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10 repositories

JPhyloIO
Public
A Java library for event-based reading and writing of different phylogenetic file formats through a common interface
metadata library bioinformatics
metadata library bioinformatics nexus phylogenetics io bioinformatics-data newick phylogenetic-data nexml
Java
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Other
•0•1•0•1•Updated Jul 12, 2025Jul 12, 2025
commons.java
Public
bioinfweb.commons.java - Shared components of bioinfweb projects made available in a Java library
library bioinformatics swing
library bioinformatics swing servlet swt common-library
Java
•
GNU Lesser General Public License v3.0
•0•0•0•1•Updated Jul 12, 2025Jul 12, 2025
TopologicalTreeAnalyzer
Public
Topological Tree Analyzer
Java
•0•0•0•0•Updated May 4, 2021May 4, 2021
TreeGraph2
Public
A feature rich and easy to use phylogenetic tree editor
editor metadata bioinformatics
editor metadata bioinformatics nexus phylogenetics newick-format phylogenetic-tree nexml phyloxml
Java
•
GNU General Public License v3.0
•1•11•0•0•Updated Apr 26, 2021Apr 26, 2021
PhyDE2
Public
An alignment editor for phylogenetic purposes
editor bioinformatics multiple-sequence-alignment
editor bioinformatics multiple-sequence-alignment
Java
•
GNU General Public License v3.0
•0•2•0•0•Updated Feb 5, 2021Feb 5, 2021
LibrAlign
Public
A Java GUI library for displaying and editing multiple sequence alignments and attached raw- and metadata
metadata gui library
metadata gui library bioinformatics swing swt sanger-chromatograms gui-components multiple-sequence-alignment
Java
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Other
•1•0•0•1•Updated Feb 4, 2021Feb 4, 2021
JTreeSS
Public
Reading and interpreting TreeSS styles for phylogenetic trees in Java
library bioinformatics phylogenetic-trees
library bioinformatics phylogenetic-trees style-sheet treess
Java
•0•0•0•0•Updated Sep 20, 2019Sep 20, 2019
TreeSS
Public
Language defintions for TreeSS used by JTreeSS
0•0•0•0•Updated Sep 20, 2019Sep 20, 2019
AlignmentComparator
Public
Visualizing differences between alternative multiple sequence alignments of the same dataset
bioinformatics comparison multiple-sequence-alignment
bioinformatics comparison multiple-sequence-alignment
Java
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GNU General Public License v3.0
•0•1•0•0•Updated Feb 1, 2019Feb 1, 2019
TIC
Public
Toolkit Independent Components (TIC) - A Java library for creating toolkit-independent GUI components compatible with Swing and SWT
gui library swing
gui library swing swt
Java
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Other
•0•0•0•0•Updated Jul 22, 2018Jul 22, 2018

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10 repositories