openMetadataInitiative

All

23 repositories

openMINDS_documentation
Public
Read-The-Docs documentation for the openMINDS metadata framework.
documentation target openminds
documentation target openminds
MIT License
•4•0•27•5•Updated Mar 10, 2026Mar 10, 2026
openMINDS_instances
Public
Well defined metadata instances for selected schemas of the openMINDS metadata models.
openminds instance-libraries
openminds instance-libraries
Python
•
MIT License
•17•4•81•17•Updated Mar 10, 2026Mar 10, 2026
openMINDS_JSON-Schema
Public
Complete collection of schemas for the metadata models of the openMINDS metadata framework. All schemas are formatted in JSON-Schema (*.schema.json).
target schema-format openminds
target schema-format openminds
MIT License
•2•0•2•1•Updated Mar 10, 2026Mar 10, 2026
openMINDS
Public
Complete collection of schemas for the metadata models of the openMINDS metadata framework. All schemas are formatted in the openMINDS syntax (*.schema.omi.json…
openminds metadata-model
openminds metadata-model
MIT License
•4•3•13•2•Updated Mar 10, 2026Mar 10, 2026
openMINDS_core
Public
The openMINDS core metadata model includes schemas that can be used to describe the general origin, location and content of research products.
openminds schema-module
openminds schema-module
MIT License
•20•24•22•0•Updated Mar 10, 2026Mar 10, 2026
openMINDS_SANDS
Public
A metadata model capturing Spatial Anchoring of Neuroscience Data Structures, including brain atlas definitions.
openminds schema-module
openminds schema-module
Python
•
MIT License
•11•14•4•0•Updated Mar 10, 2026Mar 10, 2026
openMINDS_controlledTerms
Public
Metadata model for the consistent registration of well-defined terms as well as a corresponding library of terminologies (including links to ontological terms w…
openminds schema-module
openminds schema-module
MIT License
•14•8•6•0•Updated Mar 10, 2026Mar 10, 2026
openMINDS_actions
Public
CI/CD pipelines for openMINDS repositories using GitHub Actions.
tooling utils openminds
tooling utils openminds
Python
•
MIT License
•1•0•7•3•Updated Mar 10, 2026Mar 10, 2026
openMINDS_MATLAB
Public
A MATLAB toolbox for generating openMINDS-compliant linked metadata.
metadata linked-data neuroscience
metadata linked-data neuroscience target openminds programming-package
MATLAB
•
MIT License
•3•4•11•1•Updated Mar 6, 2026Mar 6, 2026
openMINDS_neuroimaging
Public
A metadata model for MRI experiments; an openMINDS extension
openminds schema-module
openminds schema-module
MIT License
•4•1•1•0•Updated Mar 5, 2026Mar 5, 2026
openMINDS_computation
Public
A metadata model for simulation, data analysis and visualization provenance in neuroscience
openminds schema-module
openminds schema-module
MIT License
•6•0•0•0•Updated Mar 5, 2026Mar 5, 2026
openMINDS_ephys
Public
A metadata model for capturing in-depth descriptions of electrophysiology experiments.
openminds schema-module
openminds schema-module
MIT License
•7•6•0•0•Updated Mar 5, 2026Mar 5, 2026
openMINDS_publications
Public
A metadata model for scholarly publications in neuroscience, including live papers
openminds schema-module
openminds schema-module
MIT License
•2•0•1•0•Updated Feb 25, 2026Feb 25, 2026
openMINDS_Python
Public
Python package for the openMINDS metadata models. The package contains all openMINDS schemas as Python classes in addition to schema base classes and utility me…
tooling target openminds
tooling target openminds programming-package
Python
•
MIT License
•4•3•17•1•Updated Feb 16, 2026Feb 16, 2026
openMINDS_microscopy
Public
A metadata model for capturing in-depth descriptions of microscopy investigations, including functional microscopy and optogenetics.
MIT License
•1•0•3•1•Updated Nov 10, 2025Nov 10, 2025
bids2openminds
Public
A tool to generate openMINDS metadata from BIDS datasets
converter openminds
converter openminds
Python
•
MIT License
•6•7•20•4•Updated Nov 4, 2025Nov 4, 2025
openMINDS_specimenPrep
Public
A metadata model capturing in-depth descriptions of specimen preparations.
openminds schema-module
openminds schema-module
MIT License
•4•1•1•1•Updated Nov 3, 2025Nov 3, 2025
openMINDS_stimulation
Public
A metadata model capturing in-depth descriptions of stimuli and stimulation protocols in neuroscience.
openminds schema-module
openminds schema-module
MIT License
•3•1•1•1•Updated Aug 1, 2025Aug 1, 2025
openMINDS_chemicals
Public
A metadata model for capturing in-depth descriptions of chemical substances and mixtures.
openminds schema-module
openminds schema-module
MIT License
•2•2•2•0•Updated Jul 23, 2025Jul 23, 2025
openMINDS_LinkML
Public
Complete collection of schemas for the metadata models of the openMINDS metadata framework. All schemas are formatted in LinkML (*.yaml).
target schema-format openminds
target schema-format openminds
MIT License
•1•2•1•0•Updated May 28, 2025May 28, 2025
openMINDS_Java
Public
A Java library for openMINDS
target openminds programming-package
target openminds programming-package
Java
•1•0•0•1•Updated Apr 4, 2025Apr 4, 2025
openMINDS_OWL
Public
Complete collection of schemas for the metadata models of the openMINDS metadata framework. All schemas are expressed in OWL and available in multiple syntaxes.
target schema-format openminds
target schema-format openminds
MIT License
•1•0•0•2•Updated Jan 24, 2025Jan 24, 2025
.github
Public
README repository for openMetadataInitiative organization.
0•0•0•0•Updated Sep 23, 2024Sep 23, 2024