{"payload":{"pageCount":1,"repositories":[{"type":"Public","name":"genewalk","owner":"churchmanlab","isFork":false,"description":"GeneWalk identifies relevant gene functions for a biological context using network representation learning","allTopics":["functional-genomics","machine-learning-algorithm"],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":127,"forksCount":14,"license":"BSD 2-Clause \"Simplified\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-20T21:51:09.657Z"}},{"type":"Public","name":"mitoRNA_kinetics","owner":"churchmanlab","isFork":false,"description":"Mitochondrial RNA kinetics","allTopics":[],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"BSD 2-Clause \"Simplified\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-01-31T22:20:57.047Z"}},{"type":"Public","name":"mtFiberseq","owner":"churchmanlab","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Shell","color":"#89e051"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-11-14T01:50:07.861Z"}},{"type":"Public","name":"splicing_order","owner":"churchmanlab","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":0,"starsCount":3,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-05-16T13:36:57.221Z"}},{"type":"Public","name":"SPT5_erythropoiesis","owner":"churchmanlab","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-02-24T02:37:09.510Z"}},{"type":"Public","name":"human-mitoribosome-profiling","owner":"churchmanlab","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":0,"starsCount":3,"forksCount":1,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-07-10T05:09:28.738Z"}},{"type":"Public","name":"Yeast_NETseq_Screen","owner":"churchmanlab","isFork":false,"description":"Dynamics of transcription elongation are finely-tuned by dozens of regulatory factors","allTopics":[],"primaryLanguage":{"name":"Perl","color":"#0298c3"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":1,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-03-20T04:50:30.830Z"}},{"type":"Public","name":"nano-COP","owner":"churchmanlab","isFork":false,"description":"Nanopore analysis of CO-transcriptional processing exposes the nascent transcriptome via direct long-read RNA-seq","allTopics":[],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":0,"starsCount":8,"forksCount":3,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2021-01-29T18:52:03.845Z"}},{"type":"Public","name":"MiMB2019NETseq","owner":"churchmanlab","isFork":false,"description":"NETseq alignment pipeline as described in Martell et al, Methods in Molecular Biology (in press)","allTopics":[],"primaryLanguage":{"name":"Shell","color":"#89e051"},"pullRequestCount":0,"issueCount":0,"starsCount":2,"forksCount":1,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2021-01-03T19:09:44.828Z"}},{"type":"Public","name":"FIDDLE","owner":"churchmanlab","isFork":false,"description":"functional genomic data integration","allTopics":[],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":0,"starsCount":10,"forksCount":2,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2019-09-22T02:49:55.717Z"}},{"type":"Public","name":"Cell2015human_NETseq","owner":"churchmanlab","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":2,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2018-08-29T18:58:08.173Z"}},{"type":"Public","name":"Nature2011yeast_NETseq","owner":"churchmanlab","isFork":true,"description":"","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":2,"forksCount":1,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2012-08-15T18:14:20.000Z"}}],"repositoryCount":12,"userInfo":null,"searchable":true,"definitions":[],"typeFilters":[{"id":"all","text":"All"},{"id":"public","text":"Public"},{"id":"source","text":"Sources"},{"id":"fork","text":"Forks"},{"id":"archived","text":"Archived"},{"id":"template","text":"Templates"}],"compactMode":false},"title":"Repositories"}