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AROS - Open Automated Robotic System for Biological Laboratories

This is the landing page for a suite of open soruce components for lab automation. The initial system was developed to automate morphological profiling according to the Cell Painting protocol (high-content imaging using multiple dyes) but the componets are general and can be used in other settings as well.

Contact: Prof. Ola Spjuth. ola.spjuth@farmbio.uu.se. Research group website: https://pharmb.io

Repos:

Cellpainter, imaging and lab robots monorepo

https://github.com/pharmbio/robotlab

AROS DB

Database in the center of the system, managing images, projects, experiment design, data, metadata, and much more...
https://github.com/pharmbio/imagedb

Robot Lab Cameras

Streaming cameras setup for live monitoring of the system via Grafana dashboards
https://github.com/pharmbio/robot_lab_cameras

Robot Lab Grafana Dashboards

Grafana dashboards for monitoring of the lab sensors and robots
https://github.com/pharmbio/robot_lab_grafana_dashboards

Robot Lab Prometheus Exporters

Prometheus exporters for lab sensors and robot status
https://github.com/pharmbio/robot_lab_prometheus_exporters

DIY Automated Shaker Robot

Modifications to provide Arduino nano controlled Fisherbrand plate shaker.
https://github.com/pharmbio/shaker-robot

DIY Automated Incubator

Modifications to provide automatic door opener on existing incubator
https://github.com/pharmbio/incubator-automation

Automation Experimental Planning + GUI

Experimental design software
https://github.com/pharmbio/lab-design

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