This is the landing page for a suite of open soruce components for lab automation. The initial system was developed to automate morphological profiling according to the Cell Painting protocol (high-content imaging using multiple dyes) but the componets are general and can be used in other settings as well.
Contact: Prof. Ola Spjuth. ola.spjuth@farmbio.uu.se. Research group website: https://pharmb.io
https://github.com/pharmbio/robotlab
Database in the center of the system, managing images, projects, experiment design, data, metadata, and much more...
https://github.com/pharmbio/imagedb
Streaming cameras setup for live monitoring of the system via Grafana dashboards
https://github.com/pharmbio/robot_lab_cameras
Grafana dashboards for monitoring of the lab sensors and robots
https://github.com/pharmbio/robot_lab_grafana_dashboards
Prometheus exporters for lab sensors and robot status
https://github.com/pharmbio/robot_lab_prometheus_exporters
Modifications to provide Arduino nano controlled Fisherbrand plate shaker.
https://github.com/pharmbio/shaker-robot
Modifications to provide automatic door opener on existing incubator
https://github.com/pharmbio/incubator-automation
Experimental design software
https://github.com/pharmbio/lab-design