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staden_io_lib start from scratch

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pjotrp committed Jan 25, 2010
1 parent 3d0b487 commit f78056bb48dfc407adc9c9418efa3ce57bc58ded
Showing with 1 addition and 32,311 deletions.
  1. +1 −1 src/clibs/CMakeLists.txt
  2. +0 −1,263 src/clibs/staden_io_lib/CHANGES
  3. +0 −59 src/clibs/staden_io_lib/COPYRIGHT
  4. +0 −3,206 src/clibs/staden_io_lib/ChangeLog
  5. +0 −100 src/clibs/staden_io_lib/README
  6. +0 −60 src/clibs/staden_io_lib/io_lib/CMakeLists.txt
  7. +0 −578 src/clibs/staden_io_lib/io_lib/Read.c
  8. +0 −342 src/clibs/staden_io_lib/io_lib/Read.h
  9. +0 −34 src/clibs/staden_io_lib/io_lib/abi.h
  10. +0 −35 src/clibs/staden_io_lib/io_lib/alf.h
  11. +0 −145 src/clibs/staden_io_lib/io_lib/array.c
  12. +0 −93 src/clibs/staden_io_lib/io_lib/array.h
  13. +0 −584 src/clibs/staden_io_lib/io_lib/compress.c
  14. +0 −112 src/clibs/staden_io_lib/io_lib/compress.h
  15. +0 −2,503 src/clibs/staden_io_lib/io_lib/compression.c
  16. +0 −447 src/clibs/staden_io_lib/io_lib/compression.h
  17. +0 −1,436 src/clibs/staden_io_lib/io_lib/ctfCompress.c
  18. +0 −2,282 src/clibs/staden_io_lib/io_lib/deflate_interlaced.c
  19. +0 −116 src/clibs/staden_io_lib/io_lib/deflate_interlaced.h
  20. +0 −40 src/clibs/staden_io_lib/io_lib/error.c
  21. +0 −29 src/clibs/staden_io_lib/io_lib/error.h
  22. +0 −1,251 src/clibs/staden_io_lib/io_lib/expFileIO.c
  23. +0 −345 src/clibs/staden_io_lib/io_lib/expFileIO.h
  24. +0 −192 src/clibs/staden_io_lib/io_lib/files.c
  25. +0 −103 src/clibs/staden_io_lib/io_lib/find.c
  26. +0 −71 src/clibs/staden_io_lib/io_lib/fpoint.c
  27. +0 −28 src/clibs/staden_io_lib/io_lib/fpoint.h
  28. +0 −1,385 src/clibs/staden_io_lib/io_lib/hash_table.c
  29. +0 −147 src/clibs/staden_io_lib/io_lib/hash_table.h
  30. +0 −987 src/clibs/staden_io_lib/io_lib/jenkins_lookup3.c
  31. +0 −22 src/clibs/staden_io_lib/io_lib/jenkins_lookup3.h
  32. +0 −558 src/clibs/staden_io_lib/io_lib/mFILE.c
  33. +0 −57 src/clibs/staden_io_lib/io_lib/mFILE.h
  34. +0 −255 src/clibs/staden_io_lib/io_lib/mach-io.c
  35. +0 −140 src/clibs/staden_io_lib/io_lib/mach-io.h
  36. +0 −114 src/clibs/staden_io_lib/io_lib/misc.h
  37. +0 −282 src/clibs/staden_io_lib/io_lib/misc_scf.c
  38. +0 −1,151 src/clibs/staden_io_lib/io_lib/open_trace_file.c
  39. +0 −38 src/clibs/staden_io_lib/io_lib/open_trace_file.h
  40. +0 −469 src/clibs/staden_io_lib/io_lib/os.h
  41. +0 −36 src/clibs/staden_io_lib/io_lib/plain.h
  42. +0 −282 src/clibs/staden_io_lib/io_lib/read_alloc.c
  43. +0 −448 src/clibs/staden_io_lib/io_lib/read_scf.c
  44. +0 −447 src/clibs/staden_io_lib/io_lib/scf.h
  45. +0 −241 src/clibs/staden_io_lib/io_lib/scf_extras.c
  46. +0 −31 src/clibs/staden_io_lib/io_lib/scf_extras.h
  47. +0 −957 src/clibs/staden_io_lib/io_lib/seqIOABI.c
  48. +0 −155 src/clibs/staden_io_lib/io_lib/seqIOABI.h
  49. +0 −424 src/clibs/staden_io_lib/io_lib/seqIOALF.c
  50. +0 −88 src/clibs/staden_io_lib/io_lib/seqIOCTF.c
  51. +0 −32 src/clibs/staden_io_lib/io_lib/seqIOCTF.h
  52. +0 −263 src/clibs/staden_io_lib/io_lib/seqIOPlain.c
  53. +0 −377 src/clibs/staden_io_lib/io_lib/sff.c
  54. +0 −87 src/clibs/staden_io_lib/io_lib/sff.h
  55. +0 −2,041 src/clibs/staden_io_lib/io_lib/srf.c
  56. +0 −181 src/clibs/staden_io_lib/io_lib/srf.h
  57. +0 −74 src/clibs/staden_io_lib/io_lib/stdio_hack.h
  58. +0 −168 src/clibs/staden_io_lib/io_lib/strings.c
  59. +0 −56 src/clibs/staden_io_lib/io_lib/tar_format.h
  60. +0 −240 src/clibs/staden_io_lib/io_lib/traceType.c
  61. +0 −84 src/clibs/staden_io_lib/io_lib/traceType.h
  62. +0 −1,005 src/clibs/staden_io_lib/io_lib/translate.c
  63. +0 −135 src/clibs/staden_io_lib/io_lib/translate.h
  64. +0 −357 src/clibs/staden_io_lib/io_lib/vlen.c
  65. +0 −15 src/clibs/staden_io_lib/io_lib/vlen.h
  66. +0 −461 src/clibs/staden_io_lib/io_lib/write_scf.c
  67. +0 −74 src/clibs/staden_io_lib/io_lib/xalloc.c
  68. +0 −33 src/clibs/staden_io_lib/io_lib/xalloc.h
  69. +0 −1,168 src/clibs/staden_io_lib/io_lib/ztr.c
  70. +0 −155 src/clibs/staden_io_lib/io_lib/ztr.h
  71. +0 −1,136 src/clibs/staden_io_lib/io_lib/ztr_translate.c
View
@@ -18,7 +18,7 @@ if (BLD_AFFYIO)
endif()
if (BLD_STADEN)
- add_subdirectory (staden_io_lib-1.11.6/io_lib)
+ add_subdirectory (staden_io_lib/src)
endif()
if (BLD_EMBOSS)
Oops, something went wrong.

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