@PathwayCommons

Pathway Commons

A network biology resource for biological pathway information and software.

Pinned repositories

  1. about

    Pathway Commons Home Page (/about/)

    CSS 2 1

  2. cpath2

    BioPAX/PSI-MI biological pathway data integration and access platform

    Java 2 3

  3. pathways-search

    A web app to search pathways in Pathway Commons

    JavaScript 1 1

  4. guide

    Resource for pathway analysis and Pathway Commons

    JavaScript 3

  5. cytoscape-sbgn-stylesheet

    View biological networks via Cytoscape.js and sbgn-ml

    JavaScript 2

  6. cpath2-client

    A library to facilitate access to the Pathway Commons 2 API

    JavaScript

  • A web app to search pathways in Pathway Commons

    JavaScript 1 1 Updated Sep 22, 2017
  • BioPAX/PSI-MI biological pathway data integration and access platform

    Java 2 3 Updated Sep 21, 2017
  • Pathway Commons Bio Network Visualizer

    JavaScript 5 2 Updated Sep 21, 2017
  • Resource for pathway analysis and Pathway Commons

    JavaScript 3 Updated Sep 20, 2017
  • JavaScript Updated Sep 13, 2017
  • A project to digitally capture biological data from academic papers

    JavaScript 10 1 Updated Sep 12, 2017
  • View biological networks via Cytoscape.js and sbgn-ml

    JavaScript 2 Updated Sep 7, 2017
  • Java 3 2 Updated Aug 25, 2017
  • Reusable React.js components for Pathway Commons apps

    Updated Aug 24, 2017
  • A library to facilitate access to the Pathway Commons 2 API

    JavaScript Updated Aug 22, 2017
  • A web app to search sub-networks in Pathway Commons

    JavaScript Updated Aug 21, 2017
  • The Web API Docs App

    JavaScript Updated Aug 11, 2017
  • Pathway Commons Home Page (/about/)

    CSS 2 1 Updated Aug 10, 2017
  • Pathway visualization and analysis tool for Pathway Commons and other BioPAX data

    Java 4 5 Updated Aug 7, 2017
  • Chisio Layout (ChiLay) graph layout framework for SBGN

    Java 2 Updated Aug 3, 2017
  • Cytoscape 3 app that connects to PC2 (cpath2) and imports BioPAX sub-networks into Cytoscape 3 for analysis.

    Java 1 4 Updated Jul 10, 2017
  • Comparative Toxicogenomics Database (CTD) to BioPAX Level3 data converter.

    Java Updated Jun 26, 2017
  • DrugBank to BioPAX Level3 data converter.

    Java Updated Jun 26, 2017
  • MSigDB (human C3 TFT motif gene sets only) to BioPAX Level3 data converter.

    Java Updated Jun 26, 2017
  • An npm module that converts xml based SBGN files to JSON for Cytoscape.js

    JavaScript 1 Updated Jun 2, 2017
  • NodeJS Tool for scraping Pathway Commons for statistical analysis

    JavaScript Updated May 23, 2017
  • Neighborhood Maps Server for cPath1 (PC)

    Java Updated May 3, 2017
  • Modeling and querying support for SIF graphs

    Java Updated Apr 17, 2017
  • SBML to BioPAX Level3 converter, specific to the Recon2 data.

    Java Updated Feb 27, 2017
  • Programming task for software developers

    JavaScript 2 Updated Feb 23, 2017
  • The pathway resource list

    Perl 1 Updated Feb 2, 2017
  • A skeleton for Pathway Commons JS applications

    JavaScript Updated Jan 27, 2017
  • MiRTarBase to BioPAX Level3 data converter.

    Java Updated Dec 15, 2016
  • JavaScript 2 Updated Nov 30, 2016
  • cPath: old Pathway Commons portal engine

    Java 1 Updated May 6, 2016