Pinned repositories

  1. nozzle

    Nozzle is a report generation toolkit for data analysis pipelines implemented in R.

    R 53 22

  2. NGSCheckMate

    Software program for checking sample matching for NGS data

    Python 29 8

  3. emsar

    EMSAR quantifies transcripts from RNA-seq data (Citation : Lee et al., BMC Bioinformatics 2015, 16:278, http://www.biomedcentral.com/1471-2105/16/278)

    C 6 2

  • R 1 Updated Jun 28, 2018
  • A lightweight (largely) self-contained genotyper for SNVs in single-cell DNA-seq data.

    Python Updated Jun 15, 2018
  • Dockerized R Shiny app for Isidro

    R 1 Apache-2.0 Updated Jun 6, 2018
  • A python library for single cell whole-genome sequencing quality evaluation

    Python 6 1 MIT Updated May 11, 2018
  • TeX 3 Updated Apr 9, 2018
  • Software program for checking sample matching for NGS data

    Python 29 8 MIT Updated Mar 23, 2018
  • This repo exists for users of ParkLab software to be able to submit issues and have them remediated.

    Updated Jul 25, 2017
  • EMSAR quantifies transcripts from RNA-seq data (Citation : Lee et al., BMC Bioinformatics 2015, 16:278, http://www.biomedcentral.com/1471-2105/16/278)

    C 6 2 Updated May 5, 2016
  • Nozzle is a report generation toolkit for data analysis pipelines implemented in R.

    R 53 22 Updated Apr 2, 2016
  • Comparative modENCODE/ENCODE website.

    CSS 1 1 MIT Updated Mar 26, 2015
  • Swagger UI is a dependency-free collection of HTML, Javascript, and CSS assets that dynamically generate beautiful documentation from a Swagger-compliant API.

    JavaScript 5,733 Updated Dec 28, 2014
  • Puppet 1 Updated Jul 30, 2014
  • JavaScript 2 Updated Jul 2, 2014