MFAS

Meta-Feature Analysis System (MFAS), a comprehensive and efficient toolkit to handle more than 20 types of meta-feature analysis in both genome and transcriptome. It provides the option to output the meta-feature table or the visualization plots.

Instructions

1. Prerequisites
2. Run MFAS

Downloads

1. Source code
2. Sample data
3. ENCODE eCLIP metagene profiles

Examples

1. Sample input
2. Sample output

Reference

Lin, J., Chen, Y., Zhang, Y., Haifan L., & Ouyang, Z. (20xx). Deciphering the role of RNA structure in RNA translation

License

Use of MFAS is free for academic users under the GNU General Public License (GPL). Commercial users please contact the authors.

Contact

Zhengqing Ouyang: ouyang@schoolph.umass.edu Jianan Lin: jianan.jay.lin@gmail.com