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    14 repositories

    • protocols

      Public
      Jupyter Notebook
      •
      MIT License
      •0•0•1•0•Updated Sep 4, 2026Sep 4, 2026

    • covid19

      Public
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Aug 26, 2026Aug 26, 2026

    • BBBpredictor

      Public
      Jupyter Notebook
      •
      MIT License
      •0•2•0•0•Updated Aug 26, 2026Aug 26, 2026

    • CC_protocols

      Public
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Aug 26, 2026Aug 26, 2026

    • PocketVec

      Public
      C++
      •
      MIT License
      •2•13•2•0•Updated Aug 26, 2026Aug 26, 2026

    • chemical_checker

      Public
      Jupyter Notebook
      •
      MIT License
      •1•4•1•0•Updated Aug 18, 2026Aug 18, 2026

    • reaxys_integration_in_cc

      Public
      Code and models for integrating Reaxys compound–target data into Chemical Checker bioactivity signatures and evaluating downstream target prediction.
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Aug 3, 2026Aug 3, 2026

    • LINCS_scGPT_embeddings

      Public
      Pipeline and analysis code for fine-tuning scGPT on LINCS L1000 gene expression profiles
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Aug 3, 2026Aug 3, 2026

    • cytotoxics_design

      Public
      Jupyter Notebook
      •
      MIT License
      •0•1•0•0•Updated Jul 5, 2026Jul 5, 2026

    • GEx_Predictor

      Public
      Linking Small Molecule Bioactivity Descriptors to Gene Expression via Deep Learning
      Jupyter Notebook
      •
      MIT License
      •1•0•0•0•Updated May 1, 2026May 1, 2026

    • cell-cell-communication

      Public
      Jupyter Notebook
      •
      MIT License
      •1•0•0•0•Updated Nov 14, 2025Nov 14, 2025

    • signaturizer

      Public
      Jupyter Notebook
      •
      MIT License
      •0•3•0•0•Updated Jun 12, 2025Jun 12, 2025

    • bioteque

      Public
      Python
      •
      MIT License
      •2•1•0•0•Updated Jun 12, 2025Jun 12, 2025

    • signaturizer3D

      Public
      Python
      •
      MIT License
      •0•2•0•0•Updated Jun 12, 2025Jun 12, 2025
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