Python simulation of a single-celled organism
Python

README

Python simulation of a single-celled organism
Peter Collingridge 2010

> testCell.py
This is the top-level module
* Gives an example of how to create and update cells
* Runs simulation for 48000 units of time

> virtualCell.py
* Defines Solution and Cell classes
* Imports <biochemistry>

> biochemistry.py
* Contains all_metabolites list and all_reactions dictionary
* Defines Metabolite, Reaction and Protein classes

> graphDrawer.py
* Takes multiple time series and plots them as an SVG