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An introduction to image analysis workflows with PlantCV

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Presenters: Malia Gehan, Haley Schuhl, and Noah Fahlgren

Project website: https://plantcv.danforthcenter.org/

Twitter: @plantcv

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Veley KM, Berry JC, Fentress SJ, Schachtman DP, Baxter I, Bart R. 2017. High-throughput profiling and analysis of plant responses over time to abiotic stress. Plant direct 1:e00023. DOI: 10.1002/pld3.23.

Gehan MA, Fahlgren N, Abbasi A, Berry JC, Callen ST, Chavez L, Doust AN, Feldman MJ, Gilbert KB, Hodge JG, Hoyer JS, Lin A, Liu S, Lizárraga C, Lorence A, Miller M, Platon E, Tessman M, Sax T. 2017. PlantCV v2: Image analysis software for high-throughput plant phenotyping. PeerJ 5:e4088. DOI: 10.7717/peerj.4088.

Fahlgren N, Feldman M, Gehan MA, Wilson MS, Shyu C, Bryant DW, Hill ST, McEntee CJ, Warnasooriya SN, Kumar I, Ficor T, Turnipseed S, Gilbert KB, Brutnell TP, Carrington JC, Mockler TC, Baxter I. 2015. A versatile phenotyping system and analytics platform reveals diverse temporal responses to water availability in Setaria. Molecular Plant 8:1520–1535. DOI: 10.1016/j.molp.2015.06.005.

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