Skip to content
OMERO.web EMDB
Python JavaScript
Find file
Fetching latest commit…
Cannot retrieve the latest commit at this time.
Failed to load latest commit information.
media/webemdb
templates/webemdb
LICENSE.txt
README.md
__init__.py
models.py
settings.py
urls.py
views.py

README.md

OMERO.web EMDB

Open Microscopy Environment EMDB OMERO.web extension application.

Requirements

  • OMERO 4.4.0 or later

Development Installation

Clone the repository in to your OMERO.web installation:

cd components/tools/OmeroWeb/omeroweb/
git clone git://github.com/openmicroscopy/webemdb.git
path/to/bin/omero config set omero.web.apps '["webemdb"]'

Now start up OMERO.web as normal in your development environment.

Production Installation

Install the latest version of OMERO.server and OMERO.web and then:

cd $OMERO_HOME/lib/python/omeroweb
wget -O master.zip https://github.com/openmicroscopy/webemdb/zipball/master
unzip master.zip
mv openmicroscopy-webemdb-* webemdb
path/to/bin/omero config set omero.web.apps '["webemdb"]'

You can then configure OMERO.web EMDB as per normal:

In order to enable the EMAN2 and caching functionality required for some pages of OMERO.web EMDB webemdb, you need to install EMAN2 so that:

from EMAN2 import *

produces no errors and then configure the following options:

$ bin/omero config set omero.web.use_eman2 True
$ bin/omero config set omero.web.cache_backend 'file:///var/tmp/django_cache'
Something went wrong with that request. Please try again.