"} ! regulation of cell adhesion

Add reason option -a Annotation

where Annotation is functional syntax for the annotation

alternatively -a P V with built in assumption about filler type

@cmungall

This comment has been minimized.

Copy link
Contributor Author

cmungall commented Jun 9, 2016

Consider extracting https://github.com/owlcollab/owltools/blob/master/OWLTools-Core/src/main/java/owltools/graph/AxiomAnnotationTools.java from OWLTools into its own library or robot

For now, we will only annotate subClassOf axioms

cmungall added a commit that referenced this issue Jun 9, 2016

cmungall added a commit that referenced this issue Jun 10, 2016

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
You can’t perform that action at this time.