Computational Mass Spectrometry @ Pacific Northwest National Laboratory
- 91 followers
- Richland, WA
- https://omics.pnl.gov/software/
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Thermo-Raw-File-Reader
Thermo-Raw-File-Reader Public.NET DLL wrapper for reading Thermo .Raw files. Uses ThermoFisher.CommonCore NuGet packages provided by Thermo Fisher Scientific
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Informed-Proteomics
Informed-Proteomics PublicTop down / bottom up, MS/MS analysis tool for DDA and DIA mass spectrometry data
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DeconTools
DeconTools PublicUsed to deisotope mass spectra and to detect features from mass spectrometry data using observed isotopic signatures.
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DB-Schema-Export-Tool
DB-Schema-Export-Tool PublicExports SQL Server and Postgres database objects as schema files. Exported objects include tables, views, stored procedures, and functions, plus also database properties including database roles an…
Repositories
- PSI-Interface Public
C# reader/writer for mzIdentML files (.mzID). Also supports reading mzML files.
PNNL-Comp-Mass-Spec/PSI-Interface’s past year of commit activity - DMS-Organism-Database-Handler Public
Organism Database (FASTA file) programs, including PRISMSeq Uploader and the FastaFileMaker console application
PNNL-Comp-Mass-Spec/DMS-Organism-Database-Handler’s past year of commit activity - DB-Schema-Export-Tool Public
Exports SQL Server and Postgres database objects as schema files. Exported objects include tables, views, stored procedures, and functions, plus also database properties including database roles and logins. The program can also export table data to create SQL files with an Insert Into statement for each row.
PNNL-Comp-Mass-Spec/DB-Schema-Export-Tool’s past year of commit activity