Java binding of the MPI operation {@code MPI_ALLTOALLW}. + * @param sendBuf send buffer + * @param sendCount number of items sent to each buffer + * @param sDispls displacements from which to take outgoing data + * @param sendTypes datatypes of send buffer items + * @param recvBuf receive buffer + * @param recvCount number of elements received from each process + * @param rDispls displacements at which to place incoming data + * @param recvTypes datatype of each item in receive buffer + * @throws MPIException Signals that an MPI exception of some sort has occurred. + */ +public final void allToAllw( + Buffer sendBuf, int[] sendCount, int[] sDispls, Datatype[] sendTypes, + Buffer recvBuf, int[] recvCount, int[] rDispls, Datatype[] recvTypes) + throws MPIException +{ + MPI.check(); + assertDirectBuffer(sendBuf, recvBuf); + + long[] sendHandles = convertTypeArray(sendTypes); + long[] recvHandles = convertTypeArray(recvTypes); + + allToAllw(handle, sendBuf, sendCount, sDispls, + sendHandles, recvBuf, recvCount, rDispls, + recvHandles); +} + +private native void allToAllw(long comm, + Buffer sendBuf, int[] sendCount, int[] sDispls, long[] sendTypes, + Buffer recvBuf, int[] recvCount, int[] rDispls, long[] recvTypes) + throws MPIException; + +/** + * Adds flexibility to {@code iAllToAll}: location of data for send is + * specified by {@code sDispls} and location to place data on receive + * side is specified by {@code rDispls}. + *
Java binding of the MPI operation {@code MPI_IALLTOALLW}. + * @param sendBuf send buffer + * @param sendCount number of items sent to each buffer + * @param sDispls displacements from which to take outgoing data + * @param sendTypes datatype send buffer items + * @param recvBuf receive buffer + * @param recvCount number of elements received from each process + * @param rDispls displacements at which to place incoming data + * @param recvTypes datatype of each item in receive buffer + * @return communication request + * @throws MPIException Signals that an MPI exception of some sort has occurred. + */ +public final Request iAllToAllw( + Buffer sendBuf, int[] sendCount, int[] sDispls, Datatype[] sendTypes, + Buffer recvBuf, int[] recvCount, int[] rDispls, Datatype[] recvTypes) + throws MPIException +{ + MPI.check(); + assertDirectBuffer(sendBuf, recvBuf); + + long[] sendHandles = convertTypeArray(sendTypes); + long[] recvHandles = convertTypeArray(recvTypes); + + return new Request(iAllToAllw( + handle, sendBuf, sendCount, sDispls, sendHandles, + recvBuf, recvCount, rDispls, recvHandles)); +} + +private native long iAllToAllw(long comm, + Buffer sendBuf, int[] sendCount, int[] sDispls, long[] sendTypes, + Buffer recvBuf, int[] recvCount, int[] rDispls, long[] recvTypes) + throws MPIException; + /** * Java binding of {@code MPI_NEIGHBOR_ALLGATHER}. * @param sendbuf send buffer @@ -3232,4 +3306,21 @@ public final String getName() throws MPIException private native String getName(long handle) throws MPIException; +/** + * A helper method to convert an array of Datatypes to + * an array of longs (handles). + * @param dArray Array of Datatypes + * @return converted Datatypes + */ +private long[] convertTypeArray(Datatype[] dArray) { + long[] lArray = new long[dArray.length]; + + for(int i = 0; i < lArray.length; i++) { + if(dArray[i] != null) { + lArray[i] = dArray[i].handle; + } + } + return lArray; +} + } // Comm diff --git a/ompi/mpi/java/java/Datatype.java b/ompi/mpi/java/java/Datatype.java index 5a96889140..be3c9b80e4 100644 --- a/ompi/mpi/java/java/Datatype.java +++ b/ompi/mpi/java/java/Datatype.java @@ -9,6 +9,8 @@ * University of Stuttgart. All rights reserved. * Copyright (c) 2004-2005 The Regents of the University of California. * All rights reserved. + * Copyright (c) 2015 Los Alamos National Security, LLC. All rights + * reserved. * $COPYRIGHT$ * * Additional copyrights may follow diff --git a/ompi/mpi/java/java/DoubleInt.java b/ompi/mpi/java/java/DoubleInt.java index eb6ada66fb..b122afc68b 100644 --- a/ompi/mpi/java/java/DoubleInt.java +++ b/ompi/mpi/java/java/DoubleInt.java @@ -9,6 +9,8 @@ * University of Stuttgart. All rights reserved. * Copyright (c) 2004-2005 The Regents of the University of California. * All rights reserved. + * Copyright (c) 2015 Los Alamos National Security, LLC. All rights + * reserved. * $COPYRIGHT$ * * Additional copyrights may follow diff --git a/ompi/mpi/java/java/File.java b/ompi/mpi/java/java/File.java index 5a2b453066..9777895af2 100644 --- a/ompi/mpi/java/java/File.java +++ b/ompi/mpi/java/java/File.java @@ -9,6 +9,8 @@ * University of Stuttgart. All rights reserved. * Copyright (c) 2004-2005 The Regents of the University of California. * All rights reserved. + * Copyright (c) 2015 Los Alamos National Security, LLC. All rights + * reserved. * $COPYRIGHT$ * * Additional copyrights may follow diff --git a/ompi/mpi/java/java/FloatInt.java b/ompi/mpi/java/java/FloatInt.java index 5950440c93..b2c0a584f3 100644 --- a/ompi/mpi/java/java/FloatInt.java +++ b/ompi/mpi/java/java/FloatInt.java @@ -9,6 +9,8 @@ * University of Stuttgart. All rights reserved. * Copyright (c) 2004-2005 The Regents of the University of California. * All rights reserved. + * Copyright (c) 2015 Los Alamos National Security, LLC. All rights + * reserved. * $COPYRIGHT$ * * Additional copyrights may follow diff --git a/ompi/mpi/java/java/Freeable.java b/ompi/mpi/java/java/Freeable.java index 7b9c0697e7..e889720ccf 100644 --- a/ompi/mpi/java/java/Freeable.java +++ b/ompi/mpi/java/java/Freeable.java @@ -9,6 +9,8 @@ * University of Stuttgart. All rights reserved. * Copyright (c) 2004-2005 The Regents of the University of California. * All rights reserved. + * Copyright (c) 2015 Los Alamos National Security, LLC. All rights + * reserved. * $COPYRIGHT$ * * Additional copyrights may follow diff --git a/ompi/mpi/java/java/GraphComm.java b/ompi/mpi/java/java/GraphComm.java index 65639334f8..d40d21422d 100644 --- a/ompi/mpi/java/java/GraphComm.java +++ b/ompi/mpi/java/java/GraphComm.java @@ -9,6 +9,8 @@ * University of Stuttgart. All rights reserved. * Copyright (c) 2004-2005 The Regents of the University of California. * All rights reserved. + * Copyright (c) 2015 Los Alamos National Security, LLC. All rights + * reserved. * $COPYRIGHT$ * * Additional copyrights may follow diff --git a/ompi/mpi/java/java/Group.java b/ompi/mpi/java/java/Group.java index 0b225cd98b..1eaf3042af 100644 --- a/ompi/mpi/java/java/Group.java +++ b/ompi/mpi/java/java/Group.java @@ -9,6 +9,8 @@ * University of Stuttgart. All rights reserved. * Copyright (c) 2004-2005 The Regents of the University of California. * All rights reserved. + * Copyright (c) 2015 Los Alamos National Security, LLC. All rights + * reserved. * $COPYRIGHT$ * * Additional copyrights may follow diff --git a/ompi/mpi/java/java/Info.java b/ompi/mpi/java/java/Info.java index 04ff3acfbe..3d1b2f7a67 100644 --- a/ompi/mpi/java/java/Info.java +++ b/ompi/mpi/java/java/Info.java @@ -9,6 +9,8 @@ * University of Stuttgart. All rights reserved. * Copyright (c) 2004-2005 The Regents of the University of California. * All rights reserved. + * Copyright (c) 2015 Los Alamos National Security, LLC. All rights + * reserved. * $COPYRIGHT$ * * Additional copyrights may follow diff --git a/ompi/mpi/java/java/Int2.java b/ompi/mpi/java/java/Int2.java index 73c93a6fec..2f3a585405 100644 --- a/ompi/mpi/java/java/Int2.java +++ b/ompi/mpi/java/java/Int2.java @@ -9,6 +9,8 @@ * University of Stuttgart. All rights reserved. * Copyright (c) 2004-2005 The Regents of the University of California. * All rights reserved. + * Copyright (c) 2015 Los Alamos National Security, LLC. All rights + * reserved. * $COPYRIGHT$ * * Additional copyrights may follow diff --git a/ompi/mpi/java/java/Intercomm.java b/ompi/mpi/java/java/Intercomm.java index f36f21295c..1b206f5e6a 100644 --- a/ompi/mpi/java/java/Intercomm.java +++ b/ompi/mpi/java/java/Intercomm.java @@ -9,6 +9,8 @@ * University of Stuttgart. All rights reserved. * Copyright (c) 2004-2005 The Regents of the University of California. * All rights reserved. + * Copyright (c) 2015 Los Alamos National Security, LLC. All rights + * reserved. * $COPYRIGHT$ * * Additional copyrights may follow diff --git a/ompi/mpi/java/java/LongInt.java b/ompi/mpi/java/java/LongInt.java index fcde87c236..fd5f85cf0a 100644 --- a/ompi/mpi/java/java/LongInt.java +++ b/ompi/mpi/java/java/LongInt.java @@ -9,6 +9,8 @@ * University of Stuttgart. All rights reserved. * Copyright (c) 2004-2005 The Regents of the University of California. * All rights reserved. + * Copyright (c) 2015 Los Alamos National Security, LLC. All rights + * reserved. * $COPYRIGHT$ * * Additional copyrights may follow diff --git a/ompi/mpi/java/java/Message.java b/ompi/mpi/java/java/Message.java index 2a429bd46e..b4efbec6f7 100644 --- a/ompi/mpi/java/java/Message.java +++ b/ompi/mpi/java/java/Message.java @@ -9,6 +9,8 @@ * University of Stuttgart. All rights reserved. * Copyright (c) 2004-2005 The Regents of the University of California. * All rights reserved. + * Copyright (c) 2015 Los Alamos National Security, LLC. All rights + * reserved. * $COPYRIGHT$ * * Additional copyrights may follow diff --git a/ompi/mpi/java/java/Op.java b/ompi/mpi/java/java/Op.java index f680449a44..ffd3ffbf6d 100644 --- a/ompi/mpi/java/java/Op.java +++ b/ompi/mpi/java/java/Op.java @@ -9,6 +9,8 @@ * University of Stuttgart. All rights reserved. * Copyright (c) 2004-2005 The Regents of the University of California. * All rights reserved. + * Copyright (c) 2015 Los Alamos National Security, LLC. All rights + * reserved. * $COPYRIGHT$ * * Additional copyrights may follow diff --git a/ompi/mpi/java/java/Prequest.java b/ompi/mpi/java/java/Prequest.java index 2ddd018d16..fd7b88706b 100644 --- a/ompi/mpi/java/java/Prequest.java +++ b/ompi/mpi/java/java/Prequest.java @@ -9,6 +9,8 @@ * University of Stuttgart. All rights reserved. * Copyright (c) 2004-2005 The Regents of the University of California. * All rights reserved. + * Copyright (c) 2015 Los Alamos National Security, LLC. All rights + * reserved. * $COPYRIGHT$ * * Additional copyrights may follow diff --git a/ompi/mpi/java/java/Request.java b/ompi/mpi/java/java/Request.java index afe2a80091..dd86880ca7 100644 --- a/ompi/mpi/java/java/Request.java +++ b/ompi/mpi/java/java/Request.java @@ -9,6 +9,8 @@ * University of Stuttgart. All rights reserved. * Copyright (c) 2004-2005 The Regents of the University of California. * All rights reserved. + * Copyright (c) 2015 Los Alamos National Security, LLC. All rights + * reserved. * $COPYRIGHT$ * * Additional copyrights may follow diff --git a/ompi/mpi/java/java/ShortInt.java b/ompi/mpi/java/java/ShortInt.java index 6e81f9baa1..c335e10c6e 100644 --- a/ompi/mpi/java/java/ShortInt.java +++ b/ompi/mpi/java/java/ShortInt.java @@ -9,6 +9,8 @@ * University of Stuttgart. All rights reserved. * Copyright (c) 2004-2005 The Regents of the University of California. * All rights reserved. + * Copyright (c) 2015 Los Alamos National Security, LLC. All rights + * reserved. * $COPYRIGHT$ * * Additional copyrights may follow diff --git a/ompi/mpi/java/java/Status.java b/ompi/mpi/java/java/Status.java index 4830e05e5f..81ed8efebf 100644 --- a/ompi/mpi/java/java/Status.java +++ b/ompi/mpi/java/java/Status.java @@ -9,6 +9,8 @@ * University of Stuttgart. All rights reserved. * Copyright (c) 2004-2005 The Regents of the University of California. * All rights reserved. + * Copyright (c) 2015 Los Alamos National Security, LLC. All rights + * reserved. * $COPYRIGHT$ * * Additional copyrights may follow diff --git a/ompi/mpi/java/java/Struct.java b/ompi/mpi/java/java/Struct.java index e7d4fa1a90..65695cb9d6 100644 --- a/ompi/mpi/java/java/Struct.java +++ b/ompi/mpi/java/java/Struct.java @@ -9,6 +9,8 @@ * University of Stuttgart. All rights reserved. * Copyright (c) 2004-2005 The Regents of the University of California. * All rights reserved. + * Copyright (c) 2015 Los Alamos National Security, LLC. All rights + * reserved. * $COPYRIGHT$ * * Additional copyrights may follow diff --git a/ompi/mpi/java/java/UserFunction.java b/ompi/mpi/java/java/UserFunction.java index 65e4cf2f6f..e3630413d8 100644 --- a/ompi/mpi/java/java/UserFunction.java +++ b/ompi/mpi/java/java/UserFunction.java @@ -9,6 +9,8 @@ * University of Stuttgart. All rights reserved. * Copyright (c) 2004-2005 The Regents of the University of California. * All rights reserved. + * Copyright (c) 2015 Los Alamos National Security, LLC. All rights + * reserved. * $COPYRIGHT$ * * Additional copyrights may follow