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  • Updated Aug 31, 2016
  • Clustering utilities from Peter Kleiweg's website -- see http://www.let.rug.nl/~kleiweg/clustering/

    C Updated May 11, 2016
  • Cheat sheets (reference cards) for various programs

    TeX Updated Apr 3, 2016
  • Jupyter Notebook Updated Feb 27, 2016
  • A LaTeX class implementing the new NIH Biographical Sketch Format

    TeX 5 4 Updated Jan 26, 2016
  • Paul's public ipython notebooks

    Jupyter Notebook Updated Jan 13, 2016
  • LaTeX templates for various types of documents

    TeX 3 Updated May 6, 2015
  • A repository for the Duke BioHaskell Interest Group

    5 Updated Apr 2, 2015
  • My Emacs config files

    Emacs Lisp Updated Dec 15, 2014
  • Course repository for Bio 723

    TeX 1 1 Updated Nov 25, 2014
  • A simple command line note taking script written in Python.

    Python 3 1 Updated Oct 27, 2014
  • Introduction to Scientific Computing Workshop

    Python 7 Updated Sep 16, 2014
  • Python utilities for the Sequentix Cirklon sequencer

    Python 3 Updated Aug 9, 2014
  • Python Updated Jun 26, 2013
  • An introduction to Bayesian methods + probabilistic programming in data analysis with a computation/understanding-first, mathematics-second point of view. All in pure Python ;)

    Python 3,207 Updated Feb 22, 2013
  • JavaScript Updated Feb 8, 2013
  • my .vim folder including .vimrc

    VimL 1 Updated Jan 19, 2013
  • Notes on my attempts to wrap my head around Emacs

    1 Updated Oct 23, 2012
  • OLD Course repository for Bio 313 -- See Bio 723

    R 9 2 Updated Sep 1, 2012
  • My emacs config files

    Emacs Lisp 1 Updated Mar 12, 2012
  • Various code tools for common bioinformatics tasks

    Python 1 Updated Dec 21, 2011
  • 1 Updated Nov 27, 2011
  • Notes about why biologists might want to use LaTeX for preparing scientific documents

    3 1 Updated Nov 14, 2011
  • A fork of dot2texi with bug fixes

    1 Updated Oct 20, 2011
  • my .pandoc directory

    1 Updated Sep 26, 2011
  • A simple python script to convert GitHub flavored markdown to Pandoc flavored markdown

    Python 4 1 Updated Sep 5, 2011
  • A variety of nice Beamer themes collected from across the web

    4 4 Updated Aug 29, 2011
  • a python snippet for `folding' a text file with YAML`documents' into lines

    Python 1 1 Updated Aug 28, 2011
  • An elisp module that allows you to export orgmode files to markdown.

    Emacs Lisp 21 Updated Aug 13, 2010