{"payload":{"pageCount":1,"repositories":[{"type":"Public","name":"bcio-articles","owner":"BrainCircuitsIO","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"JavaScript","color":"#f1e05a"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-01-05T12:06:32.863Z"}},{"type":"Public","name":"neuroglancer","owner":"BrainCircuitsIO","isFork":true,"description":"WebGL-based viewer for volumetric data","allTopics":[],"primaryLanguage":{"name":"TypeScript","color":"#3178c6"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":283,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-12-01T19:03:08.992Z"}},{"type":"Public","name":"navis","owner":"BrainCircuitsIO","isFork":true,"description":"Python library for analysis of neuroanatomical data.","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":30,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-10-16T09:31:46.718Z"}},{"type":"Public","name":"bcio-discussion","owner":"BrainCircuitsIO","isFork":false,"description":"Discussion about regions, cell types, papers etc.","allTopics":[],"primaryLanguage":null,"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-05-31T08:30:53.291Z"}},{"type":"Public","name":"workspace","owner":"BrainCircuitsIO","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-05-23T16:14:41.640Z"}},{"type":"Public","name":"pytorch-3dunet","owner":"BrainCircuitsIO","isFork":true,"description":"3D U-Net model for volumetric semantic segmentation written in pytorch","allTopics":[],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":483,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-05-11T14:01:16.150Z"}},{"type":"Public","name":"napari","owner":"BrainCircuitsIO","isFork":true,"description":"napari: a fast, interactive, multi-dimensional image viewer for python","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":417,"license":"BSD 3-Clause \"New\" or \"Revised\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-05-11T12:33:33.244Z"}},{"type":"Public","name":"connectomics-vis-survey.github.io","owner":"BrainCircuitsIO","isFork":true,"description":"Resources for the EuroVis 2022 survey paper on Visualization and Analysis in High-Resolutiuon Connectomics","allTopics":[],"primaryLanguage":{"name":"JavaScript","color":"#f1e05a"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":2,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-06-08T14:56:22.613Z"}},{"type":"Public","name":"neuroglancer-json-schemas","owner":"BrainCircuitsIO","isFork":true,"description":"JSON Schemas for neuroglancer data structures","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":1,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-02-16T17:23:04.706Z"}},{"type":"Public","name":"react-neuroglancer","owner":"BrainCircuitsIO","isFork":true,"description":"React component wrapper for neuroglancer","allTopics":[],"primaryLanguage":{"name":"JavaScript","color":"#f1e05a"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":3,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2021-06-18T14:54:52.297Z"}},{"type":"Public","name":"AnnotationFrameworkClient","owner":"BrainCircuitsIO","isFork":true,"description":"","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":12,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2021-03-12T17:19:30.605Z"}},{"type":"Public","name":"OFS-EM-Connectomics","owner":"BrainCircuitsIO","isFork":true,"description":"Code and data for the 2021 Open for Science tutorial for EM connectomics.","allTopics":[],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":3,"license":"Other","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2021-03-10T18:23:23.364Z"}},{"type":"Public","name":"circuitmap","owner":"BrainCircuitsIO","isFork":false,"description":"Django application serving data for synapse-guided circuit mapping in CATMAID","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":1,"starsCount":3,"forksCount":2,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2020-04-09T20:44:29.574Z"}},{"type":"Public","name":"CATMAID","owner":"BrainCircuitsIO","isFork":true,"description":"Collaborative Annotation Toolkit for Massive Amounts of Image Data","allTopics":[],"primaryLanguage":{"name":"JavaScript","color":"#f1e05a"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":56,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2019-10-29T06:51:44.862Z"}},{"type":"Public","name":"pymaid","owner":"BrainCircuitsIO","isFork":true,"description":"Collection of Python 3 tools to work with neuron data from CATMAID servers","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":11,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2019-10-09T17:19:30.431Z"}},{"type":"Public","name":"fafbseg-py","owner":"BrainCircuitsIO","isFork":true,"description":"Tools to work with manual and auto-segmented data in FAFB","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":5,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2019-10-07T17:38:57.807Z"}},{"type":"Public","name":"CloudVolumeServer","owner":"BrainCircuitsIO","isFork":true,"description":"Flask application to serve data via CloudVolume ","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":3,"license":"BSD 2-Clause \"Simplified\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2019-10-02T08:14:30.607Z"}},{"type":"Public","name":"catpy","owner":"BrainCircuitsIO","isFork":true,"description":"Python client for the CATMAID API","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":2,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2019-09-23T20:50:37.007Z"}},{"type":"Public","name":"arbor","owner":"BrainCircuitsIO","isFork":true,"description":"A python implementation of (some of) Arbor.js and related tools","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":1,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2018-12-02T17:34:43.601Z"}},{"type":"Public","name":"catalysis","owner":"BrainCircuitsIO","isFork":true,"description":"Python tools for interacting with CATMAID","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":3,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2018-10-18T18:08:25.144Z"}}],"repositoryCount":20,"userInfo":null,"searchable":true,"definitions":[],"typeFilters":[{"id":"all","text":"All"},{"id":"public","text":"Public"},{"id":"source","text":"Sources"},{"id":"fork","text":"Forks"},{"id":"archived","text":"Archived"},{"id":"template","text":"Templates"}],"compactMode":false},"title":"BrainCircuitsIO repositories"}