{"payload":{"pageCount":2,"repositories":[{"type":"Public","name":"hackseqRNA","owner":"hackseq","isFork":false,"description":"hackseqRNA <- hackseq + RNA.society2020","allTopics":[],"primaryLanguage":null,"pullRequestCount":1,"issueCount":10,"starsCount":4,"forksCount":2,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2020-04-05T05:34:17.244Z"}},{"type":"Public","name":"hs19-pop","owner":"hackseq","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":1,"issueCount":3,"starsCount":0,"forksCount":2,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2019-11-30T19:42:02.188Z"}},{"type":"Public","name":"hs19-var","owner":"hackseq","isFork":false,"description":"Visualizing single-cell RNA-seq experiments at a life-size scale in 3-D","allTopics":[],"primaryLanguage":{"name":"HTML","color":"#e34c26"},"pullRequestCount":0,"issueCount":4,"starsCount":3,"forksCount":5,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2019-11-08T01:48:18.963Z"}},{"type":"Public","name":"hs19-flu","owner":"hackseq","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":1,"issueCount":1,"starsCount":1,"forksCount":5,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2019-10-22T19:55:14.942Z"}},{"type":"Public","name":"hs19-trends","owner":"hackseq","isFork":false,"description":"hackathon project on the trends in bioinformatics","allTopics":[],"primaryLanguage":{"name":"HTML","color":"#e34c26"},"pullRequestCount":0,"issueCount":1,"starsCount":1,"forksCount":3,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2019-10-22T07:34:17.832Z"}},{"type":"Public","name":"hs19-biovis","owner":"hackseq","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":1,"starsCount":0,"forksCount":1,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2019-10-20T21:59:49.127Z"}},{"type":"Public","name":"hackseq19","owner":"hackseq","isFork":false,"description":"hackseq 2019 - [*]-omics hackathon. Vancouver, BC ","allTopics":[],"primaryLanguage":null,"pullRequestCount":0,"issueCount":2,"starsCount":9,"forksCount":5,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2019-10-20T21:48:45.025Z"}},{"type":"Public","name":"hs19-deep","owner":"hackseq","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":1,"issueCount":1,"starsCount":1,"forksCount":2,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2019-10-19T20:00:51.053Z"}},{"type":"Public","name":"hs19-talr","owner":"hackseq","isFork":false,"description":"TALR: Targeted Assembly of Linked Reads","allTopics":[],"primaryLanguage":null,"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2019-10-18T19:08:46.685Z"}},{"type":"Public","name":"hs19-game","owner":"hackseq","isFork":false,"description":"","allTopics":[],"primaryLanguage":null,"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2019-10-11T03:05:01.107Z"}},{"type":"Public","name":"wdnn","owner":"hackseq","isFork":true,"description":"Wide and Deep Neural Net for predicting TB resistance from genotypic data","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":13,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2019-02-24T09:42:52.011Z"}},{"type":"Public archive","name":"2017_project_5","owner":"hackseq","isFork":false,"description":"Developing advanced R tutorials for genomic data analysis","allTopics":[],"primaryLanguage":{"name":"HTML","color":"#e34c26"},"pullRequestCount":0,"issueCount":9,"starsCount":1,"forksCount":2,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2019-01-26T08:34:31.343Z"}},{"type":"Public","name":"modular-assembly-hs18","owner":"hackseq","isFork":false,"description":"Mix and match modular genome assembler components","allTopics":["bioinformatics","genome","bioinformatics-pipeline","genome-assembly","genome-assembly-evaluation","hackseq"],"primaryLanguage":{"name":"Makefile","color":"#427819"},"pullRequestCount":1,"issueCount":2,"starsCount":8,"forksCount":9,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2018-10-22T04:59:03.331Z"}},{"type":"Public","name":"hackseq18","owner":"hackseq","isFork":false,"description":"hackseq 2018 - [*]-omics hackathon. Vancouver, BC","allTopics":[],"primaryLanguage":null,"pullRequestCount":0,"issueCount":1,"starsCount":7,"forksCount":0,"license":"The Unlicense","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2018-10-17T18:44:05.194Z"}},{"type":"Public","name":"hackseq_graphics","owner":"hackseq","isFork":false,"description":"Graphics for hackseq organizations","allTopics":[],"primaryLanguage":null,"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"The Unlicense","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2018-10-17T15:53:18.043Z"}},{"type":"Public","name":"hs18","owner":"hackseq","isFork":true,"description":"hackseq18 sidesite","allTopics":[],"primaryLanguage":{"name":"CSS","color":"#563d7c"},"pullRequestCount":2,"issueCount":0,"starsCount":5,"forksCount":151,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2018-10-16T23:17:27.085Z"}},{"type":"Public","name":"tara-cyc-hs18","owner":"hackseq","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"HTML","color":"#e34c26"},"pullRequestCount":0,"issueCount":3,"starsCount":3,"forksCount":3,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2018-10-14T22:24:48.408Z"}},{"type":"Public","name":"hackseq_2017","owner":"hackseq","isFork":false,"description":"Public files and discussions about hackseq 2017","allTopics":[],"primaryLanguage":null,"pullRequestCount":0,"issueCount":5,"starsCount":3,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2017-11-21T01:59:58.504Z"}},{"type":"Public","name":"vasco","owner":"hackseq","isFork":false,"description":"Visualization of single cell RNA-seq data from tens of thousands of cells in real time","allTopics":[],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":16,"starsCount":6,"forksCount":3,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2017-10-23T21:40:49.842Z"}},{"type":"Public","name":"2017_project_9","owner":"hackseq","isFork":false,"description":"Using CollapseTree with Taxonomic Metadata","allTopics":[],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2017-10-23T01:12:02.003Z"}},{"type":"Public","name":"2017_project_8","owner":"hackseq","isFork":false,"description":"Analysis of tested guide RNA’s used for gene editing via CRISPR to predict optimal future guide sequences","allTopics":[],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":0,"starsCount":3,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2017-10-22T23:03:50.750Z"}},{"type":"Public","name":"phytools","owner":"hackseq","isFork":true,"description":"","allTopics":[],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":56,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2017-10-18T21:13:13.312Z"}},{"type":"Public","name":"2017_project_7","owner":"hackseq","isFork":false,"description":"Improving multi-locus sequence typing software","allTopics":[],"primaryLanguage":null,"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2017-10-10T22:49:50.281Z"}},{"type":"Public","name":"2016_project_2","owner":"hackseq","isFork":false,"description":"Design a tool to optimize the parameters of any command line tool","allTopics":[],"primaryLanguage":{"name":"HTML","color":"#e34c26"},"pullRequestCount":0,"issueCount":2,"starsCount":2,"forksCount":6,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2017-09-06T20:45:25.214Z"}},{"type":"Public","name":"hackseq_projects_2017","owner":"hackseq","isFork":false,"description":"","allTopics":[],"primaryLanguage":null,"pullRequestCount":0,"issueCount":9,"starsCount":6,"forksCount":1,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2017-08-02T21:21:01.630Z"}},{"type":"Public","name":"October_2016","owner":"hackseq","isFork":false,"description":"Planning repository for Genomics Hackathon in Vancouver","allTopics":[],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":2,"issueCount":0,"starsCount":6,"forksCount":7,"license":"Creative Commons Zero v1.0 Universal","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2017-02-24T19:09:03.275Z"}},{"type":"Public","name":"2016_project_4","owner":"hackseq","isFork":false,"description":"Pseudo-WGS variant calling for common cell types aggregating ChIP-seq, RNA-seq and DHS from ENCODE and Roadmap Epigenomics data","allTopics":[],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":1,"starsCount":2,"forksCount":1,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2016-10-18T19:06:20.354Z"}},{"type":"Public","name":"2016_project_8","owner":"hackseq","isFork":false,"description":"Explore the use of 10x Genomics' Linked-Reads to unlock currently inaccessible parts of the genome","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":1,"starsCount":1,"forksCount":1,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2016-10-18T00:20:37.430Z"}},{"type":"Public","name":"Indicator_contig_predictor","owner":"hackseq","isFork":false,"description":"A two-way classifier to characterize metagenomes based on short and long read technologies","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":1,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2016-10-17T23:32:12.043Z"}},{"type":"Public","name":"2016_project_5","owner":"hackseq","isFork":false,"description":"Evaluating epigenetic modifications in ChIP-seq and methylation data across cell types and states.","allTopics":[],"primaryLanguage":{"name":"HTML","color":"#e34c26"},"pullRequestCount":0,"issueCount":5,"starsCount":1,"forksCount":1,"license":"BSD 2-Clause \"Simplified\" License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2016-10-17T22:56:47.111Z"}}],"repositoryCount":33,"userInfo":null,"searchable":true,"definitions":[],"typeFilters":[{"id":"all","text":"All"},{"id":"public","text":"Public"},{"id":"source","text":"Sources"},{"id":"fork","text":"Forks"},{"id":"archived","text":"Archived"},{"id":"template","text":"Templates"}],"compactMode":false},"title":"Repositories"}