mrtrix3 Public

MRtrix3 provides a set of tools to perform various advanced diffusion MRI analyses, including constrained spherical deconvolution (CSD), probabilistic tractography, track-density imaging, and apparent fibre density

MRtrix3.github.io Public

Repository to hold the MRtrix3 website

macos-installer Public

Scripts to create installer for macOS

test_data Public

used to host data for automated testing

conda-build Public

recipe to build anaconda / miniconda MRtrix3 package

script_test_data Public

used to host data for testing of Python scripts

containers Public

Developer tools for generating minified containers for MRtrix3

MinGW Public

developer-documentation Public

Used purely to host MRtrix3's Doxygen-generated development documentation

DICOM_tests Public

scripts to perform DICOM testing for MRtrix3 library

homebrew-mrtrix3 Public

homebrew formula to make installing mrtrix on OSX easier

fetch_changelog Public

Used to automate the creation of a changelog based on merge commits

script_test_action Public

Requisite files for integration of Docker container-based testing of MRtrix3 Python scripts

mrpeek Public

A medical image viewer in the terminal.

MRtrix3_demo_code Public

Demonstration code as included in the MRtrix3 NeuroImage 2019 paper.

cmdline-tutorial Public

Command-line tutorial