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Ensembl Transcriptomes v96
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@sbooeshaghi sbooeshaghi released this 22 Jun 04:52
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These index files were produced using kallisto version 0.45.1 on Ensembl v96 transcriptomes. The transcripts_to_genes.txt files were made with t2g.py (see file below).

Each "tarball" https://en.wikipedia.org/wiki/Tar_(computing) contains

  1. kallisto index transcriptome.idx
  2. Species GTF file from Ensembl species.gtf
  3. Species cDNA FASTA file from Ensembl species.fa
  4. Transcripts to Genes Map (w/ version numbers) transcripts_to_genes.txt for use with kallisto | bustools

Caenorhabditis elegans
Danio rerio
Drosophila melanogaster
Gallus gallus
Homo sapiens
Mus musculus
Pan troglodytes
Rattus norvegicus
Saccharomyces cerevisiae
Xenopus tropicalis

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