@Planteome

The Planteome Project

Home for the Common Reference Ontologies for Plants

Pinned repositories

  1. plant-ontology

    Repository for the Plant Ontology

    Makefile 17 6

  2. plant-trait-ontology

    Explore the Plant Trait Ontology on the Planteome site.

    Python 11 6

  3. plant-experimental-conditions-ontology

    Repository for the Plant Experimental Conditions Ontology

    Python 1 2

  • Sweetpotato Trait Ontology maintained by Crop Ontology and sweetpotatobase

    1 2 Updated Oct 22, 2018
  • Explore the Plant Trait Ontology on the Planteome site.

    Python 11 6 Updated Oct 20, 2018
  • Repository for the Plant Experimental Conditions Ontology

    Python 1 2 Updated Oct 18, 2018
  • Repository for the Plant Ontology

    Makefile 17 6 Updated Oct 15, 2018
  • This repo is the Planteome fork of geneontology.org AmiGO2 project. Issues in this repo should be reported only on AmiGO issues. Issues can be pushed upstream if relevant for GO.

    JavaScript 8 BSD-3-Clause Updated Oct 1, 2018
  • Repository (and tracker) for a planteome.owl importer for the whole project

    Makefile Updated Sep 11, 2018
  • Repository for the Data and Visualization working group

    HTML 1 1 issue needs help Updated Aug 24, 2018
  • Updated Aug 17, 2018
  • Cassava Trait Ontology maintained by Crop Ontology and Cassavabase

    Updated Aug 17, 2018
  • 1 Updated Aug 16, 2018
  • Updated Aug 15, 2018
  • 1 Updated Aug 15, 2018
  • Updated Aug 13, 2018
  • 1 Updated Jul 24, 2018
  • crop ontology soybean traits

    Updated Jul 23, 2018
  • Python 1 Updated Jul 12, 2018
  • This is a place to keep the files which are used for the various reference ontologies.

    Python Updated Jul 10, 2018
  • This is a place to store folders of results, and notes on analyses performed using the Planteome ontologies. Please collect the documents in a folder with an explicit name and date (e.g. fall-2015)

    Updated Jul 9, 2018
  • HTML Updated Jun 26, 2018
  • Desktop Python Tk application for manual annotation of whole plant images with basic PO and TO terms.

    Python Updated Jun 24, 2018
  • Python 1 1 Updated Jun 21, 2018
  • extracts plant trait data from open data sources like apsnet and ars-grin

    ASP 2 3 MIT Updated May 25, 2018
  • Python 1 3 Updated May 22, 2018
  • Repository for the Plant Disease Ontology

    1 2 Updated May 15, 2018
  • Perl Updated May 14, 2018
  • Examples of ontologies that can be extracted from the mappings of the COs and TO

    Updated May 13, 2018
  • Banana Trait Ontology maintained by Crop Ontology and Musabase

    Java Updated Apr 12, 2018
  • Updated Apr 9, 2018
  • Use this to add xrefs to metadata/db-xrefs.yaml and submit a pull request. Then they will be in the global xref file that AmiGO2 uses.

    Perl 69 BSD-3-Clause Updated Apr 4, 2018
  • An ontology containing plant stresses; biotic and abiotic. Part of the Planteome suite of reference ontologies.

    Jupyter Notebook 2 4 Updated Mar 9, 2018
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