Skip to content
An R-based project metadata manager for portable encapsulated projects
R Shell
Branch: master
Clone or download
Fetching latest commit…
Cannot retrieve the latest commit at this time.
Permalink
Type Name Latest commit message Commit time
Failed to load latest commit information.
R
inst
man
tests
vignettes
.DS_Store
.Rbuildignore
.gitignore
.travis.yml
DESCRIPTION
LICENSE
NAMESPACE
NEWS.md
README.md
_pkgdown.yaml
update_examples.sh

README.md

Build Status Coverage Status PEP compatible

pepr is not yet released, but we are planning to do so shortly. Complete documentation and API for the pepr R package is at code.databio.org/pepr.

The pepr package: Portable Encapsulated Projects in R

pepr is an R package for reading Portable Encapsulated Projects, or PEPs, in R. If you describe your project (configuration and samples) according to this format, you can load all project metadata into R using the pepr package. To test pepr, you can try loading one of the example PEPs.

Quick start:

Install from GitHub:

devtools::install_github("pepkit/pepr")

Load a project and explore metadata like this:

library('pepr')
p = Project(file = "~/code/microtest/config/microtest_config.yaml")

samples(p)
config(p)
You can’t perform that action at this time.