@PathwayCommons

Pathway Commons

A network biology resource for biological pathway information and software.

  • An npm module that converts xml based SBGN files to JSON for Cytoscape.js

    JavaScript Updated Feb 24, 2017
  • Programming task for software developers

    JavaScript 1 Updated Feb 23, 2017
  • BioPAX/PSI-MI biological pathway data integration and access platform

    Web Ontology Language 2 3 Updated Feb 23, 2017
  • A JavaSript library that renders biological networks using cytoscape.js and the System Biology Graphical Notation language

    javascript svg science es6 graph biology graphs

    JavaScript Updated Feb 23, 2017
  • Pathway visualization and analysis tool for Pathway Commons and other BioPAX data

    Java 2 5 Updated Feb 21, 2017
  • A web interface to make Pathway Commons more accessible

    JavaScript Updated Feb 17, 2017
  • DrugBank to BioPAX Level3 data converter.

    Java Updated Feb 16, 2017
  • PC Pathways finder/viewer responsive web app

    JavaScript 1 Updated Feb 15, 2017
  • 1 Updated Feb 14, 2017
  • Resource for pathway analysis and Pathway Commons

    JavaScript 3 Updated Feb 10, 2017
  • The pathway resource list

    Perl 1 Updated Feb 2, 2017
  • A skeleton for Pathway Commons JS applications

    JavaScript Updated Jan 27, 2017
  • A visualization tool for process description maps in SBGN

    JavaScript 1 7 Updated Jan 12, 2017
  • MiRTarBase to BioPAX Level3 data converter.

    Java Updated Dec 16, 2016
  • SBML to BioPAX Level3 converter, specific to the Recon2 data.

    Java Updated Dec 7, 2016
  • A web component that displays biological network data

    Updated Dec 1, 2016
  • JavaScript 2 Updated Nov 30, 2016
  • MSigDB (TRANSFAC) to BioPAX Level3 data converter.

    Java Updated Nov 29, 2016
  • An npm module that saves data URIs representing cytoscape graph images to files.

    JavaScript Updated Nov 28, 2016
  • Comparative Toxicogenomics Database (CTD) to BioPAX Level3 data converter.

    Java Updated Nov 24, 2016
  • Pathway Commons Bio Network Visualizer

    JavaScript 2 1 Updated Oct 7, 2016
  • Java 3 2 Updated Sep 24, 2016
  • A project to digitally capture biological data from academic papers

    JavaScript 8 1 Updated Aug 3, 2016
  • Pathway Commons Home Page (/about/)

    JavaScript 2 Updated Jul 4, 2016
  • Cytoscape 3 app that connects to PC2 (cpath2) and imports BioPAX sub-networks into Cytoscape 3 for analysis.

    Java 1 4 Updated May 24, 2016
  • cPath: old Pathway Commons portal engine

    Java 1 Updated May 6, 2016
  • Neighborhood Maps Server for cPath1 (PC)

    Web Ontology Language Updated May 6, 2016
  • NLP web services for the Factoid project

    Java 1 Updated Apr 23, 2016
  • A Java-based software for visualizing and translating the KEGG PATHWAY database. Conversion of KGML files into BioPAX, SBML, GraphML, GML, and various other formats.

    Java 2 Updated Dec 3, 2015
  • BioJS component for PCViz

    JavaScript 4 2 Updated Sep 13, 2015