The Planteome Project

Repositories

• CO_325-banana-traits

  Banana Trait Ontology maintained by Crop Ontology and Musabase
  Java 0 0 10 0 Updated Apr 8, 2021

• CO_334-cassava-traits

  Cassava Trait Ontology maintained by Crop Ontology and Cassavabase
  1 0 29 0 Updated Apr 7, 2021

• CO_330-potato-traits
  0 0 2 0 Updated Apr 7, 2021

• plant-trait-ontology

  Explore the Plant Trait Ontology on the Planteome site.
  Python 5 19 261 0 Updated Apr 6, 2021

• plant-ontology

  Repository for the Plant Ontology
  Makefile 10 26 102 2 Updated Apr 5, 2021

• CO_320-rice-traits
  0 2 6 2 Updated Apr 1, 2021

• amigo

  Forked from geneontology/amigo

  This repo is the Planteome fork of geneontology.org AmiGO2 project. Issues in this repo should be reported only on AmiGO issues. Issues can be pushed upstream if relevant for GO.
  JavaScript BSD-3-Clause 10 1 11 0 Updated Mar 29, 2021

• Ontology-Variable-Request-App
  Python 0 0 3 0 Updated Mar 23, 2021

• CO_337-groundnut-traits

  traits groundnut
  0 0 6 0 Updated Mar 23, 2021

• CO_336-soybean-traits

  crop ontology soybean traits
  0 0 0 0 Updated Mar 23, 2021

• CO_341-pigeonpea-traits
  0 0 1 0 Updated Mar 23, 2021

• CO_339-lentil-traits
  0 0 0 0 Updated Mar 23, 2021

• CO_322-maize-traits
  0 2 5 0 Updated Mar 22, 2021

• CO_350-oat-traits

  Oat trait dictionary developed by Crop Ontology, Oat Global, T3 and PepsiCO
  1 0 0 0 Updated Mar 22, 2021

• CO_324-sorghum-traits
  0 0 1 0 Updated Mar 22, 2021

• CO_366-bambara-goundnut-traits
  0 0 1 0 Updated Mar 22, 2021

• CO_331-sweetpotato-traits

  Sweetpotato Trait Ontology maintained by Crop Ontology and sweetpotatobase
  4 2 44 5 Updated Mar 19, 2021

• CO_321-wheat-traits
  2 3 7 2 Updated Mar 18, 2021

• plant-experimental-conditions-ontology

  Repository for the Plant Experimental Conditions Ontology
  Python 2 3 13 0 Updated Feb 22, 2021

• soybase-ontology
  Roff 0 2 2 0 Updated Feb 19, 2021

• go-site-xrefs-fork

  Forked from geneontology/go-site

  Use this to add xrefs to metadata/db-xrefs.yaml and submit a pull request. Then they will be in the global xref file that AmiGO2 uses. Before making any changes, you need to update the fork to be consistent with the GO version. Use "git fetch upstream, git merge upstream/master, git push.
  Python BSD-3-Clause 84 0 1 0 Updated Feb 9, 2021

• planteome-deep-segmenter-original
  Python 3 1 0 0 Updated Dec 14, 2020

• biolink-api

  Forked from biolink/biolink-api

  API for linked biological knowledge
  Python BSD-3-Clause 21 0 2 0 Updated Nov 9, 2020

• planteome-data-visualization

  Repository for the Data and Visualization working group
  XSLT 0 2 12 (1 issue needs help) 1 Updated Oct 29, 2020

• planteome-core

  Repository (and tracker) for a planteome.owl importer for the whole project
  Makefile 0 1 1 0 Updated Oct 19, 2020

• planteome-annotation-data

  This is a place to discuss issues around the Planteome annotation data and store useful scripts etc.
  Perl 0 1 12 0 Updated Sep 9, 2020

• planteome-ncbi-taxonomy
  Perl 0 1 1 0 Updated Aug 13, 2020

• plant-stress-ontology

  An ontology containing biotic and abiotic plant stresses. Part of the Planteome suite of reference ontologies. Formerly called the Ontology of Plant Stress
  Jupyter Notebook 5 7 5 0 Updated Aug 13, 2020

• curate_site

  Drupal site for curate.planteome.org
  PHP 0 0 0 0 Updated May 6, 2020

• CO_343-yam-traits
  1 1 5 0 Updated Mar 24, 2020