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python library for interacting with Open Tree of Life resources
OpenTree Web-Services Wrapper
doc store for the Open Tree of Life study curation API
opentree index using postgres and pyramid
miscellaneous scripts and data for concerns that span more than one of the Open Tree code repositories: integration tests, system statistics, etc.
Opentree browsing and curation web site. For overarching or cross-repo concerns, please see the 'germinator' repo.
A collection of current (and past) server configuration files for opentree components
Organization page with description of repositories:
ansible playbook for installation of OpenTree otindex
Yet another testing repository. This one is full size for performance testing. But still temporary.
standalone test of web services
Production data for taxonomic amendments API (peyotl)
API access to Open Tree of Life treestore
Open Tree Reference Taxonomy (OTT) tools
Test data for taxonomic amendments API (peyotl)
Generate repeatable, data-driven, publication quality figures of trees.
C++14 lib for parsing of trees from newick, nexson, and taxonomy.tsv formats; tree calculations and manipulations
Test data repository for Tree Illustrator
Collections of trees from the OpenTree datastore.
Python bindings for OpenTree services
Workshop/hackathon for interoperability across tree viewers
make-based supertree pipeline
Static content related to the project; the webroot for the files.opentreeoflife.org web site. The repo contains all of the smallish files: indexes, READMEs, and so on. Larger files such as taxonomies and synthetic trees on the web site but not in git.
indexing service for the OpenTreeOfLife nexson repository
Source tree graph database
OpenTree / FuturePhy workshops