This is the Matlab code for: Brain temperature affects quantitative features of hippocampal sharp wave ripples. Peter C. Petersen, Mihály Vöröslakos, György Buzsáki. Journal of Neurophysiology, May 2022.
Biochemical mechanisms are temperature dependent. Brain temperature shows wide variations across brain states, and such changes may explain quantitative changes in network oscillations. Here, we report on the relationship between various hippocampal sharp wave ripple features and brain temperature. Ripple frequency, occurrence rate, and duration correlated with temperature dynamics. By focal manipulation of the brain temperature in the hippocampal CA1 region, we show that ripple frequency can be increased and decreased by local heating and cooling, respectively. Changes in other parameters, such as the rate of sharp wave-ripple complex (SPW-R) and ripple duration, were not consistently affected. Our findings suggest that brain temperature in the CA1 region plays a leading role in affecting ripple frequency, whereas other parameters of SPW-Rs may be determined by mechanisms upstream from the CA1 region. These findings illustrate that physiological variations of brain temperature exert important effects on hippocampal circuit operations.
This repository contains the Matlab code for the paper with minimal comments. Please reach out to Peter Petersen for more help.
- CellExplorer: https://cellexplorer.org/
- Buzcode: https://github.com/buzsakilab/buzcode
- Signal Processing Toolbox: https://se.mathworks.com/products/signal.html
- Statistics and Machine Learning Toolbox: https://se.mathworks.com/products/statistics.html
- Curve Fitting Toolbox: https://se.mathworks.com/products/curvefitting.html
The data is available from the Buzsaki lab databank: https://buzsakilab.com/wp/projects/entry/66407/