pepr is not yet released, but we are planning to do so shortly. Complete documentation and API for the
pepr R package is at code.databio.org/pepr.
pepr package: Portable Encapsulated Projects in R
pepr is an R package for reading Portable Encapsulated Projects, or PEPs, in R. If you describe your project (configuration and samples) according to this format, you can load all project metadata into R using the
pepr package. To test
pepr, you can try loading one of the example PEPs.
Install from GitHub:
Load a project and explore metadata like this:
library('pepr') p = Project(file = "~/code/microtest/config/microtest_config.yaml") samples(p) config(p)