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Aaron Wenger
Latest commit 09d1878 Mar 25, 2019
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giabcuration Add GIAB curation information fron Nate Olson Mar 25, 2019
phasing Add phasing scripts from Jana Ebler Mar 25, 2019
smallvariants Fix improper indent Mar 14, 2019 Add phasing scripts from Jana Ebler Mar 25, 2019

This repository contains custom scripts and workflow notes for "Highly-accurate long-read sequencing improves variant detection and assembly of a human genome" (


  • giabcuration - scripts for "Revising and Expanding Genome in a Bottle Benchmarks" section.
  • phasing - scripts for "Phasing Small Variants with CCS Reads" section.
  • smallvariants - scripts and workflows for "Small Variant Detection with CCS Reads" section.
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