From 337c6db56cdb6f2d3b7a986f42d0c46a48cda584 Mon Sep 17 00:00:00 2001 From: Jim Hokanson Date: Sun, 15 Sep 2013 16:56:30 -0400 Subject: [PATCH 1/4] Update features.md --- Movement/features.md | 56 +++++++++++++++++++++++++++++++++++++------- 1 file changed, 48 insertions(+), 8 deletions(-) diff --git a/Movement/features.md b/Movement/features.md index dacd4480..bc7e3bb7 100644 --- a/Movement/features.md +++ b/Movement/features.md @@ -1,20 +1,60 @@ ## List of Movement Features ## One source for features is listed at: -http://www.nature.com/nmeth/journal/vaop/ncurrent/extref/nmeth.2560-S3.xlsx -TODO: Eventually it would be nice to have a list and some illustration via data +http://www.nature.com/nmeth/journal/v10/n9/extref/nmeth.2560-S3.xlsx -A better list is available in the Nature Methods paper. +NOTE: We are currently going through the information from Yemini et al and compiling the lists seen below. +## TODOS ## +- Eventually it would be nice to have a list and some illustration via data +- Include other sources ... + +## Morphology Features ## +- Length - (um) skeleton length +- Width - (um) average width of subsection in microns + - head, midbody, tail +- Area - (um^2) # of pixels within contour converted to um^2 +- Area/Length +- Width/Length + +## Posture Features ## +- Bends +- Bend Count +- Eccentricity +- Amplitude +- Wavelength +- Track Length +- Coils +- Eigen Projections +- Orientation + +## Motion Features ## +- Velocity +- Motion States +- Crawling +- Foraging +- Turns + +## Path Features ## +- Range +- Dwelling +- Curvature + +## OLD LIST ## +NOTE: Some of these still need to be included above ... A brief list (not yet exhaustive): - egg laying - omega bends - pirouettes - coiled shapes - defecation -- morphology - - length and width at various locations - - area within its contour - - width/length - - area/length + + +## Sources ## + +1. Yemini, E., Jucikas, T., Grundy, L. J., Brown, A. E. X. & Schafer, W. R. A database of Caenorhabditis elegans behavioral phenotypes. Nature methods (2013). doi:10.1038/nmeth.2560 + +In particular see: + +http://www.nature.com/nmeth/journal/v10/n9/extref/nmeth.2560-S1.pdf From 5adea3a0d43c1c56cb6f3175aae3cb24a8316307 Mon Sep 17 00:00:00 2001 From: Jim Hokanson Date: Sun, 15 Sep 2013 17:20:56 -0400 Subject: [PATCH 2/4] Addition of csv file that describes all features --- Movement/features/nmeth.2560-S3.csv | 704 ++++++++++++++++++++++++++++ 1 file changed, 704 insertions(+) create mode 100644 Movement/features/nmeth.2560-S3.csv diff --git a/Movement/features/nmeth.2560-S3.csv b/Movement/features/nmeth.2560-S3.csv new file mode 100644 index 00000000..2237fedf --- /dev/null +++ b/Movement/features/nmeth.2560-S3.csv @@ -0,0 +1,704 @@ +Feature Number,,Feature Name, Feature Subdivision 1,Feature Subdivision 2,,Units +,,,,,, +1,,Length,,,,Microns +2,,Length,Forward,,,Microns +3,,Length,Paused,,,Microns +4,,Length,Backward,,,Microns +5,,Head Width,,,,Microns +6,,Head Width,Forward,,,Microns +7,,Head Width,Paused,,,Microns +8,,Head Width,Backward,,,Microns +9,,Midbody Width,,,,Microns +10,,Midbody Width,Forward,,,Microns +11,,Midbody Width,Paused,,,Microns +12,,Midbody Width,Backward,,,Microns +13,,Tail Width,,,,Microns +14,,Tail Width,Forward,,,Microns +15,,Tail Width,Paused,,,Microns +16,,Tail Width,Backward,,,Microns +17,,Area,,,,Micronsı +18,,Area,Forward,,,Micronsı +19,,Area,Paused,,,Micronsı +20,,Area,Backward,,,Micronsı +21,,Area/Length,,,,Microns +22,,Area/Length,Forward,,,Microns +23,,Area/Length,Paused,,,Microns +24,,Area/Length,Backward,,,Microns +25,,Width/Length,,,,No Units +26,,Width/Length,Forward,,,No Units +27,,Width/Length,Paused,,,No Units +28,,Width/Length,Backward,,,No Units +29,,Head Bend Mean (+/- = D/V Inside),,,,Degrees +30,,Head Bend Mean (+/- = D/V Inside),,Absolute,,Degrees +31,,Head Bend Mean (+/- = D/V Inside),,Positive,,Degrees +32,,Head Bend Mean (+/- = D/V Inside),,Negative,,Degrees +33,,Head Bend Mean (+/- = D/V Inside),Forward,,,Degrees +34,,Head Bend Mean (+/- = D/V Inside),Forward,Absolute,,Degrees +35,,Head Bend Mean (+/- = D/V Inside),Forward,Positive,,Degrees +36,,Head Bend Mean (+/- = D/V Inside),Forward,Negative,,Degrees +37,,Head Bend Mean (+/- = D/V Inside),Paused,,,Degrees +38,,Head Bend Mean (+/- = D/V Inside),Paused,Absolute,,Degrees +39,,Head Bend Mean (+/- = D/V Inside),Paused,Positive,,Degrees +40,,Head Bend Mean (+/- = D/V Inside),Paused,Negative,,Degrees +41,,Head Bend Mean (+/- = D/V Inside),Backward,,,Degrees +42,,Head Bend Mean (+/- = D/V Inside),Backward,Absolute,,Degrees +43,,Head Bend Mean (+/- = D/V Inside),Backward,Positive,,Degrees +44,,Head Bend Mean (+/- = D/V Inside),Backward,Negative,,Degrees +45,,Neck Bend Mean (+/- = D/V Inside),,,,Degrees +46,,Neck Bend Mean (+/- = D/V Inside),,Absolute,,Degrees +47,,Neck Bend Mean (+/- = D/V Inside),,Positive,,Degrees +48,,Neck Bend Mean (+/- = D/V Inside),,Negative,,Degrees +49,,Neck Bend Mean (+/- = D/V Inside),Forward,,,Degrees +50,,Neck Bend Mean (+/- = D/V Inside),Forward,Absolute,,Degrees +51,,Neck Bend Mean (+/- = D/V Inside),Forward,Positive,,Degrees +52,,Neck Bend Mean (+/- = D/V Inside),Forward,Negative,,Degrees +53,,Neck Bend Mean (+/- = D/V Inside),Paused,,,Degrees +54,,Neck Bend Mean (+/- = D/V Inside),Paused,Absolute,,Degrees +55,,Neck Bend Mean (+/- = D/V Inside),Paused,Positive,,Degrees +56,,Neck Bend Mean (+/- = D/V Inside),Paused,Negative,,Degrees +57,,Neck Bend Mean (+/- = D/V Inside),Backward,,,Degrees +58,,Neck Bend Mean (+/- = D/V Inside),Backward,Absolute,,Degrees +59,,Neck Bend Mean (+/- = D/V Inside),Backward,Positive,,Degrees +60,,Neck Bend Mean (+/- = D/V Inside),Backward,Negative,,Degrees +61,,Midbody Bend Mean (+/- = D/V Inside),,,,Degrees +62,,Midbody Bend Mean (+/- = D/V Inside),,Absolute,,Degrees +63,,Midbody Bend Mean (+/- = D/V Inside),,Positive,,Degrees +64,,Midbody Bend Mean (+/- = D/V Inside),,Negative,,Degrees +65,,Midbody Bend Mean (+/- = D/V Inside),Forward,,,Degrees +66,,Midbody Bend Mean (+/- = D/V Inside),Forward,Absolute,,Degrees +67,,Midbody Bend Mean (+/- = D/V Inside),Forward,Positive,,Degrees +68,,Midbody Bend Mean (+/- = D/V Inside),Forward,Negative,,Degrees +69,,Midbody Bend Mean (+/- = D/V Inside),Paused,,,Degrees +70,,Midbody Bend Mean (+/- = D/V Inside),Paused,Absolute,,Degrees +71,,Midbody Bend Mean (+/- = D/V Inside),Paused,Positive,,Degrees +72,,Midbody Bend Mean (+/- = D/V Inside),Paused,Negative,,Degrees +73,,Midbody Bend Mean (+/- = D/V Inside),Backward,,,Degrees +74,,Midbody Bend Mean (+/- = D/V Inside),Backward,Absolute,,Degrees +75,,Midbody Bend Mean (+/- = D/V Inside),Backward,Positive,,Degrees +76,,Midbody Bend Mean (+/- = D/V Inside),Backward,Negative,,Degrees +77,,Hips Bend Mean (+/- = D/V Inside),,,,Degrees +78,,Hips Bend Mean (+/- = D/V Inside),,Absolute,,Degrees +79,,Hips Bend Mean (+/- = D/V Inside),,Positive,,Degrees +80,,Hips Bend Mean (+/- = D/V Inside),,Negative,,Degrees +81,,Hips Bend Mean (+/- = D/V Inside),Forward,,,Degrees +82,,Hips Bend Mean (+/- = D/V Inside),Forward,Absolute,,Degrees +83,,Hips Bend Mean (+/- = D/V Inside),Forward,Positive,,Degrees +84,,Hips Bend Mean (+/- = D/V Inside),Forward,Negative,,Degrees +85,,Hips Bend Mean (+/- = D/V Inside),Paused,,,Degrees +86,,Hips Bend Mean (+/- = D/V Inside),Paused,Absolute,,Degrees +87,,Hips Bend Mean (+/- = D/V Inside),Paused,Positive,,Degrees +88,,Hips Bend Mean (+/- = D/V Inside),Paused,Negative,,Degrees +89,,Hips Bend Mean (+/- = D/V Inside),Backward,,,Degrees +90,,Hips Bend Mean (+/- = D/V Inside),Backward,Absolute,,Degrees +91,,Hips Bend Mean (+/- = D/V Inside),Backward,Positive,,Degrees +92,,Hips Bend Mean (+/- = D/V Inside),Backward,Negative,,Degrees +93,,Tail Bend Mean (+/- = D/V Inside),,,,Degrees +94,,Tail Bend Mean (+/- = D/V Inside),,Absolute,,Degrees +95,,Tail Bend Mean (+/- = D/V Inside),,Positive,,Degrees +96,,Tail Bend Mean (+/- = D/V Inside),,Negative,,Degrees +97,,Tail Bend Mean (+/- = D/V Inside),Forward,,,Degrees +98,,Tail Bend Mean (+/- = D/V Inside),Forward,Absolute,,Degrees +99,,Tail Bend Mean (+/- = D/V Inside),Forward,Positive,,Degrees +100,,Tail Bend Mean (+/- = D/V Inside),Forward,Negative,,Degrees +101,,Tail Bend Mean (+/- = D/V Inside),Paused,,,Degrees +102,,Tail Bend Mean (+/- = D/V Inside),Paused,Absolute,,Degrees +103,,Tail Bend Mean (+/- = D/V Inside),Paused,Positive,,Degrees +104,,Tail Bend Mean (+/- = D/V Inside),Paused,Negative,,Degrees +105,,Tail Bend Mean (+/- = D/V Inside),Backward,,,Degrees +106,,Tail Bend Mean (+/- = D/V Inside),Backward,Absolute,,Degrees +107,,Tail Bend Mean (+/- = D/V Inside),Backward,Positive,,Degrees +108,,Tail Bend Mean (+/- = D/V Inside),Backward,Negative,,Degrees +109,,Head Bend S.D. (+/- = D/V Inside),,,,Degrees +110,,Head Bend S.D. (+/- = D/V Inside),,Absolute,,Degrees +111,,Head Bend S.D. (+/- = D/V Inside),,Positive,,Degrees +112,,Head Bend S.D. (+/- = D/V Inside),,Negative,,Degrees +113,,Head Bend S.D. (+/- = D/V Inside),Forward,,,Degrees +114,,Head Bend S.D. (+/- = D/V Inside),Forward,Absolute,,Degrees +115,,Head Bend S.D. (+/- = D/V Inside),Forward,Positive,,Degrees +116,,Head Bend S.D. (+/- = D/V Inside),Forward,Negative,,Degrees +117,,Head Bend S.D. (+/- = D/V Inside),Paused,,,Degrees +118,,Head Bend S.D. (+/- = D/V Inside),Paused,Absolute,,Degrees +119,,Head Bend S.D. (+/- = D/V Inside),Paused,Positive,,Degrees +120,,Head Bend S.D. (+/- = D/V Inside),Paused,Negative,,Degrees +121,,Head Bend S.D. (+/- = D/V Inside),Backward,,,Degrees +122,,Head Bend S.D. (+/- = D/V Inside),Backward,Absolute,,Degrees +123,,Head Bend S.D. (+/- = D/V Inside),Backward,Positive,,Degrees +124,,Head Bend S.D. (+/- = D/V Inside),Backward,Negative,,Degrees +125,,Neck Bend S.D. (+/- = D/V Inside),,,,Degrees +126,,Neck Bend S.D. (+/- = D/V Inside),,Absolute,,Degrees +127,,Neck Bend S.D. (+/- = D/V Inside),,Positive,,Degrees +128,,Neck Bend S.D. (+/- = D/V Inside),,Negative,,Degrees +129,,Neck Bend S.D. (+/- = D/V Inside),Forward,,,Degrees +130,,Neck Bend S.D. (+/- = D/V Inside),Forward,Absolute,,Degrees +131,,Neck Bend S.D. (+/- = D/V Inside),Forward,Positive,,Degrees +132,,Neck Bend S.D. (+/- = D/V Inside),Forward,Negative,,Degrees +133,,Neck Bend S.D. (+/- = D/V Inside),Paused,,,Degrees +134,,Neck Bend S.D. (+/- = D/V Inside),Paused,Absolute,,Degrees +135,,Neck Bend S.D. (+/- = D/V Inside),Paused,Positive,,Degrees +136,,Neck Bend S.D. (+/- = D/V Inside),Paused,Negative,,Degrees +137,,Neck Bend S.D. (+/- = D/V Inside),Backward,,,Degrees +138,,Neck Bend S.D. (+/- = D/V Inside),Backward,Absolute,,Degrees +139,,Neck Bend S.D. (+/- = D/V Inside),Backward,Positive,,Degrees +140,,Neck Bend S.D. (+/- = D/V Inside),Backward,Negative,,Degrees +141,,Midbody Bend S.D. (+/- = D/V Inside),,,,Degrees +142,,Midbody Bend S.D. (+/- = D/V Inside),,Absolute,,Degrees +143,,Midbody Bend S.D. (+/- = D/V Inside),,Positive,,Degrees +144,,Midbody Bend S.D. (+/- = D/V Inside),,Negative,,Degrees +145,,Midbody Bend S.D. (+/- = D/V Inside),Forward,,,Degrees +146,,Midbody Bend S.D. (+/- = D/V Inside),Forward,Absolute,,Degrees +147,,Midbody Bend S.D. (+/- = D/V Inside),Forward,Positive,,Degrees +148,,Midbody Bend S.D. (+/- = D/V Inside),Forward,Negative,,Degrees +149,,Midbody Bend S.D. (+/- = D/V Inside),Paused,,,Degrees +150,,Midbody Bend S.D. (+/- = D/V Inside),Paused,Absolute,,Degrees +151,,Midbody Bend S.D. (+/- = D/V Inside),Paused,Positive,,Degrees +152,,Midbody Bend S.D. (+/- = D/V Inside),Paused,Negative,,Degrees +153,,Midbody Bend S.D. (+/- = D/V Inside),Backward,,,Degrees +154,,Midbody Bend S.D. (+/- = D/V Inside),Backward,Absolute,,Degrees +155,,Midbody Bend S.D. (+/- = D/V Inside),Backward,Positive,,Degrees +156,,Midbody Bend S.D. (+/- = D/V Inside),Backward,Negative,,Degrees +157,,Hips Bend S.D. (+/- = D/V Inside),,,,Degrees +158,,Hips Bend S.D. (+/- = D/V Inside),,Absolute,,Degrees +159,,Hips Bend S.D. (+/- = D/V Inside),,Positive,,Degrees +160,,Hips Bend S.D. (+/- = D/V Inside),,Negative,,Degrees +161,,Hips Bend S.D. (+/- = D/V Inside),Forward,,,Degrees +162,,Hips Bend S.D. (+/- = D/V Inside),Forward,Absolute,,Degrees +163,,Hips Bend S.D. (+/- = D/V Inside),Forward,Positive,,Degrees +164,,Hips Bend S.D. (+/- = D/V Inside),Forward,Negative,,Degrees +165,,Hips Bend S.D. (+/- = D/V Inside),Paused,,,Degrees +166,,Hips Bend S.D. (+/- = D/V Inside),Paused,Absolute,,Degrees +167,,Hips Bend S.D. (+/- = D/V Inside),Paused,Positive,,Degrees +168,,Hips Bend S.D. (+/- = D/V Inside),Paused,Negative,,Degrees +169,,Hips Bend S.D. (+/- = D/V Inside),Backward,,,Degrees +170,,Hips Bend S.D. (+/- = D/V Inside),Backward,Absolute,,Degrees +171,,Hips Bend S.D. (+/- = D/V Inside),Backward,Positive,,Degrees +172,,Hips Bend S.D. (+/- = D/V Inside),Backward,Negative,,Degrees +173,,Tail Bend S.D. (+/- = D/V Inside),,,,Degrees +174,,Tail Bend S.D. (+/- = D/V Inside),,Absolute,,Degrees +175,,Tail Bend S.D. (+/- = D/V Inside),,Positive,,Degrees +176,,Tail Bend S.D. (+/- = D/V Inside),,Negative,,Degrees +177,,Tail Bend S.D. (+/- = D/V Inside),Forward,,,Degrees +178,,Tail Bend S.D. (+/- = D/V Inside),Forward,Absolute,,Degrees +179,,Tail Bend S.D. (+/- = D/V Inside),Forward,Positive,,Degrees +180,,Tail Bend S.D. (+/- = D/V Inside),Forward,Negative,,Degrees +181,,Tail Bend S.D. (+/- = D/V Inside),Paused,,,Degrees +182,,Tail Bend S.D. (+/- = D/V Inside),Paused,Absolute,,Degrees +183,,Tail Bend S.D. (+/- = D/V Inside),Paused,Positive,,Degrees +184,,Tail Bend S.D. (+/- = D/V Inside),Paused,Negative,,Degrees +185,,Tail Bend S.D. (+/- = D/V Inside),Backward,,,Degrees +186,,Tail Bend S.D. (+/- = D/V Inside),Backward,Absolute,,Degrees +187,,Tail Bend S.D. (+/- = D/V Inside),Backward,Positive,,Degrees +188,,Tail Bend S.D. (+/- = D/V Inside),Backward,Negative,,Degrees +189,,Max Amplitude,,,,Microns +190,,Max Amplitude,Forward,,,Microns +191,,Max Amplitude,Paused,,,Microns +192,,Max Amplitude,Backward,,,Microns +193,,Amplitude Ratio,,,,No Units +194,,Amplitude Ratio,Forward,,,No Units +195,,Amplitude Ratio,Paused,,,No Units +196,,Amplitude Ratio,Backward,,,No Units +197,,Primary Wavelength,,,,Microns +198,,Primary Wavelength,Forward,,,Microns +199,,Primary Wavelength,Paused,,,Microns +200,,Primary Wavelength,Backward,,,Microns +201,,Secondary Wavelength,,,,Microns +202,,Secondary Wavelength,Forward,,,Microns +203,,Secondary Wavelength,Paused,,,Microns +204,,Secondary Wavelength,Backward,,,Microns +205,,Track Length,,,,Microns +206,,Track Length,Forward,,,Microns +207,,Track Length,Paused,,,Microns +208,,Track Length,Backward,,,Microns +209,,Eccentricity,,,,No Units +210,,Eccentricity,Forward,,,No Units +211,,Eccentricity,Paused,,,No Units +212,,Eccentricity,Backward,,,No Units +213,,Bend Count,,,,Counts +214,,Bend Count,Forward,,,Counts +215,,Bend Count,Paused,,,Counts +216,,Bend Count,Backward,,,Counts +217,,Coiling Events,Frequency,,,Hz +218,,Coiling Events,Time Ratio,,,No Units +219,,Coiling Events,Time,,,Seconds +220,,Coiling Events,Inter Time,,,Seconds +221,,Coiling Events,Inter Distance,,,Microns +222,,Tail-To-Head Orientation,,,,Degrees +223,,Tail-To-Head Orientation,,Absolute,,Degrees +224,,Tail-To-Head Orientation,,Positive,,Degrees +225,,Tail-To-Head Orientation,,Negative,,Degrees +226,,Tail-To-Head Orientation,Forward,,,Degrees +227,,Tail-To-Head Orientation,Forward,Absolute,,Degrees +228,,Tail-To-Head Orientation,Forward,Positive,,Degrees +229,,Tail-To-Head Orientation,Forward,Negative,,Degrees +230,,Tail-To-Head Orientation,Paused,,,Degrees +231,,Tail-To-Head Orientation,Paused,Absolute,,Degrees +232,,Tail-To-Head Orientation,Paused,Positive,,Degrees +233,,Tail-To-Head Orientation,Paused,Negative,,Degrees +234,,Tail-To-Head Orientation,Backward,,,Degrees +235,,Tail-To-Head Orientation,Backward,Absolute,,Degrees +236,,Tail-To-Head Orientation,Backward,Positive,,Degrees +237,,Tail-To-Head Orientation,Backward,Negative,,Degrees +238,,Head Orientation,,,,Degrees +239,,Head Orientation,,Absolute,,Degrees +240,,Head Orientation,,Positive,,Degrees +241,,Head Orientation,,Negative,,Degrees +242,,Head Orientation,Forward,,,Degrees +243,,Head Orientation,Forward,Absolute,,Degrees +244,,Head Orientation,Forward,Positive,,Degrees +245,,Head Orientation,Forward,Negative,,Degrees +246,,Head Orientation,Paused,,,Degrees +247,,Head Orientation,Paused,Absolute,,Degrees +248,,Head Orientation,Paused,Positive,,Degrees +249,,Head Orientation,Paused,Negative,,Degrees +250,,Head Orientation,Backward,,,Degrees +251,,Head Orientation,Backward,Absolute,,Degrees +252,,Head Orientation,Backward,Positive,,Degrees +253,,Head Orientation,Backward,Negative,,Degrees +254,,Tail Orientation,,,,Degrees +255,,Tail Orientation,,Absolute,,Degrees +256,,Tail Orientation,,Positive,,Degrees +257,,Tail Orientation,,Negative,,Degrees +258,,Tail Orientation,Forward,,,Degrees +259,,Tail Orientation,Forward,Absolute,,Degrees +260,,Tail Orientation,Forward,Positive,,Degrees +261,,Tail Orientation,Forward,Negative,,Degrees +262,,Tail Orientation,Paused,,,Degrees +263,,Tail Orientation,Paused,Absolute,,Degrees +264,,Tail Orientation,Paused,Positive,,Degrees +265,,Tail Orientation,Paused,Negative,,Degrees +266,,Tail Orientation,Backward,,,Degrees +267,,Tail Orientation,Backward,Absolute,,Degrees +268,,Tail Orientation,Backward,Positive,,Degrees +269,,Tail Orientation,Backward,Negative,,Degrees +270,,Eigen Projection 1,,,,No Units +271,,Eigen Projection 1,,Absolute,,No Units +272,,Eigen Projection 1,,Positive,,No Units +273,,Eigen Projection 1,,Negative,,No Units +274,,Eigen Projection 1,Forward,,,No Units +275,,Eigen Projection 1,Forward,Absolute,,No Units +276,,Eigen Projection 1,Forward,Positive,,No Units +277,,Eigen Projection 1,Forward,Negative,,No Units +278,,Eigen Projection 1,Paused,,,No Units +279,,Eigen Projection 1,Paused,Absolute,,No Units +280,,Eigen Projection 1,Paused,Positive,,No Units +281,,Eigen Projection 1,Paused,Negative,,No Units +282,,Eigen Projection 1,Backward,,,No Units +283,,Eigen Projection 1,Backward,Absolute,,No Units +284,,Eigen Projection 1,Backward,Positive,,No Units +285,,Eigen Projection 1,Backward,Negative,,No Units +286,,Eigen Projection 2,,,,No Units +287,,Eigen Projection 2,,Absolute,,No Units +288,,Eigen Projection 2,,Positive,,No Units +289,,Eigen Projection 2,,Negative,,No Units +290,,Eigen Projection 2,Forward,,,No Units +291,,Eigen Projection 2,Forward,Absolute,,No Units +292,,Eigen Projection 2,Forward,Positive,,No Units +293,,Eigen Projection 2,Forward,Negative,,No Units +294,,Eigen Projection 2,Paused,,,No Units +295,,Eigen Projection 2,Paused,Absolute,,No Units +296,,Eigen Projection 2,Paused,Positive,,No Units +297,,Eigen Projection 2,Paused,Negative,,No Units +298,,Eigen Projection 2,Backward,,,No Units +299,,Eigen Projection 2,Backward,Absolute,,No Units +300,,Eigen Projection 2,Backward,Positive,,No Units +301,,Eigen Projection 2,Backward,Negative,,No Units +302,,Eigen Projection 3,,,,No Units +303,,Eigen Projection 3,,Absolute,,No Units +304,,Eigen Projection 3,,Positive,,No Units +305,,Eigen Projection 3,,Negative,,No Units +306,,Eigen Projection 3,Forward,,,No Units +307,,Eigen Projection 3,Forward,Absolute,,No Units +308,,Eigen Projection 3,Forward,Positive,,No Units +309,,Eigen Projection 3,Forward,Negative,,No Units +310,,Eigen Projection 3,Paused,,,No Units +311,,Eigen Projection 3,Paused,Absolute,,No Units +312,,Eigen Projection 3,Paused,Positive,,No Units +313,,Eigen Projection 3,Paused,Negative,,No Units +314,,Eigen Projection 3,Backward,,,No Units +315,,Eigen Projection 3,Backward,Absolute,,No Units +316,,Eigen Projection 3,Backward,Positive,,No Units +317,,Eigen Projection 3,Backward,Negative,,No Units +318,,Eigen Projection 4,,,,No Units +319,,Eigen Projection 4,,Absolute,,No Units +320,,Eigen Projection 4,,Positive,,No Units +321,,Eigen Projection 4,,Negative,,No Units +322,,Eigen Projection 4,Forward,,,No Units +323,,Eigen Projection 4,Forward,Absolute,,No Units +324,,Eigen Projection 4,Forward,Positive,,No Units +325,,Eigen Projection 4,Forward,Negative,,No Units +326,,Eigen Projection 4,Paused,,,No Units +327,,Eigen Projection 4,Paused,Absolute,,No Units +328,,Eigen Projection 4,Paused,Positive,,No Units +329,,Eigen Projection 4,Paused,Negative,,No Units +330,,Eigen Projection 4,Backward,,,No Units +331,,Eigen Projection 4,Backward,Absolute,,No Units +332,,Eigen Projection 4,Backward,Positive,,No Units +333,,Eigen Projection 4,Backward,Negative,,No Units +334,,Eigen Projection 5,,,,No Units +335,,Eigen Projection 5,,Absolute,,No Units +336,,Eigen Projection 5,,Positive,,No Units +337,,Eigen Projection 5,,Negative,,No Units +338,,Eigen Projection 5,Forward,,,No Units +339,,Eigen Projection 5,Forward,Absolute,,No Units +340,,Eigen Projection 5,Forward,Positive,,No Units +341,,Eigen Projection 5,Forward,Negative,,No Units +342,,Eigen Projection 5,Paused,,,No Units +343,,Eigen Projection 5,Paused,Absolute,,No Units +344,,Eigen Projection 5,Paused,Positive,,No Units +345,,Eigen Projection 5,Paused,Negative,,No Units +346,,Eigen Projection 5,Backward,,,No Units +347,,Eigen Projection 5,Backward,Absolute,,No Units +348,,Eigen Projection 5,Backward,Positive,,No Units +349,,Eigen Projection 5,Backward,Negative,,No Units +350,,Eigen Projection 6,,,,No Units +351,,Eigen Projection 6,,Absolute,,No Units +352,,Eigen Projection 6,,Positive,,No Units +353,,Eigen Projection 6,,Negative,,No Units +354,,Eigen Projection 6,Forward,,,No Units +355,,Eigen Projection 6,Forward,Absolute,,No Units +356,,Eigen Projection 6,Forward,Positive,,No Units +357,,Eigen Projection 6,Forward,Negative,,No Units +358,,Eigen Projection 6,Paused,,,No Units +359,,Eigen Projection 6,Paused,Absolute,,No Units +360,,Eigen Projection 6,Paused,Positive,,No Units +361,,Eigen Projection 6,Paused,Negative,,No Units +362,,Eigen Projection 6,Backward,,,No Units +363,,Eigen Projection 6,Backward,Absolute,,No Units +364,,Eigen Projection 6,Backward,Positive,,No Units +365,,Eigen Projection 6,Backward,Negative,,No Units +366,,Forward Motion,Frequency,,,Hz +367,,Forward Motion,Time Ratio,,,No Units +368,,Forward Motion,Distance Ratio,,,No Units +369,,Forward Motion,Time,,,Seconds +370,,Forward Motion,Distance,,,Microns +371,,Forward Motion,Inter Time,,,Seconds +372,,Forward Motion,Inter Distance,,,Microns +373,,Paused Motion,Frequency,,,Hz +374,,Paused Motion,Time Ratio,,,No Units +375,,Paused Motion,Distance Ratio,,,No Units +376,,Paused Motion,Time,,,Seconds +377,,Paused Motion,Distance,,,Microns +378,,Paused Motion,Inter Time,,,Seconds +379,,Paused Motion,Inter Distance,,,Microns +380,,Backward Motion,Frequency,,,Hz +381,,Backward Motion,Time Ratio,,,No Units +382,,Backward Motion,Distance Ratio,,,No Units +383,,Backward Motion,Time,,,Seconds +384,,Backward Motion,Distance,,,Microns +385,,Backward Motion,Inter Time,,,Seconds +386,,Backward Motion,Inter Distance,,,Microns +387,,Head Tip Speed (+/- = Forward/Backward),,,,Microns/Seconds +388,,Head Tip Speed (+/- = Forward/Backward),,Absolute,,Microns/Seconds +389,,Head Tip Speed (+/- = Forward/Backward),,Positive,,Microns/Seconds +390,,Head Tip Speed (+/- = Forward/Backward),,Negative,,Microns/Seconds +391,,Head Tip Speed (+/- = Forward/Backward),Forward,,,Microns/Seconds +392,,Head Tip Speed (+/- = Forward/Backward),Forward,Absolute,,Microns/Seconds +393,,Head Tip Speed (+/- = Forward/Backward),Forward,Positive,,Microns/Seconds +394,,Head Tip Speed (+/- = Forward/Backward),Forward,Negative,,Microns/Seconds +395,,Head Tip Speed (+/- = Forward/Backward),Paused,,,Microns/Seconds +396,,Head Tip Speed (+/- = Forward/Backward),Paused,Absolute,,Microns/Seconds +397,,Head Tip Speed (+/- = Forward/Backward),Paused,Positive,,Microns/Seconds +398,,Head Tip Speed (+/- = Forward/Backward),Paused,Negative,,Microns/Seconds +399,,Head Tip Speed (+/- = Forward/Backward),Backward,,,Microns/Seconds +400,,Head Tip Speed (+/- = Forward/Backward),Backward,Absolute,,Microns/Seconds +401,,Head Tip Speed (+/- = Forward/Backward),Backward,Positive,,Microns/Seconds +402,,Head Tip Speed (+/- = Forward/Backward),Backward,Negative,,Microns/Seconds +403,,Head Speed (+/- = Forward/Backward),,,,Microns/Seconds +404,,Head Speed (+/- = Forward/Backward),,Absolute,,Microns/Seconds +405,,Head Speed (+/- = Forward/Backward),,Positive,,Microns/Seconds +406,,Head Speed (+/- = Forward/Backward),,Negative,,Microns/Seconds +407,,Head Speed (+/- = Forward/Backward),Forward,,,Microns/Seconds +408,,Head Speed (+/- = Forward/Backward),Forward,Absolute,,Microns/Seconds +409,,Head Speed (+/- = Forward/Backward),Forward,Positive,,Microns/Seconds +410,,Head Speed (+/- = Forward/Backward),Forward,Negative,,Microns/Seconds +411,,Head Speed (+/- = Forward/Backward),Paused,,,Microns/Seconds +412,,Head Speed (+/- = Forward/Backward),Paused,Absolute,,Microns/Seconds +413,,Head Speed (+/- = Forward/Backward),Paused,Positive,,Microns/Seconds +414,,Head Speed (+/- = Forward/Backward),Paused,Negative,,Microns/Seconds +415,,Head Speed (+/- = Forward/Backward),Backward,,,Microns/Seconds +416,,Head Speed (+/- = Forward/Backward),Backward,Absolute,,Microns/Seconds +417,,Head Speed (+/- = Forward/Backward),Backward,Positive,,Microns/Seconds +418,,Head Speed (+/- = Forward/Backward),Backward,Negative,,Microns/Seconds +419,,Midbody Speed (+/- = Forward/Backward),,,,Microns/Seconds +420,,Midbody Speed (+/- = Forward/Backward),,Absolute,,Microns/Seconds +421,,Midbody Speed (+/- = Forward/Backward),,Positive,,Microns/Seconds +422,,Midbody Speed (+/- = Forward/Backward),,Negative,,Microns/Seconds +423,,Midbody Speed (+/- = Forward/Backward),Forward,,,Microns/Seconds +424,,Midbody Speed (+/- = Forward/Backward),Forward,Absolute,,Microns/Seconds +425,,Midbody Speed (+/- = Forward/Backward),Forward,Positive,,Microns/Seconds +426,,Midbody Speed (+/- = Forward/Backward),Forward,Negative,,Microns/Seconds +427,,Midbody Speed (+/- = Forward/Backward),Paused,,,Microns/Seconds +428,,Midbody Speed (+/- = Forward/Backward),Paused,Absolute,,Microns/Seconds +429,,Midbody Speed (+/- = Forward/Backward),Paused,Positive,,Microns/Seconds +430,,Midbody Speed (+/- = Forward/Backward),Paused,Negative,,Microns/Seconds +431,,Midbody Speed (+/- = Forward/Backward),Backward,,,Microns/Seconds +432,,Midbody Speed (+/- = Forward/Backward),Backward,Absolute,,Microns/Seconds +433,,Midbody Speed (+/- = Forward/Backward),Backward,Positive,,Microns/Seconds +434,,Midbody Speed (+/- = Forward/Backward),Backward,Negative,,Microns/Seconds +435,,Tail Speed (+/- = Forward/Backward),,,,Microns/Seconds +436,,Tail Speed (+/- = Forward/Backward),,Absolute,,Microns/Seconds +437,,Tail Speed (+/- = Forward/Backward),,Positive,,Microns/Seconds +438,,Tail Speed (+/- = Forward/Backward),,Negative,,Microns/Seconds +439,,Tail Speed (+/- = Forward/Backward),Forward,,,Microns/Seconds +440,,Tail Speed (+/- = Forward/Backward),Forward,Absolute,,Microns/Seconds +441,,Tail Speed (+/- = Forward/Backward),Forward,Positive,,Microns/Seconds +442,,Tail Speed (+/- = Forward/Backward),Forward,Negative,,Microns/Seconds +443,,Tail Speed (+/- = Forward/Backward),Paused,,,Microns/Seconds +444,,Tail Speed (+/- = Forward/Backward),Paused,Absolute,,Microns/Seconds +445,,Tail Speed (+/- = Forward/Backward),Paused,Positive,,Microns/Seconds +446,,Tail Speed (+/- = Forward/Backward),Paused,Negative,,Microns/Seconds +447,,Tail Speed (+/- = Forward/Backward),Backward,,,Microns/Seconds +448,,Tail Speed (+/- = Forward/Backward),Backward,Absolute,,Microns/Seconds +449,,Tail Speed (+/- = Forward/Backward),Backward,Positive,,Microns/Seconds +450,,Tail Speed (+/- = Forward/Backward),Backward,Negative,,Microns/Seconds +451,,Tail Tip Speed (+/- = Forward/Backward),,,,Microns/Seconds +452,,Tail Tip Speed (+/- = Forward/Backward),,Absolute,,Microns/Seconds +453,,Tail Tip Speed (+/- = Forward/Backward),,Positive,,Microns/Seconds +454,,Tail Tip Speed (+/- = Forward/Backward),,Negative,,Microns/Seconds +455,,Tail Tip Speed (+/- = Forward/Backward),Forward,,,Microns/Seconds +456,,Tail Tip Speed (+/- = Forward/Backward),Forward,Absolute,,Microns/Seconds +457,,Tail Tip Speed (+/- = Forward/Backward),Forward,Positive,,Microns/Seconds +458,,Tail Tip Speed (+/- = Forward/Backward),Forward,Negative,,Microns/Seconds +459,,Tail Tip Speed (+/- = Forward/Backward),Paused,,,Microns/Seconds +460,,Tail Tip Speed (+/- = Forward/Backward),Paused,Absolute,,Microns/Seconds +461,,Tail Tip Speed (+/- = Forward/Backward),Paused,Positive,,Microns/Seconds +462,,Tail Tip Speed (+/- = Forward/Backward),Paused,Negative,,Microns/Seconds +463,,Tail Tip Speed (+/- = Forward/Backward),Backward,,,Microns/Seconds +464,,Tail Tip Speed (+/- = Forward/Backward),Backward,Absolute,,Microns/Seconds +465,,Tail Tip Speed (+/- = Forward/Backward),Backward,Positive,,Microns/Seconds +466,,Tail Tip Speed (+/- = Forward/Backward),Backward,Negative,,Microns/Seconds +467,,Head Tip Motion Direction (+/- = Toward D/V),,,,Degrees/Seconds +468,,Head Tip Motion Direction (+/- = Toward D/V),,Absolute,,Degrees/Seconds +469,,Head Tip Motion Direction (+/- = Toward D/V),,Positive,,Degrees/Seconds +470,,Head Tip Motion Direction (+/- = Toward D/V),,Negative,,Degrees/Seconds +471,,Head Tip Motion Direction (+/- = Toward D/V),Forward,,,Degrees/Seconds +472,,Head Tip Motion Direction (+/- = Toward D/V),Forward,Absolute,,Degrees/Seconds +473,,Head Tip Motion Direction (+/- = Toward D/V),Forward,Positive,,Degrees/Seconds +474,,Head Tip Motion Direction (+/- = Toward D/V),Forward,Negative,,Degrees/Seconds +475,,Head Tip Motion Direction (+/- = Toward D/V),Paused,,,Degrees/Seconds +476,,Head Tip Motion Direction (+/- = Toward D/V),Paused,Absolute,,Degrees/Seconds +477,,Head Tip Motion Direction (+/- = Toward D/V),Paused,Positive,,Degrees/Seconds +478,,Head Tip Motion Direction (+/- = Toward D/V),Paused,Negative,,Degrees/Seconds +479,,Head Tip Motion Direction (+/- = Toward D/V),Backward,,,Degrees/Seconds +480,,Head Tip Motion Direction (+/- = Toward D/V),Backward,Absolute,,Degrees/Seconds +481,,Head Tip Motion Direction (+/- = Toward D/V),Backward,Positive,,Degrees/Seconds +482,,Head Tip Motion Direction (+/- = Toward D/V),Backward,Negative,,Degrees/Seconds +483,,Head Motion Direction (+/- = Toward D/V),,,,Degrees/Seconds +484,,Head Motion Direction (+/- = Toward D/V),,Absolute,,Degrees/Seconds +485,,Head Motion Direction (+/- = Toward D/V),,Positive,,Degrees/Seconds +486,,Head Motion Direction (+/- = Toward D/V),,Negative,,Degrees/Seconds +487,,Head Motion Direction (+/- = Toward D/V),Forward,,,Degrees/Seconds +488,,Head Motion Direction (+/- = Toward D/V),Forward,Absolute,,Degrees/Seconds +489,,Head Motion Direction (+/- = Toward D/V),Forward,Positive,,Degrees/Seconds +490,,Head Motion Direction (+/- = Toward D/V),Forward,Negative,,Degrees/Seconds +491,,Head Motion Direction (+/- = Toward D/V),Paused,,,Degrees/Seconds +492,,Head Motion Direction (+/- = Toward D/V),Paused,Absolute,,Degrees/Seconds +493,,Head Motion Direction (+/- = Toward D/V),Paused,Positive,,Degrees/Seconds +494,,Head Motion Direction (+/- = Toward D/V),Paused,Negative,,Degrees/Seconds +495,,Head Motion Direction (+/- = Toward D/V),Backward,,,Degrees/Seconds +496,,Head Motion Direction (+/- = Toward D/V),Backward,Absolute,,Degrees/Seconds +497,,Head Motion Direction (+/- = Toward D/V),Backward,Positive,,Degrees/Seconds +498,,Head Motion Direction (+/- = Toward D/V),Backward,Negative,,Degrees/Seconds +499,,Midbody Motion Direction (+/- = Toward D/V),,,,Degrees/Seconds +500,,Midbody Motion Direction (+/- = Toward D/V),,Absolute,,Degrees/Seconds +501,,Midbody Motion Direction (+/- = Toward D/V),,Positive,,Degrees/Seconds +502,,Midbody Motion Direction (+/- = Toward D/V),,Negative,,Degrees/Seconds +503,,Midbody Motion Direction (+/- = Toward D/V),Forward,,,Degrees/Seconds +504,,Midbody Motion Direction (+/- = Toward D/V),Forward,Absolute,,Degrees/Seconds +505,,Midbody Motion Direction (+/- = Toward D/V),Forward,Positive,,Degrees/Seconds +506,,Midbody Motion Direction (+/- = Toward D/V),Forward,Negative,,Degrees/Seconds +507,,Midbody Motion Direction (+/- = Toward D/V),Paused,,,Degrees/Seconds +508,,Midbody Motion Direction (+/- = Toward D/V),Paused,Absolute,,Degrees/Seconds +509,,Midbody Motion Direction (+/- = Toward D/V),Paused,Positive,,Degrees/Seconds +510,,Midbody Motion Direction (+/- = Toward D/V),Paused,Negative,,Degrees/Seconds +511,,Midbody Motion Direction (+/- = Toward D/V),Backward,,,Degrees/Seconds +512,,Midbody Motion Direction (+/- = Toward D/V),Backward,Absolute,,Degrees/Seconds +513,,Midbody Motion Direction (+/- = Toward D/V),Backward,Positive,,Degrees/Seconds +514,,Midbody Motion Direction (+/- = Toward D/V),Backward,Negative,,Degrees/Seconds +515,,Tail Motion Direction (+/- = Toward D/V),,,,Degrees/Seconds +516,,Tail Motion Direction (+/- = Toward D/V),,Absolute,,Degrees/Seconds +517,,Tail Motion Direction (+/- = Toward D/V),,Positive,,Degrees/Seconds +518,,Tail Motion Direction (+/- = Toward D/V),,Negative,,Degrees/Seconds +519,,Tail Motion Direction (+/- = Toward D/V),Forward,,,Degrees/Seconds +520,,Tail Motion Direction (+/- = Toward D/V),Forward,Absolute,,Degrees/Seconds +521,,Tail Motion Direction (+/- = Toward D/V),Forward,Positive,,Degrees/Seconds +522,,Tail Motion Direction (+/- = Toward D/V),Forward,Negative,,Degrees/Seconds +523,,Tail Motion Direction (+/- = Toward D/V),Paused,,,Degrees/Seconds +524,,Tail Motion Direction (+/- = Toward D/V),Paused,Absolute,,Degrees/Seconds +525,,Tail Motion Direction (+/- = Toward D/V),Paused,Positive,,Degrees/Seconds +526,,Tail Motion Direction (+/- = Toward D/V),Paused,Negative,,Degrees/Seconds +527,,Tail Motion Direction (+/- = Toward D/V),Backward,,,Degrees/Seconds +528,,Tail Motion Direction (+/- = Toward D/V),Backward,Absolute,,Degrees/Seconds +529,,Tail Motion Direction (+/- = Toward D/V),Backward,Positive,,Degrees/Seconds +530,,Tail Motion Direction (+/- = Toward D/V),Backward,Negative,,Degrees/Seconds +531,,Tail Tip Motion Direction (+/- = Toward D/V),,,,Degrees/Seconds +532,,Tail Tip Motion Direction (+/- = Toward D/V),,Absolute,,Degrees/Seconds +533,,Tail Tip Motion Direction (+/- = Toward D/V),,Positive,,Degrees/Seconds +534,,Tail Tip Motion Direction (+/- = Toward D/V),,Negative,,Degrees/Seconds +535,,Tail Tip Motion Direction (+/- = Toward D/V),Forward,,,Degrees/Seconds +536,,Tail Tip Motion Direction (+/- = Toward D/V),Forward,Absolute,,Degrees/Seconds +537,,Tail Tip Motion Direction (+/- = Toward D/V),Forward,Positive,,Degrees/Seconds +538,,Tail Tip Motion Direction (+/- = Toward D/V),Forward,Negative,,Degrees/Seconds +539,,Tail Tip Motion Direction (+/- = Toward D/V),Paused,,,Degrees/Seconds +540,,Tail Tip Motion Direction (+/- = Toward D/V),Paused,Absolute,,Degrees/Seconds +541,,Tail Tip Motion Direction (+/- = Toward D/V),Paused,Positive,,Degrees/Seconds +542,,Tail Tip Motion Direction (+/- = Toward D/V),Paused,Negative,,Degrees/Seconds +543,,Tail Tip Motion Direction (+/- = Toward D/V),Backward,,,Degrees/Seconds +544,,Tail Tip Motion Direction (+/- = Toward D/V),Backward,Absolute,,Degrees/Seconds +545,,Tail Tip Motion Direction (+/- = Toward D/V),Backward,Positive,,Degrees/Seconds +546,,Tail Tip Motion Direction (+/- = Toward D/V),Backward,Negative,,Degrees/Seconds +547,,Foraging Amplitude (+/- = Toward D/V),,,,Microns +548,,Foraging Amplitude (+/- = Toward D/V),,Absolute,,Microns +549,,Foraging Amplitude (+/- = Toward D/V),,Positive,,Microns +550,,Foraging Amplitude (+/- = Toward D/V),,Negative,,Microns +551,,Foraging Amplitude (+/- = Toward D/V),Forward,,,Microns +552,,Foraging Amplitude (+/- = Toward D/V),Forward,Absolute,,Microns +553,,Foraging Amplitude (+/- = Toward D/V),Forward,Positive,,Microns +554,,Foraging Amplitude (+/- = Toward D/V),Forward,Negative,,Microns +555,,Foraging Amplitude (+/- = Toward D/V),Paused,,,Microns +556,,Foraging Amplitude (+/- = Toward D/V),Paused,Absolute,,Microns +557,,Foraging Amplitude (+/- = Toward D/V),Paused,Positive,,Microns +558,,Foraging Amplitude (+/- = Toward D/V),Paused,Negative,,Microns +559,,Foraging Amplitude (+/- = Toward D/V),Backward,,,Microns +560,,Foraging Amplitude (+/- = Toward D/V),Backward,Absolute,,Microns +561,,Foraging Amplitude (+/- = Toward D/V),Backward,Positive,,Microns +562,,Foraging Amplitude (+/- = Toward D/V),Backward,Negative,,Microns +563,,Head Crawling Amplitude (+/- = D/V Inside),,,,Degrees +564,,Head Crawling Amplitude (+/- = D/V Inside),,Absolute,,Degrees +565,,Head Crawling Amplitude (+/- = D/V Inside),,Positive,,Degrees +566,,Head Crawling Amplitude (+/- = D/V Inside),,Negative,,Degrees +567,,Head Crawling Amplitude (+/- = D/V Inside),Forward,,,Degrees +568,,Head Crawling Amplitude (+/- = D/V Inside),Forward,Absolute,,Degrees +569,,Head Crawling Amplitude (+/- = D/V Inside),Forward,Positive,,Degrees +570,,Head Crawling Amplitude (+/- = D/V Inside),Forward,Negative,,Degrees +571,,Head Crawling Amplitude (+/- = D/V Inside),Backward,,,Degrees +572,,Head Crawling Amplitude (+/- = D/V Inside),Backward,Absolute,,Degrees +573,,Head Crawling Amplitude (+/- = D/V Inside),Backward,Positive,,Degrees +574,,Head Crawling Amplitude (+/- = D/V Inside),Backward,Negative,,Degrees +575,,Midbody Crawling Amplitude (+/- = D/V Inside),,,,Degrees +576,,Midbody Crawling Amplitude (+/- = D/V Inside),,Absolute,,Degrees +577,,Midbody Crawling Amplitude (+/- = D/V Inside),,Positive,,Degrees +578,,Midbody Crawling Amplitude (+/- = D/V Inside),,Negative,,Degrees +579,,Midbody Crawling Amplitude (+/- = D/V Inside),Forward,,,Degrees +580,,Midbody Crawling Amplitude (+/- = D/V Inside),Forward,Absolute,,Degrees +581,,Midbody Crawling Amplitude (+/- = D/V Inside),Forward,Positive,,Degrees +582,,Midbody Crawling Amplitude (+/- = D/V Inside),Forward,Negative,,Degrees +583,,Midbody Crawling Amplitude (+/- = D/V Inside),Backward,,,Degrees +584,,Midbody Crawling Amplitude (+/- = D/V Inside),Backward,Absolute,,Degrees +585,,Midbody Crawling Amplitude (+/- = D/V Inside),Backward,Positive,,Degrees +586,,Midbody Crawling Amplitude (+/- = D/V Inside),Backward,Negative,,Degrees +587,,Tail Crawling Amplitude (+/- = D/V Inside),,,,Degrees +588,,Tail Crawling Amplitude (+/- = D/V Inside),,Absolute,,Degrees +589,,Tail Crawling Amplitude (+/- = D/V Inside),,Positive,,Degrees +590,,Tail Crawling Amplitude (+/- = D/V Inside),,Negative,,Degrees +591,,Tail Crawling Amplitude (+/- = D/V Inside),Forward,,,Degrees +592,,Tail Crawling Amplitude (+/- = D/V Inside),Forward,Absolute,,Degrees +593,,Tail Crawling Amplitude (+/- = D/V Inside),Forward,Positive,,Degrees +594,,Tail Crawling Amplitude (+/- = D/V Inside),Forward,Negative,,Degrees +595,,Tail Crawling Amplitude (+/- = D/V Inside),Backward,,,Degrees +596,,Tail Crawling Amplitude (+/- = D/V Inside),Backward,Absolute,,Degrees +597,,Tail Crawling Amplitude (+/- = D/V Inside),Backward,Positive,,Degrees +598,,Tail Crawling Amplitude (+/- = D/V Inside),Backward,Negative,,Degrees +599,,Foraging Speed,,,,Degrees/Seconds +600,,Foraging Speed,,Absolute,,Degrees/Seconds +601,,Foraging Speed,,Positive,,Degrees/Seconds +602,,Foraging Speed,,Negative,,Degrees/Seconds +603,,Foraging Speed,Forward,,,Degrees/Seconds +604,,Foraging Speed,Forward,Absolute,,Degrees/Seconds +605,,Foraging Speed,Forward,Positive,,Degrees/Seconds +606,,Foraging Speed,Forward,Negative,,Degrees/Seconds +607,,Foraging Speed,Paused,,,Degrees/Seconds +608,,Foraging Speed,Paused,Absolute,,Degrees/Seconds +609,,Foraging Speed,Paused,Positive,,Degrees/Seconds +610,,Foraging Speed,Paused,Negative,,Degrees/Seconds +611,,Foraging Speed,Backward,,,Degrees/Seconds +612,,Foraging Speed,Backward,Absolute,,Degrees/Seconds +613,,Foraging Speed,Backward,Positive,,Degrees/Seconds +614,,Foraging Speed,Backward,Negative,,Degrees/Seconds +615,,Head Crawling Frequency (+/- = D/V Inside),,,,Hz +616,,Head Crawling Frequency (+/- = D/V Inside),,Absolute,,Hz +617,,Head Crawling Frequency (+/- = D/V Inside),,Positive,,Hz +618,,Head Crawling Frequency (+/- = D/V Inside),,Negative,,Hz +619,,Head Crawling Frequency (+/- = D/V Inside),Forward,,,Hz +620,,Head Crawling Frequency (+/- = D/V Inside),Forward,Absolute,,Hz +621,,Head Crawling Frequency (+/- = D/V Inside),Forward,Positive,,Hz +622,,Head Crawling Frequency (+/- = D/V Inside),Forward,Negative,,Hz +623,,Head Crawling Frequency (+/- = D/V Inside),Backward,,,Hz +624,,Head Crawling Frequency (+/- = D/V Inside),Backward,Absolute,,Hz +625,,Head Crawling Frequency (+/- = D/V Inside),Backward,Positive,,Hz +626,,Head Crawling Frequency (+/- = D/V Inside),Backward,Negative,,Hz +627,,Midbody Crawling Frequency (+/- = D/V Inside),,,,Hz +628,,Midbody Crawling Frequency (+/- = D/V Inside),,Absolute,,Hz +629,,Midbody Crawling Frequency (+/- = D/V Inside),,Positive,,Hz +630,,Midbody Crawling Frequency (+/- = D/V Inside),,Negative,,Hz +631,,Midbody Crawling Frequency (+/- = D/V Inside),Forward,,,Hz +632,,Midbody Crawling Frequency (+/- = D/V Inside),Forward,Absolute,,Hz +633,,Midbody Crawling Frequency (+/- = D/V Inside),Forward,Positive,,Hz +634,,Midbody Crawling Frequency (+/- = D/V Inside),Forward,Negative,,Hz +635,,Midbody Crawling Frequency (+/- = D/V Inside),Backward,,,Hz +636,,Midbody Crawling Frequency (+/- = D/V Inside),Backward,Absolute,,Hz +637,,Midbody Crawling Frequency (+/- = D/V Inside),Backward,Positive,,Hz +638,,Midbody Crawling Frequency (+/- = D/V Inside),Backward,Negative,,Hz +639,,Tail Crawling Frequency (+/- = D/V Inside),,,,Hz +640,,Tail Crawling Frequency (+/- = D/V Inside),,Absolute,,Hz +641,,Tail Crawling Frequency (+/- = D/V Inside),,Positive,,Hz +642,,Tail Crawling Frequency (+/- = D/V Inside),,Negative,,Hz +643,,Tail Crawling Frequency (+/- = D/V Inside),Forward,,,Hz +644,,Tail Crawling Frequency (+/- = D/V Inside),Forward,Absolute,,Hz +645,,Tail Crawling Frequency (+/- = D/V Inside),Forward,Positive,,Hz +646,,Tail Crawling Frequency (+/- = D/V Inside),Forward,Negative,,Hz +647,,Tail Crawling Frequency (+/- = D/V Inside),Backward,,,Hz +648,,Tail Crawling Frequency (+/- = D/V Inside),Backward,Absolute,,Hz +649,,Tail Crawling Frequency (+/- = D/V Inside),Backward,Positive,,Hz +650,,Tail Crawling Frequency (+/- = D/V Inside),Backward,Negative,,Hz +651,,Omega Turn Events,Frequency,,,Hz +652,,Omega Turn Events,Time Ratio,,,No Units +653,,Omega Turn Events,Time,,,Seconds +654,,Omega Turn Events,Time,Absolute,,Seconds +655,,Omega Turn Events,Time,Positive,,Seconds +656,,Omega Turn Events,Time,Negative,,Seconds +657,,Omega Turn Events,Inter Time,,,Seconds +658,,Omega Turn Events,Inter Time,Absolute,,Seconds +659,,Omega Turn Events,Inter Time,Positive,,Seconds +660,,Omega Turn Events,Inter Time,Negative,,Seconds +661,,Omega Turn Events,Inter Distance,,,Microns +662,,Omega Turn Events,Inter Distance,Absolute,,Microns +663,,Omega Turn Events,Inter Distance,Positive,,Microns +664,,Omega Turn Events,Inter Distance,Negative,,Microns +665,,Upsilon Turn Events,Frequency,,,Hz +666,,Upsilon Turn Events,Time Ratio,,,No Units +667,,Upsilon Turn Events,Time,,,Seconds +668,,Upsilon Turn Events,Time,Absolute,,Seconds +669,,Upsilon Turn Events,Time,Positive,,Seconds +670,,Upsilon Turn Events,Time,Negative,,Seconds +671,,Upsilon Turn Events,Inter Time,,,Seconds +672,,Upsilon Turn Events,Inter Time,Absolute,,Seconds +673,,Upsilon Turn Events,Inter Time,Positive,,Seconds +674,,Upsilon Turn Events,Inter Time,Negative,,Seconds +675,,Upsilon Turn Events,Inter Distance,,,Microns +676,,Upsilon Turn Events,Inter Distance,Absolute,,Microns +677,,Upsilon Turn Events,Inter Distance,Positive,,Microns +678,,Upsilon Turn Events,Inter Distance,Negative,,Microns +679,,Path Range,,,,Microns +680,,Path Range,Forward,,,Microns +681,,Path Range,Paused,,,Microns +682,,Path Range,Backward,,,Microns +683,,Worm Dwelling,,,,Seconds +684,,Head Dwelling,,,,Seconds +685,,Midbody Dwelling,,,,Seconds +686,,Tail Dwelling,,,,Seconds +687,,Path Curvature (+/- = D/V Inside),,,,Radians/Microns +688,,Path Curvature (+/- = D/V Inside),,Absolute,,Radians/Microns +689,,Path Curvature (+/- = D/V Inside),,Positive,,Radians/Microns +690,,Path Curvature (+/- = D/V Inside),,Negative,,Radians/Microns +691,,Path Curvature (+/- = D/V Inside),Forward,,,Radians/Microns +692,,Path Curvature (+/- = D/V Inside),Forward,Absolute,,Radians/Microns +693,,Path Curvature (+/- = D/V Inside),Forward,Positive,,Radians/Microns +694,,Path Curvature (+/- = D/V Inside),Forward,Negative,,Radians/Microns +695,,Path Curvature (+/- = D/V Inside),Paused,,,Radians/Microns +696,,Path Curvature (+/- = D/V Inside),Paused,Absolute,,Radians/Microns +697,,Path Curvature (+/- = D/V Inside),Paused,Positive,,Radians/Microns +698,,Path Curvature (+/- = D/V Inside),Paused,Negative,,Radians/Microns +699,,Path Curvature (+/- = D/V Inside),Backward,,,Radians/Microns +700,,Path Curvature (+/- = D/V Inside),Backward,Absolute,,Radians/Microns +701,,Path Curvature (+/- = D/V Inside),Backward,Positive,,Radians/Microns +702,,Path Curvature (+/- = D/V Inside),Backward,Negative,,Radians/Microns From ba405a89cd2f34ac19530a459cccc275376c431e Mon Sep 17 00:00:00 2001 From: Jim Hokanson Date: Sun, 15 Sep 2013 17:23:46 -0400 Subject: [PATCH 3/4] Update features.md Added csv link --- Movement/features.md | 2 ++ 1 file changed, 2 insertions(+) diff --git a/Movement/features.md b/Movement/features.md index bc7e3bb7..cbd7734b 100644 --- a/Movement/features.md +++ b/Movement/features.md @@ -4,6 +4,8 @@ One source for features is listed at: http://www.nature.com/nmeth/journal/v10/n9/extref/nmeth.2560-S3.xlsx +A csv copy is availabe [here](features/nmeth.2560-S3.csv) + NOTE: We are currently going through the information from Yemini et al and compiling the lists seen below. ## TODOS ## From c7f1e53c73fa7a47a871b9e2361716c07051dbf4 Mon Sep 17 00:00:00 2001 From: Jim Hokanson Date: Wed, 25 Sep 2013 21:55:18 -0400 Subject: [PATCH 4/4] Added a bit more to repo to indicate layout I had in mind --- GitAndGitHub.md | 5 +++++ Movement/ReadMe.md | 13 +++++++++++-- .../ProgressReport_2013_09_04.md | 0 README.md | 16 ++++++++++------ SubProjects.md | 12 ++++++++++++ 5 files changed, 38 insertions(+), 8 deletions(-) create mode 100644 GitAndGitHub.md rename {Movement/Data/MRC_HDF5/progress => Projects/MovementValidation}/ProgressReport_2013_09_04.md (100%) create mode 100644 SubProjects.md diff --git a/GitAndGitHub.md b/GitAndGitHub.md new file mode 100644 index 00000000..a73e6981 --- /dev/null +++ b/GitAndGitHub.md @@ -0,0 +1,5 @@ +## Git & Github: Tips & Notes ## + +This page is meant to be a place to put things related to working with Git and GitHub + +https://help.github.com/articles/github-flavored-markdown \ No newline at end of file diff --git a/Movement/ReadMe.md b/Movement/ReadMe.md index b1e7830d..6351a76e 100644 --- a/Movement/ReadMe.md +++ b/Movement/ReadMe.md @@ -1,3 +1,12 @@ -This folder and subfolders are meant to document aspects of the project which are related to movement. +This folder and subfolders are meant to document aspects of the project which are related to **worm movement**. -[features](features.md) - A description of features, such as time spent not moving, that can be used to compare the behavior of different worms. +**[data sources](Data/MRC_HDF5.md)** - A description of movement data that we have access to + +**[features](features.md)** - A description of features, such as time spent not moving, that can be used to compare the behavior of different worms. + + +**Other possible topics:** +- Groups studying movement +- worm movement data +- worm movement explained +- papers on worm movement diff --git a/Movement/Data/MRC_HDF5/progress/ProgressReport_2013_09_04.md b/Projects/MovementValidation/ProgressReport_2013_09_04.md similarity index 100% rename from Movement/Data/MRC_HDF5/progress/ProgressReport_2013_09_04.md rename to Projects/MovementValidation/ProgressReport_2013_09_04.md diff --git a/README.md b/README.md index 5ac377b4..bd0f8a32 100644 --- a/README.md +++ b/README.md @@ -1,7 +1,11 @@ -## Movement ## +## Introduction ## -These are a list of things to start documenting/writing about: -- Groups studying movement -- worm movement data -- worm movement explained -- papers on worm movement \ No newline at end of file +This repository is meant to be a place where we can place or link to documentation. If you have any suggestions or would like to contribute, feel free to fork the repository (TODO: Provide link to Git Policies). + +[Link to Wiki](https://github.com/openworm/OpenWorm/wiki) + +**Topics** +- [Movement](Movement/ReadMe.md) - things related to worm movement +- [Sub Project List](SubProjects.md) - summary of sub-projects +- Git Policies +- [Git & GitHub](GitAndGitHub.md) diff --git a/SubProjects.md b/SubProjects.md new file mode 100644 index 00000000..320fba3b --- /dev/null +++ b/SubProjects.md @@ -0,0 +1,12 @@ + +http://www.openworm.org/projects.html + +## Movement Validation ## +The goal of this sub-project is to try and validate the modeled worm movement by comparing it to real worm behavior. + +**Relevant Repositories** +- [SegWorm](https://github.com/openworm/SegWorm) - This repo extracts worm information from a video. This repository is not currently undergoing much development. Any questions on it can be directed to @JimHokanson +- [Movement Validation](https://github.com/MichaelCurrie/movement_validation) - This repo has been started for the explicit purpose of trying to match simulation results with the movement of real worms. It is currently very much a work in progress! + +**Progress Reports** +- [2013-09-04](Projects/MovementValidation/ProgressReport_2013_09_04.md) \ No newline at end of file