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We need to do a few changes to the main OpenCGA configuration file.
Add:
A new batch section in catalog for the execution of internal tasks.
batch:
id: ""# SGE, SLURMqueue: ""# Queue idtimeout: 60# Maximum time in minutes a task can be running
Remove:
userDefaultQuota
tempJobsDir
toolDir
catalog.offset: Not in use since 1.4.0
Rename:
dataDir for workspace
catalog.search for catalog.searchEngine
Other changes:
catalog.searchEngine should have the same database sections as catalog.database
audit section for something similar to:
audit:
manager: ""# Java manager of the audit implementation to be used to audit. If empty, catalog database will be used.maxDocuments: 20000000# Maximum number of documents that will be created in the audit collection.maxSize: 100# Maximum size that the audit collection will have in Gigabytes (GB).
The text was updated successfully, but these errors were encountered:
We need to do a few changes to the main OpenCGA configuration file.
Remove:
Rename:
Other changes:
The text was updated successfully, but these errors were encountered: