{"payload":{"pageCount":1,"repositories":[{"type":"Public","name":"fibsem","owner":"DeMarcoLab","isFork":false,"description":"A universal API for FIBSEM control","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":4,"issueCount":22,"starsCount":26,"forksCount":10,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-06-21T11:49:16.335Z"}},{"type":"Public","name":"autolamella","owner":"DeMarcoLab","isFork":false,"description":"autolamella is a python package for automated cryo-lamella preparation with focused ion beam milling.","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":1,"issueCount":3,"starsCount":19,"forksCount":14,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-06-14T14:49:09.872Z"}},{"type":"Public","name":"openfibsem-docs","owner":"DeMarcoLab","isFork":false,"description":"Documentation site for the OpenFIBSEM project","allTopics":[],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-06-14T02:05:47.730Z"}},{"type":"Public","name":"juno","owner":"DeMarcoLab","isFork":false,"description":"juno is a simulation package for optical system design using full wave propagation.","allTopics":[],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":1,"issueCount":20,"starsCount":53,"forksCount":1,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-02-22T08:20:58.370Z"}},{"type":"Public","name":"napari-openfibsem","owner":"DeMarcoLab","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":2,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-02-01T10:49:03.786Z"}},{"type":"Public","name":"salami","owner":"DeMarcoLab","isFork":false,"description":"salami is a python package for volume electron microscopy","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":5,"starsCount":3,"forksCount":1,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-10-18T23:56:01.803Z"}},{"type":"Public","name":"openCLEM","owner":"DeMarcoLab","isFork":false,"description":"A universal API for Light Microscopy","allTopics":[],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":20,"starsCount":1,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-10-18T23:52:18.596Z"}},{"type":"Public","name":"bandpass-filter-gui","owner":"DeMarcoLab","isFork":false,"description":"A simple GUI to visualize bandpass filtering with different parameters.","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-09-10T02:48:05.390Z"}},{"type":"Public","name":"imp_preprocessing_pipelines","owner":"DeMarcoLab","isFork":false,"description":"Pipelines to create neuroglancer formats from EM data, along with segmentations or object lists. Raw output can be used in neuroglancer, or used in IMP project to have an interactive app.","allTopics":["cryo-em","data-conversion","neuroglancer"],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"Creative Commons Zero v1.0 Universal","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-06-20T06:23:20.737Z"}},{"type":"Public","name":"vulcan","owner":"DeMarcoLab","isFork":false,"description":"grayscale lithography","allTopics":[],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":2,"starsCount":1,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-04-18T05:48:00.598Z"}},{"type":"Public","name":"piescope","owner":"DeMarcoLab","isFork":false,"description":"Back end library for PIE-scope integrated cryo-correlative light and FIB/SEM microscopy","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":13,"issueCount":0,"starsCount":3,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-02-11T01:03:39.534Z"}},{"type":"Public","name":"IMP","owner":"DeMarcoLab","isFork":false,"description":"Integrated Microscopy and Proteomics","allTopics":[],"primaryLanguage":{"name":"TypeScript","color":"#3178c6"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-01-19T03:30:10.453Z"}},{"type":"Public","name":"imagereg","owner":"DeMarcoLab","isFork":false,"description":"GPU accelerated image registration","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":1,"issueCount":0,"starsCount":2,"forksCount":1,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-10-03T02:45:21.776Z"}},{"type":"Public","name":"piescope_gui","owner":"DeMarcoLab","isFork":false,"description":"GUI for DeMarco lab FIB-SEM controls.","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":1,"issueCount":0,"starsCount":7,"forksCount":0,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-09-27T08:08:57.991Z"}},{"type":"Public","name":"correlateim","owner":"DeMarcoLab","isFork":false,"description":"Correlate images using matched control points. Based on https://github.com/adal02/cpselect","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":2,"starsCount":3,"forksCount":4,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2020-10-14T06:46:45.038Z"}},{"type":"Public","name":"hachiko","owner":"DeMarcoLab","isFork":true,"description":"An extremely simple asyncio-compatible wrapper around Watchdog.","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":12,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2020-03-10T22:54:40.767Z"}},{"type":"Public","name":"3DCT","owner":"DeMarcoLab","isFork":true,"description":"This Toolbox is build for 3D correlative microscopy. It helps with 3D to 2D correlation of three dimensional confocal image stacks to two dimensional SEM/FIB dual beam microscope images.","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":2,"forksCount":4,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2019-10-28T06:48:59.259Z"}}],"repositoryCount":17,"userInfo":null,"searchable":true,"definitions":[],"typeFilters":[{"id":"all","text":"All"},{"id":"public","text":"Public"},{"id":"source","text":"Sources"},{"id":"fork","text":"Forks"},{"id":"archived","text":"Archived"},{"id":"template","text":"Templates"}],"compactMode":false},"title":"Repositories"}