{"payload":{"pageCount":2,"repositories":[{"type":"Public","name":"bioconda-recipes","owner":"bio-nim","isFork":true,"description":"Conda recipes for the bioconda channel.","allTopics":[],"primaryLanguage":{"name":"Shell","color":"#89e051"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":3181,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2021-09-22T17:31:11.468Z"}},{"type":"Public","name":"pb-falconc","owner":"bio-nim","isFork":false,"description":"For Bioconda","allTopics":[],"primaryLanguage":{"name":"Nim","color":"#ffc200"},"pullRequestCount":0,"issueCount":1,"starsCount":0,"forksCount":0,"license":"BSD 3-Clause Clear License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2021-07-12T14:57:41.304Z"}},{"type":"Public","name":"test-itree","owner":"bio-nim","isFork":false,"description":"Compare C++ interval-tree implementations","allTopics":[],"primaryLanguage":{"name":"C++","color":"#f34b7d"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2021-04-07T17:03:57.175Z"}},{"type":"Public","name":"pbbam","owner":"bio-nim","isFork":true,"description":"PacBio BAM C++ library","allTopics":[],"primaryLanguage":{"name":"C++","color":"#f34b7d"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":17,"license":"BSD 3-Clause Clear License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2021-02-18T21:42:21.168Z"}},{"type":"Public","name":"threadpools","owner":"bio-nim","isFork":true,"description":"","allTopics":[],"primaryLanguage":{"name":"Nim","color":"#ffc200"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":6,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2020-12-02T17:05:17.010Z"}},{"type":"Public","name":"nim-jellyfish","owner":"bio-nim","isFork":false,"description":"Nim wrapper for Jellyfish","allTopics":[],"primaryLanguage":null,"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"BSD 3-Clause \"New\" or \"Revised\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2020-10-12T14:43:44.809Z"}},{"type":"Public","name":"pb","owner":"bio-nim","isFork":false,"description":"PB utils in Nim","allTopics":[],"primaryLanguage":{"name":"Nim","color":"#ffc200"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"BSD 3-Clause Clear License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2020-10-11T19:28:20.157Z"}},{"type":"Public","name":"nim-edlib","owner":"bio-nim","isFork":false,"description":"Nim wrapper for edlib (Martin Šošić)","allTopics":["bioinformatics"],"primaryLanguage":{"name":"Nim","color":"#ffc200"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"BSD 3-Clause \"New\" or \"Revised\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2020-10-10T03:34:13.108Z"}},{"type":"Public","name":"packages","owner":"bio-nim","isFork":true,"description":"List of packages for Nimble","allTopics":[],"primaryLanguage":{"name":"Nim","color":"#ffc200"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":700,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2020-10-08T22:38:22.948Z"}},{"type":"Public","name":"nim-falcon","owner":"bio-nim","isFork":false,"description":"Nim versions of FALCON executables -- See https://github.com/PacificBiosciences/FALCON","allTopics":[],"primaryLanguage":{"name":"Nim","color":"#ffc200"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":0,"license":"BSD 3-Clause \"New\" or \"Revised\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2020-10-03T14:35:32.289Z"}},{"type":"Public","name":"c2nim","owner":"bio-nim","isFork":true,"description":"c2nim is a tool to translate Ansi C code to Nim. The output is human-readable Nim code that is meant to be tweaked by hand before and after the translation process.","allTopics":[],"primaryLanguage":{"name":"Nim","color":"#ffc200"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":63,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2020-09-25T15:26:33.959Z"}},{"type":"Public","name":"cligen","owner":"bio-nim","isFork":true,"description":"Nim library to infer and generate command-line-interfaces","allTopics":[],"primaryLanguage":{"name":"Nim","color":"#ffc200"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":23,"license":"ISC License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2020-09-22T17:20:02.871Z"}},{"type":"Public","name":"hts-nim","owner":"bio-nim","isFork":true,"description":"nim wrapper for htslib for parsing genomics data files","allTopics":[],"primaryLanguage":{"name":"Nim","color":"#ffc200"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":26,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2020-09-22T12:53:16.162Z"}},{"type":"Public","name":"staged-recipes","owner":"bio-nim","isFork":true,"description":"A place to submit conda recipes before they become fully fledged conda-forge feedstocks","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":4821,"license":"BSD 3-Clause \"New\" or \"Revised\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2019-11-07T22:05:30.895Z"}},{"type":"Public","name":"Nim","owner":"bio-nim","isFork":true,"description":"Nim is a compiled, garbage-collected systems programming language with a design that focuses on efficiency, expressiveness, and elegance (in the order of priority).","allTopics":[],"primaryLanguage":{"name":"Nim","color":"#ffc200"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":1466,"license":"Other","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2019-09-02T18:11:05.317Z"}},{"type":"Public","name":"nim-strfmt","owner":"bio-nim","isFork":false,"description":"Clone of https://bitbucket.org/lyro/strfmt","allTopics":[],"primaryLanguage":{"name":"Nim","color":"#ffc200"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2019-07-25T04:19:06.588Z"}},{"type":"Public","name":"nim-heap","owner":"bio-nim","isFork":true,"description":"Simple binary heap implementation in Nim","allTopics":[],"primaryLanguage":{"name":"Nim","color":"#ffc200"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":4,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2019-05-24T03:13:16.181Z"}},{"type":"Public","name":"nim-networkx","owner":"bio-nim","isFork":false,"description":"[WIP] Nim port of (a subset of) the pure-Python networkx library","allTopics":[],"primaryLanguage":{"name":"Nim","color":"#ffc200"},"pullRequestCount":0,"issueCount":4,"starsCount":8,"forksCount":3,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2019-05-21T20:38:03.014Z"}},{"type":"Public","name":"nim-kmers","owner":"bio-nim","isFork":false,"description":"Library for bioinformatics (kmers, etc.) written in Nim","allTopics":[],"primaryLanguage":{"name":"Nim","color":"#ffc200"},"pullRequestCount":0,"issueCount":0,"starsCount":5,"forksCount":0,"license":"BSD 3-Clause \"New\" or \"Revised\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2019-05-01T17:48:10.548Z"}},{"type":"Public","name":"nim-pbbam","owner":"bio-nim","isFork":false,"description":"Nim wrappers for pbbam","allTopics":[],"primaryLanguage":{"name":"Nim","color":"#ffc200"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2019-04-13T22:49:54.439Z"}},{"type":"Public","name":"msgpack4nim","owner":"bio-nim","isFork":true,"description":" MessagePack serializer/deserializer implementation for Nim / msgpack.org[Nim]","allTopics":[],"primaryLanguage":{"name":"Nim","color":"#ffc200"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":21,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2019-04-06T13:43:26.260Z"}},{"type":"Public","name":"nim-DALIGNER","owner":"bio-nim","isFork":false,"description":"Nim wrapper/translations of PacBio DALIGNER fork -- See https://github.com/PacificBiosciences/DALIGNER","allTopics":[],"primaryLanguage":{"name":"Nim","color":"#ffc200"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"BSD 3-Clause \"New\" or \"Revised\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2019-04-05T17:54:20.207Z"}},{"type":"Public","name":"levenshtein","owner":"bio-nim","isFork":false,"description":"Faster alternative to editDistance in Nim's standard library","allTopics":[],"primaryLanguage":{"name":"Nim","color":"#ffc200"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2019-03-30T16:07:03.506Z"}},{"type":"Public","name":"nim-htslib","owner":"bio-nim","isFork":false,"description":"[WIP] Nim wrapper for htslib","allTopics":[],"primaryLanguage":{"name":"Nim","color":"#ffc200"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"BSD 3-Clause Clear License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2019-02-25T16:25:12.661Z"}},{"type":"Public","name":"htslib","owner":"bio-nim","isFork":true,"description":"C library for high-throughput sequencing data formats","allTopics":[],"primaryLanguage":{"name":"C","color":"#555555"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":446,"license":"Other","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2018-12-05T16:51:29.543Z"}},{"type":"Public","name":"nim-DAZZ_DB","owner":"bio-nim","isFork":false,"description":"OBSOLETE -- Use bio-nim/nim-DALIGNER","allTopics":[],"primaryLanguage":{"name":"Nim","color":"#ffc200"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2018-04-05T16:15:19.406Z"}},{"type":"Public","name":"DALIGNER","owner":"bio-nim","isFork":true,"description":"Find all significant local alignments between reads","allTopics":[],"primaryLanguage":{"name":"C","color":"#555555"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":61,"license":"Other","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2018-04-05T16:13:16.978Z"}},{"type":"Public","name":"DAZZ_DB","owner":"bio-nim","isFork":true,"description":"The Dazzler Data Base","allTopics":[],"primaryLanguage":{"name":"C","color":"#555555"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":33,"license":"Other","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2018-04-05T16:13:09.151Z"}},{"type":"Public","name":"nim-kmer","owner":"bio-nim","isFork":true,"description":"DNA kmer operations for nim","allTopics":[],"primaryLanguage":{"name":"Nim","color":"#ffc200"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":2,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2017-11-17T21:44:47.342Z"}},{"type":"Public","name":"try-workflow","owner":"bio-nim","isFork":false,"description":"[WIP]Test various workflows engines on various systems","allTopics":[],"primaryLanguage":null,"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"BSD 2-Clause \"Simplified\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2017-10-15T16:19:13.020Z"}}],"repositoryCount":38,"userInfo":null,"searchable":true,"definitions":[],"typeFilters":[{"id":"all","text":"All"},{"id":"public","text":"Public"},{"id":"source","text":"Sources"},{"id":"fork","text":"Forks"},{"id":"archived","text":"Archived"},{"id":"template","text":"Templates"}],"compactMode":false},"title":"bio-nim repositories"}