Browse the notebooks on GitHub or try out
cooler with a brief interactive tutorial by clicking the Launch Binder button above. It will launch a "Binder" application using the code in this repository.
If you are experiencing delays, please check the Binder system status. The service may be down.
To start, after launching the binder, simply click on one of the IPython Notebook files:
- cooler_cli.ipynb for a walkthrough of the command line interface.
- cooler_api.ipynb for a walkthrough of the Python API.
To run the code in a cell, press
shift+enter. Individual cells can then be modified and re-run. To flush the current set of variables, restart the notebook kernel from the Kernel menu.
Also see the notebooks from our Hi-C data analysis bootcamp.