A curated list of deep learning papers in ecology.
Clone or download
Fetching latest commit…
Cannot retrieve the latest commit at this time.
Permalink
Type Name Latest commit message Commit time
Failed to load latest commit information.
README.md

README.md

Awesome Deep Ecology Awesome

A curated list of deep learning resources for computer vision, inspired by awesome-deep-vision and awesome-computer-vision.

We are looking for additional maintainers! Let me know (pcg19 at duke) if interested.

An introduction to Deep Learning for Ecology with some neural networks you can run in the cloud to get a more intuitive understanding of deep learning, as well as suggestions for papers, videos, and quick resources, can be found here.

Papers

Reviews

Detection

detection

  • Deep learning for benthic fauna identification. OCEANS 2016 MTS/IEEE Monterey, OCE 2016.
    • Marburg, A., & Bigham, K. (2016).
    • doi:10.1109/OCEANS.2016.7761146
  • Right whale recognition using convolutional neural networks.

Camera Traps

Aerial Imagery

  • Multi-modal survey of Adélie penguin mega-colonies reveals the Danger Islands as a seabird hotspot
    • Alex Borowicz, Philip McDowall, Casey Youngflesh, Thomas Sayre-McCord, Gemma Clucas, Rachael Herman, Steven Forrest, Melissa Rider, Mathew Schwaller, Tom Hart, Stéphanie Jenouvrier, Michael J. Polito, Hanumant Singh & Heather J. Lynch
    • https://www.nature.com/articles/s41598-018-22313-w
  • Detecting Wildlife in Unmanned Aerial Systems Imagery Using Convolutional Neural Networks Trained with an Automated Feedback Loop
    • Bowley, C., Mattingly, M., Barnas, A., Ellis-Felege, S., & Desell, T. (2018).
    • doi:10.1007/978-3-319-93698-7_6

Audio

Other

  • Fast accurate fish detection and recognition of underwater images with Fast R-CNN
  • Bat detective—Deep learning tools for bat acoustic signal detection

Tracking

Semantic Segmentation

Pose Estimation

Other Topics

Software

Datasets

Contributing

Please feel free to pull requests to add papers.

Sharing