{"payload":{"pageCount":2,"repositories":[{"type":"Public","name":"web-prototype","owner":"EBIvariation","isFork":false,"description":"Prototypes for new website components in React","allTopics":[],"primaryLanguage":{"name":"JavaScript","color":"#f1e05a"},"pullRequestCount":1,"issueCount":0,"starsCount":0,"forksCount":3,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-06-26T11:19:28.403Z"}},{"type":"Public","name":"eva-submission","owner":"EBIvariation","isFork":false,"description":"Components that connect and automate main tasks in the EVA submission workflow","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":7,"issueCount":0,"starsCount":1,"forksCount":7,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-06-24T14:58:49.722Z"}},{"type":"Public","name":"eva-submission-ws","owner":"EBIvariation","isFork":false,"description":"Web services for EVA Submissions ","allTopics":[],"primaryLanguage":{"name":"Java","color":"#b07219"},"pullRequestCount":1,"issueCount":0,"starsCount":0,"forksCount":4,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-06-24T10:59:05.500Z"}},{"type":"Public","name":"eva-accession","owner":"EBIvariation","isFork":false,"description":"EVA non-human variant accessioning service","allTopics":[],"primaryLanguage":{"name":"Java","color":"#b07219"},"pullRequestCount":7,"issueCount":0,"starsCount":4,"forksCount":12,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-06-21T10:21:37.295Z"}},{"type":"Public","name":"eva-web","owner":"EBIvariation","isFork":false,"description":"Web front-end for the European Variation Archive","allTopics":[],"primaryLanguage":{"name":"JavaScript","color":"#f1e05a"},"pullRequestCount":1,"issueCount":0,"starsCount":5,"forksCount":10,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-06-20T12:00:19.387Z"}},{"type":"Public","name":"eva-tools","owner":"EBIvariation","isFork":false,"description":"Tools compatible with the infrastructure of the European Variation Archive pipeline","allTopics":[],"primaryLanguage":{"name":"Java","color":"#b07219"},"pullRequestCount":8,"issueCount":0,"starsCount":1,"forksCount":13,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-06-20T10:30:32.447Z"}},{"type":"Public","name":"eva-tasks","owner":"EBIvariation","isFork":false,"description":"Code used to to perform tasks or one of analysis.","allTopics":[],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":3,"issueCount":0,"starsCount":0,"forksCount":6,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-06-19T12:05:07.642Z"}},{"type":"Public","name":"vcf-validator","owner":"EBIvariation","isFork":false,"description":"Validation suite for Variant Call Format (VCF) files, implemented using C++11","allTopics":[],"primaryLanguage":{"name":"C","color":"#555555"},"pullRequestCount":9,"issueCount":7,"starsCount":129,"forksCount":39,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-06-18T17:11:20.425Z"}},{"type":"Public","name":"eva-assembly-ingestion","owner":"EBIvariation","isFork":false,"description":"Automation for ingesting a new assembly for a species","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":4,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-06-17T18:55:12.422Z"}},{"type":"Public","name":"variant-remapping","owner":"EBIvariation","isFork":false,"description":"The pipeline for remapping VCF variants between two arbitrary FASTA assemblies.","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":6,"starsCount":5,"forksCount":7,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-06-17T18:44:29.492Z"}},{"type":"Public","name":"eva-sub-cli","owner":"EBIvariation","isFork":false,"description":"EVA Submission Command Line Interface for Validation","allTopics":[],"primaryLanguage":{"name":"HTML","color":"#e34c26"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":4,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-06-17T16:35:06.915Z"}},{"type":"Public","name":"opentargets-pharmgkb","owner":"EBIvariation","isFork":false,"description":"Pipeline to provide evidence strings for Open Targets from PharmGKB","allTopics":[],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":1,"issueCount":9,"starsCount":1,"forksCount":1,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-06-12T09:22:24.244Z"}},{"type":"Public","name":"CMAT","owner":"EBIvariation","isFork":false,"description":"ClinVar Mapping and Annotation Toolkit","allTopics":[],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":57,"starsCount":17,"forksCount":10,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-06-04T07:46:10.938Z"}},{"type":"Public","name":"eva-seqcol","owner":"EBIvariation","isFork":false,"description":"Java implementation of the sequence collection specification to represent INSDC assemblies","allTopics":[],"primaryLanguage":{"name":"Java","color":"#b07219"},"pullRequestCount":3,"issueCount":10,"starsCount":1,"forksCount":5,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-22T14:23:39.245Z"}},{"type":"Public","name":"eva-common-pyutils","owner":"EBIvariation","isFork":false,"description":"EBI EVA - Common Python Utilities","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":6,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-15T08:29:00.237Z"}},{"type":"Public","name":"accession-commons","owner":"EBIvariation","isFork":false,"description":"Generic library for accessioning any type of object","allTopics":[],"primaryLanguage":{"name":"Java","color":"#b07219"},"pullRequestCount":2,"issueCount":0,"starsCount":0,"forksCount":12,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-14T12:13:03.685Z"}},{"type":"Public","name":"eva-ws","owner":"EBIvariation","isFork":false,"description":"European Variation Archive REST web services API","allTopics":[],"primaryLanguage":{"name":"Java","color":"#b07219"},"pullRequestCount":10,"issueCount":0,"starsCount":6,"forksCount":21,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-04-09T07:07:39.088Z"}},{"type":"Public","name":"contig-alias","owner":"EBIvariation","isFork":false,"description":"Service to provide synonyms of chromosome/contig identifiers","allTopics":[],"primaryLanguage":{"name":"Java","color":"#b07219"},"pullRequestCount":10,"issueCount":10,"starsCount":4,"forksCount":12,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-03-19T15:19:51.248Z"}},{"type":"Public","name":"amp-t2d-property-registry","owner":"EBIvariation","isFork":false,"description":"Registry service for AMP T2D properties","allTopics":[],"primaryLanguage":{"name":"Java","color":"#b07219"},"pullRequestCount":6,"issueCount":0,"starsCount":0,"forksCount":3,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-02-22T00:10:05.642Z"}},{"type":"Public","name":"eva-pipeline","owner":"EBIvariation","isFork":false,"description":"Genomic variation pipeline for the European Variation Archive, implemented using Spring Batch","allTopics":[],"primaryLanguage":{"name":"Java","color":"#b07219"},"pullRequestCount":8,"issueCount":0,"starsCount":5,"forksCount":24,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-02-21T00:05:51.736Z"}},{"type":"Public","name":"amp-t2d-kb-test","owner":"EBIvariation","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Java","color":"#b07219"},"pullRequestCount":2,"issueCount":0,"starsCount":0,"forksCount":2,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-01-22T17:17:38.121Z"}},{"type":"Public","name":"eva-common-groovyutils","owner":"EBIvariation","isFork":false,"description":"EBI EVA - Common Groovy Utilities","allTopics":[],"primaryLanguage":{"name":"Groovy","color":"#4298b8"},"pullRequestCount":1,"issueCount":0,"starsCount":0,"forksCount":1,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-11-04T06:27:50.435Z"}},{"type":"Public","name":"eva-vcf-merge","owner":"EBIvariation","isFork":false,"description":"Tool for merging large sets of VCF files","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":3,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-10-30T15:54:08.008Z"}},{"type":"Public","name":"covid19dp-submission","owner":"EBIvariation","isFork":false,"description":"Covid-19 data portal submissions","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":4,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-10-30T15:26:23.579Z"}},{"type":"Public","name":"variation-commons","owner":"EBIvariation","isFork":false,"description":"Library of core components used by multiple EBI Variation projects","allTopics":[],"primaryLanguage":{"name":"Java","color":"#b07219"},"pullRequestCount":3,"issueCount":0,"starsCount":2,"forksCount":16,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-10-26T14:23:29.066Z"}},{"type":"Public","name":"eva-internal-pyutils","owner":"EBIvariation","isFork":false,"description":"Python utilities used for internal EVA processes","allTopics":[],"primaryLanguage":null,"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":1,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-09-20T17:49:49.707Z"}},{"type":"Public","name":"opencga","owner":"EBIvariation","isFork":true,"description":"An Open Computational Genomics Analysis platform for big data processing and analysis in genomics","allTopics":[],"primaryLanguage":{"name":"Java","color":"#b07219"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":97,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-08-12T14:12:42.084Z"}},{"type":"Public","name":"eva-metrics","owner":"EBIvariation","isFork":false,"description":"Metrics Library for collecting and storing all kinds of metrics from projects and pipelines","allTopics":[],"primaryLanguage":{"name":"Java","color":"#b07219"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":3,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-05-10T10:54:48.956Z"}},{"type":"Public","name":"eva-training","owner":"EBIvariation","isFork":false,"description":"Training materials for the European Variation Archive","allTopics":[],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":2,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-04-11T10:43:20.640Z"}},{"type":"Public","name":"eva-ebi-search-export","owner":"EBIvariation","isFork":false,"description":"Scripts to export EVA data and metadata to EBI search","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":4,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-04-04T15:12:50.345Z"}}],"repositoryCount":48,"userInfo":null,"searchable":true,"definitions":[],"typeFilters":[{"id":"all","text":"All"},{"id":"public","text":"Public"},{"id":"source","text":"Sources"},{"id":"fork","text":"Forks"},{"id":"archived","text":"Archived"},{"id":"template","text":"Templates"}],"compactMode":false},"title":"Repositories"}