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Commits on Jun 18, 2015
  1. Merge pull request #105 from mjhsieh/patch-1

    committed
    one extra unicode string in the beginning of file
Commits on Jun 17, 2015
  1. @mjhsieh

    one extra unicode string in the beginning of file

    mjhsieh committed
    ```
    bamtools-2.4.0/src/api/internal/io/HttpHeader_p.cpp:1: error: stray ‘\357’ in program
    bamtools-2.4.0/src/api/internal/io/HttpHeader_p.cpp:1: error: stray ‘\273’ in program
    bamtools-2.4.0/src/api/internal/io/HttpHeader_p.cpp:1: error: stray ‘\277’ in program
    ```
Commits on Jun 16, 2015
  1. Minor version bump - 2.4.0

    committed
     - Added support for custom header tags.
     - Suppressed clang compiler warnings.
    
    Apologies to all w/ outstanding issues for letting this project sit
    idle, but updates will be coming out **much** more quickly now.
Commits on Jul 29, 2013
Commits on Jul 25, 2013
Commits on Jul 24, 2013
  1. Minor version bump - 2.3.0

    committed
      * stabilized remote file support
      * additional bug fixes & feature requests
      * bamtools-utils & jsoncpp libs now built as static libs by default
    (issue #55)
  2. Merge pull request #81 from chmille4/master

    committed
    Fix invalid json output
  3. Merge pull request #72 from grenaud/master

    committed
    fixed copy of SamHeader.cpp
  4. Changed platform check to use standard cmake variable (issue #66)

    committed
      - 'WIN32' instead of '_WIN32'
  5. @chmille4

    Fix invalid json output

    chmille4 committed
    add quotes to the filename variable so that the json outputed is valid json
Commits on May 3, 2013
  1. Added length property to filter tool.

    committed
     * Queries against the BamAlignment::Length field.
Commits on Apr 28, 2013
Commits on Feb 12, 2013
  1. @grenaud

    Fixed SamHeader copy

    grenaud committed
Commits on Jan 15, 2013
  1. Fixed version number

    committed
Commits on Dec 10, 2012
  1. Merge pull request #67 from ekg/master

    committed
    Add input file list method to bamtools merge
Commits on Dec 7, 2012
  1. @ekg

    resolve bamtools #68

    ekg committed
    Check that the quality string is fully comprised of "*", rather than if
    the first character is "*".
  2. @ekg
Commits on Dec 4, 2012
  1. Version 2.2.2

    committed
      * Added: BamAlignment::GetArrayTagType()
Commits on Nov 29, 2012
  1. @ekg

    add input file list method to bamtools merge

    ekg committed
    By using -list users can specify a file list.  Workaround for the case
    when there are more input files than allowed by the maximum number of
    command-line arguments.
Commits on Nov 19, 2012
  1. Fixed: typo in BamReader.h

    committed
  2. Version 2.2.1

    committed
     * Added:
         BamAlignment::GetTagNames()
         BamReader::GetConstSamHeader()
     * Fixed:
         'bamtools convert' - issues with unsigned char data in tags
         empty quality string handling in BamWriter
  3. Added GetConstSamHeader() to BamReader

    committed
     * Allows for more efficient (read-only) access to SamHeader data
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