{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":615592690,"defaultBranch":"main","name":"simMutualism","ownerLogin":"pjaml","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2023-03-18T04:56:25.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/69218159?v=4","public":true,"private":false,"isOrgOwned":false},"refInfo":{"name":"","listCacheKey":"v0:1691531253.0","currentOid":""},"activityList":{"items":[{"before":"15a9704db491723f3b2660e67bf1a12441d59e43","after":"8c5e9c1d44b78fa67b68360d1519d40549fc36d8","ref":"refs/heads/main","pushedAt":"2023-08-24T21:14:34.000Z","pushType":"push","commitsCount":3,"pusher":{"login":"venka210","name":null,"path":"/venka210","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/79661338?s=80&v=4"},"commit":{"message":"Merge branch 'main' of https://github.com/pjaml/simMutualism","shortMessageHtmlLink":"Merge branch 'main' of https://github.com/pjaml/simMutualism"}},{"before":"34b48b63dde001bcb1b39896bb279cf2423a165f","after":"15a9704db491723f3b2660e67bf1a12441d59e43","ref":"refs/heads/main","pushedAt":"2023-08-08T21:47:33.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"pjaml","name":"Peter Lutz","path":"/pjaml","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/69218159?s=80&v=4"},"commit":{"message":"Add files via upload","shortMessageHtmlLink":"Add files via upload"}},{"before":"2a58ecebfefe16dcdba50ee7a041c05cafd20172","after":"34b48b63dde001bcb1b39896bb279cf2423a165f","ref":"refs/heads/main","pushedAt":"2023-07-14T19:03:07.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"pjaml","name":"Peter Lutz","path":"/pjaml","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/69218159?s=80&v=4"},"commit":{"message":"doc: include instructions for updating directories","shortMessageHtmlLink":"doc: include instructions for updating directories"}},{"before":"269e5aa65737d856a2943961042caf2e2cae02ba","after":"2a58ecebfefe16dcdba50ee7a041c05cafd20172","ref":"refs/heads/main","pushedAt":"2023-07-04T16:25:06.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"pjaml","name":"Peter Lutz","path":"/pjaml","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/69218159?s=80&v=4"},"commit":{"message":"fix: remove HEAD from top of files","shortMessageHtmlLink":"fix: remove HEAD from top of files"}},{"before":"bfdaf650506155cf4f1719bd4d2bd25cae33a339","after":"269e5aa65737d856a2943961042caf2e2cae02ba","ref":"refs/heads/main","pushedAt":"2023-07-03T20:38:32.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"pjaml","name":"Peter Lutz","path":"/pjaml","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/69218159?s=80&v=4"},"commit":{"message":"nit: remove test comments","shortMessageHtmlLink":"nit: remove test comments"}},{"before":"e3b6f476361a11bd03a5d7cdf767f7812455be73","after":"bfdaf650506155cf4f1719bd4d2bd25cae33a339","ref":"refs/heads/main","pushedAt":"2023-07-03T20:31:20.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"pjaml","name":"Peter Lutz","path":"/pjaml","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/69218159?s=80&v=4"},"commit":{"message":"fix: dos2unix file encodings","shortMessageHtmlLink":"fix: dos2unix file encodings"}},{"before":"d6dd38f6ca4a77c3705dada1cf90792cbbc477a8","after":"e3b6f476361a11bd03a5d7cdf767f7812455be73","ref":"refs/heads/main","pushedAt":"2023-07-03T16:52:16.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"pjaml","name":"Peter Lutz","path":"/pjaml","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/69218159?s=80&v=4"},"commit":{"message":"check for ss variance in last 10 iterations\n\nThe check to determine whether the species were at a steady state was\ncomparing the last 5 iterations. In order to make it more sensitive, I\nchanged this to the last 10 iterations. In other words, the last 10\niterations of a simulation need to be within the given tolerance in\norder to be called \"at steady state.\"","shortMessageHtmlLink":"check for ss variance in last 10 iterations"}},{"before":"9da59998b3d9c236c8ef91dfa02346a48e474f8a","after":"d6dd38f6ca4a77c3705dada1cf90792cbbc477a8","ref":"refs/heads/main","pushedAt":"2023-06-29T17:08:36.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"venka210","name":null,"path":"/venka210","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/79661338?s=80&v=4"},"commit":{"message":"Resolved growthODEs","shortMessageHtmlLink":"Resolved growthODEs"}},{"before":"bc2ba796201b99ac17b01518bcd06e28983d7fb0","after":"9da59998b3d9c236c8ef91dfa02346a48e474f8a","ref":"refs/heads/main","pushedAt":"2023-06-29T17:06:31.000Z","pushType":"push","commitsCount":4,"pusher":{"login":"venka210","name":null,"path":"/venka210","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/79661338?s=80&v=4"},"commit":{"message":"resolve conflicts","shortMessageHtmlLink":"resolve conflicts"}},{"before":"45dfc0ea918ed99c0e90a1843fbd0da0e8894f98","after":"bc2ba796201b99ac17b01518bcd06e28983d7fb0","ref":"refs/heads/main","pushedAt":"2023-06-12T22:19:03.653Z","pushType":"push","commitsCount":1,"pusher":{"login":"pjaml","name":"Peter Lutz","path":"/pjaml","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/69218159?s=80&v=4"},"commit":{"message":"doc: explain how to use git branches","shortMessageHtmlLink":"doc: explain how to use git branches"}},{"before":"fea76195769d8827d3a4c5ccbc6451acbf06e9fb","after":"45dfc0ea918ed99c0e90a1843fbd0da0e8894f98","ref":"refs/heads/main","pushedAt":"2023-06-12T22:11:39.393Z","pushType":"push","commitsCount":1,"pusher":{"login":"pjaml","name":"Peter Lutz","path":"/pjaml","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/69218159?s=80&v=4"},"commit":{"message":"doc: explain how to use git branches","shortMessageHtmlLink":"doc: explain how to use git branches"}},{"before":"455be3a2095bbc869361ced626d0d1dadf73ae2b","after":"fea76195769d8827d3a4c5ccbc6451acbf06e9fb","ref":"refs/heads/main","pushedAt":"2023-06-12T21:51:38.372Z","pushType":"push","commitsCount":1,"pusher":{"login":"pjaml","name":"Peter Lutz","path":"/pjaml","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/69218159?s=80&v=4"},"commit":{"message":"doc: explain how to use git branches","shortMessageHtmlLink":"doc: explain how to use git branches"}},{"before":"bbe6310da9a8706f631ee0daf76ee41b2cd208f9","after":"455be3a2095bbc869361ced626d0d1dadf73ae2b","ref":"refs/heads/main","pushedAt":"2023-06-12T19:53:59.555Z","pushType":"push","commitsCount":1,"pusher":{"login":"pjaml","name":"Peter Lutz","path":"/pjaml","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/69218159?s=80&v=4"},"commit":{"message":"doc: remove mention of phenotypes for F1 & F2","shortMessageHtmlLink":"doc: remove mention of phenotypes for F1 & F2"}},{"before":"c98357a1fec214facbc880f27cd9545a31a7aed3","after":"bbe6310da9a8706f631ee0daf76ee41b2cd208f9","ref":"refs/heads/main","pushedAt":"2023-06-12T18:41:44.938Z","pushType":"push","commitsCount":3,"pusher":{"login":"pjaml","name":"Peter Lutz","path":"/pjaml","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/69218159?s=80&v=4"},"commit":{"message":"doc: update F1 and F2 ODEs to simpler form","shortMessageHtmlLink":"doc: update F1 and F2 ODEs to simpler form"}},{"before":"301f86e7c81a2f96d95596d12dcee886aa06812e","after":"c98357a1fec214facbc880f27cd9545a31a7aed3","ref":"refs/heads/main","pushedAt":"2023-06-05T21:42:33.373Z","pushType":"push","commitsCount":1,"pusher":{"login":"pjaml","name":"Peter Lutz","path":"/pjaml","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/69218159?s=80&v=4"},"commit":{"message":"fix: lower alphaPF1 & alphaPF2\n\nP now receives low, but nonzero, benefits from F1 and F2","shortMessageHtmlLink":"fix: lower alphaPF1 & alphaPF2"}},{"before":"471db832184611c928b11e693bc645a03fc0ce17","after":"301f86e7c81a2f96d95596d12dcee886aa06812e","ref":"refs/heads/main","pushedAt":"2023-06-05T21:32:52.117Z","pushType":"push","commitsCount":1,"pusher":{"login":"pjaml","name":"Peter Lutz","path":"/pjaml","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/69218159?s=80&v=4"},"commit":{"message":"refactor: simplify ODEs and remove unused params","shortMessageHtmlLink":"refactor: simplify ODEs and remove unused params"}},{"before":"17c2eadb9883493164b6d63dd7677ba5319c006c","after":"471db832184611c928b11e693bc645a03fc0ce17","ref":"refs/heads/main","pushedAt":"2023-06-05T21:28:47.217Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"pjaml","name":"Peter Lutz","path":"/pjaml","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/69218159?s=80&v=4"},"commit":{"message":"docs: create more hierarchy in README","shortMessageHtmlLink":"docs: create more hierarchy in README"}},{"before":"8a50c10518a451a55ec04df259f894bd679c7feb","after":"17c2eadb9883493164b6d63dd7677ba5319c006c","ref":"refs/heads/main","pushedAt":"2023-05-08T20:43:27.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"venka210","name":null,"path":"/venka210","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/79661338?s=80&v=4"},"commit":{"message":"edit 3","shortMessageHtmlLink":"edit 3"}},{"before":"61d4f6731ec0bb6ec3b27f7d495af2f994289733","after":"8a50c10518a451a55ec04df259f894bd679c7feb","ref":"refs/heads/main","pushedAt":"2023-05-08T20:22:09.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"venka210","name":null,"path":"/venka210","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/79661338?s=80&v=4"},"commit":{"message":"2nd edit","shortMessageHtmlLink":"2nd edit"}},{"before":"471db832184611c928b11e693bc645a03fc0ce17","after":"61d4f6731ec0bb6ec3b27f7d495af2f994289733","ref":"refs/heads/main","pushedAt":"2023-05-08T20:18:11.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"venka210","name":null,"path":"/venka210","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/79661338?s=80&v=4"},"commit":{"message":"Update simMutualism.m\n\n1st edit","shortMessageHtmlLink":"Update simMutualism.m"}},{"before":"dd29b5b1a5b9f86eb92d84b5973fa81b5c8187e8","after":"471db832184611c928b11e693bc645a03fc0ce17","ref":"refs/heads/main","pushedAt":"2023-05-08T19:25:03.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"pjaml","name":"Peter Lutz","path":"/pjaml","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/69218159?s=80&v=4"},"commit":{"message":"docs: create more hierarchy in README","shortMessageHtmlLink":"docs: create more hierarchy in README"}},{"before":"f27feac2ff9b2a3b8c0daf0a46524d87a964b659","after":"dd29b5b1a5b9f86eb92d84b5973fa81b5c8187e8","ref":"refs/heads/main","pushedAt":"2023-05-08T19:22:26.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"pjaml","name":"Peter Lutz","path":"/pjaml","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/69218159?s=80&v=4"},"commit":{"message":"docs: update README with starting instructions","shortMessageHtmlLink":"docs: update README with starting instructions"}},{"before":"58a1c7b84fed5426f97bb9d16f273eeee8a72035","after":"f27feac2ff9b2a3b8c0daf0a46524d87a964b659","ref":"refs/heads/main","pushedAt":"2023-05-08T17:02:21.000Z","pushType":"push","commitsCount":3,"pusher":{"login":"pjaml","name":"Peter Lutz","path":"/pjaml","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/69218159?s=80&v=4"},"commit":{"message":"feat: add docs for plotFinalPopSpace","shortMessageHtmlLink":"feat: add docs for plotFinalPopSpace"}},{"before":"3c040aa8dece269b442dbca115e2a1b43b1e0971","after":"58a1c7b84fed5426f97bb9d16f273eeee8a72035","ref":"refs/heads/main","pushedAt":"2023-04-25T01:02:07.000Z","pushType":"push","commitsCount":4,"pusher":{"login":"pjaml","name":"Peter Lutz","path":"/pjaml","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/69218159?s=80&v=4"},"commit":{"message":"nit: change default maxIterations and ss threshold","shortMessageHtmlLink":"nit: change default maxIterations and ss threshold"}},{"before":"e9c93840a33bbf585a4648f1695c34ba9042c3bc","after":"3c040aa8dece269b442dbca115e2a1b43b1e0971","ref":"refs/heads/main","pushedAt":"2023-04-25T00:58:09.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"pjaml","name":"Peter Lutz","path":"/pjaml","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/69218159?s=80&v=4"},"commit":{"message":"fix: make plots look nicer","shortMessageHtmlLink":"fix: make plots look nicer"}},{"before":"dc0fdbd7a9e11d06b839d2dde35dac7d015396bc","after":"e9c93840a33bbf585a4648f1695c34ba9042c3bc","ref":"refs/heads/main","pushedAt":"2023-04-12T04:19:05.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"pjaml","name":"Peter Lutz","path":"/pjaml","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/69218159?s=80&v=4"},"commit":{"message":"fix: switch heatmap to pcolor for plotOutcomes\n\nThe pcolor plot is easier to modify than heatmap.\n\nOther changes:\n- plot is now square\n- includes legend\n- better colors\n- better axes labels","shortMessageHtmlLink":"fix: switch heatmap to pcolor for plotOutcomes"}},{"before":"c8184afa04d4985a0650489a26123d7ce2672db4","after":"dc0fdbd7a9e11d06b839d2dde35dac7d015396bc","ref":"refs/heads/main","pushedAt":"2023-04-12T02:03:34.000Z","pushType":"push","commitsCount":3,"pusher":{"login":"pjaml","name":"Peter Lutz","path":"/pjaml","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/69218159?s=80&v=4"},"commit":{"message":"fix: error message when maxIteration is reached","shortMessageHtmlLink":"fix: error message when maxIteration is reached"}},{"before":"8ee56757eedf54d054e85d6354eb6a423975ed01","after":"c8184afa04d4985a0650489a26123d7ce2672db4","ref":"refs/heads/main","pushedAt":"2023-04-10T16:43:07.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"pjaml","name":"Peter Lutz","path":"/pjaml","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/69218159?s=80&v=4"},"commit":{"message":"fix: decrease sigma_sq to fix issue with sims\n\nCertain simulations are not finishing, I'm attempting to fix this by\ndecreasing the value of sigma_sq from 0.25 to 0.05","shortMessageHtmlLink":"fix: decrease sigma_sq to fix issue with sims"}},{"before":"ba82549240a32a806cd60de24e1a4517a777e3f2","after":"8ee56757eedf54d054e85d6354eb6a423975ed01","ref":"refs/heads/main","pushedAt":"2023-04-10T16:42:12.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"pjaml","name":"Peter Lutz","path":"/pjaml","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/69218159?s=80&v=4"},"commit":{"message":"fix: remove message about saving outcomes plot","shortMessageHtmlLink":"fix: remove message about saving outcomes plot"}},{"before":"b502c982aa7e92bd8b3fb73daa9394d0d62051e5","after":"ba82549240a32a806cd60de24e1a4517a777e3f2","ref":"refs/heads/main","pushedAt":"2023-04-05T05:18:08.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"pjaml","name":"Peter Lutz","path":"/pjaml","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/69218159?s=80&v=4"},"commit":{"message":"fix: add steadyStateThreshold to matfile export","shortMessageHtmlLink":"fix: add steadyStateThreshold to matfile export"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAADcgXHBgA","startCursor":null,"endCursor":null}},"title":"Activity ยท pjaml/simMutualism"}