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2000-Moulton-RNA-Folding-Argues-Against-a-Hot-Start-Origin-of-Life.pdf
2003-Edvardsson-A-search-for-H-ACA-snoRNAs-in-yeast-using-MFE-secondary-structure-prediction.pdf
2003-Gardner-Optimal-alphabets-for-an-RNA-world.pdf
2003-Gardner-thesis-Simulating_the_RNA-world_and_Computational_Ribonomics.pdf
2003-Rakonjac-Sequence-Diversity-and-Functional-Conservation-of-the-Origin-of-Replication-in-Lactococcal-Prolate-Phages.pdf
2004-Gardner-A-comprehensive-comparison-of-comparative-RNA-structure-prediction-approaches.pdf
2005-Freyhult-Predicting-RNA-Structure-Using-MI.pdf
2005-Freyhult-a-comparison-of-folding-measures.pdf
2005-Gardner-A-benchmark-of-multiple-sequence-alignment-programs-upon-structural-RNAs.pdf
2006-Lindgreen-Measuring-covariation-in-RNA-alignments-physical-realism-improves-information-measures.pdf
2006-Munch-A-hidden-Markov-model-approach-for-determining-expression-from-genomic-tiling-micro-arrays.pdf
2006-Vinther-Identification-of-miRNA-targets-with-stable-isotope.pdf
2007-Bollback-Estimating-the-history-of-mutations-on-a-phylogeny.pdf
2007-Freyhult-Exploring-genomic-dark-matter-A-critical-assessment-of-the-performance-of-homology-search-methods-on-noncoding-RNA.pdf
2007-Lindgreen-MASTR-multiple-alignment-and-structure-prediction-of-non-coding-RNAs-using-simulated-annealing.pdf
2007-Weile-Use-of-tiling-array-data-and-RNA-secondary-structure-predictions-to-identify-noncoding-RNA-genes.pdf
2008-Daub-The-RNA-WikiProject-Community-annotation-of-RNA-families.pdf
2008-Gardner-Mutation-of-miRNA-target-sequences-during-human-evolution.pdf
2008-Mourier-Genome-wide-discovery-and-verification-of-novel-structured-RNAs-in-Plasmodium-falciparum.pdf
2009-Gardner-A-home-for-RNA-families-at-RNA-Biology.pdf
2009-Gardner-Rfam-updates-to-the-RNA-families-database.pdf
2009-Gardner-The-use-of-covariance-models-to-annotate-RNAs-in-whole-genomes.pdf
2009-Perkins-A-Strand-Specific-RNA-Seq-Analysis-of-the-Transcriptome-of-the-Typhoid-Bacillus-Salmonella-Typhi.pdf
2010-Gardner-SnoPatrol-how-many-snoRNA-genes-are-there.pdf
2010-Logan-Ten-simple-rules-for-editing-Wikipedia.pdf
2010-Nygaard-Long-and-short-term-selective-forces-on-malaria-parasite-genomes.pdf
2011-Bateman-RNAcentral-a-vision-for-an-international-database-of-RNA-sequences.pdf
2011-Chaudhury-Quantitative-RNA-seq-analysis-of-the-Campylobacter-jejuni-transcriptome.pdf
2011-Gardner-RNIE-genome-wide-prediction-of-bacterial-intrinsic-terminators.pdf
2011-Gardner-Rfam-Wikipedia-clans-and-the-decimal-release.pdf
2011-Stevens-Two-covariance-models-for-iron-responsive-elements.pdf
2012-Finn-Making-your-database-available-through-Wikipedia-the-pros-and-cons.pdf
2012-Gardner-Three-years-of-RNA-Families.pdf
2012-Hoeppner-Comparative-analysis-of-RNA-families-reveals-distinct-repertoires-for-each-domain-of-life.pdf
2012-McKenzie-A-VapBC-Toxin-Antitoxin-Module-is-a-Post-Transcriptional-Regulator-of-Metabolic-Flux-in-Mycobacteria.pdf
2012-Widmann-RNASTAR-an-RNA-STructural-Alignment-Repository-that-provides-insight-into-the-evolution-of-natural-and-artificial-RNAs.pdf
2013-Barquist-A-comparison-of-dense-transposon-insertion-libraries-in-the-Salmonella-serovars-Typhi-and-Typhimurium.pdf
2013-Burge-Rfam-11-0-10-years-of-RNA-families.pdf
2013-Kingsley-Genome-and-transcriptome-adaptation-accompanying-emergence-of-the-definitive-type-2-host-restricted-Salmonella-enterica-serovar-Typhimurium-pathovar.pdf
2014-Lindgreen-Robust-identification-of-noncoding-RNA-from-transcriptomes-requires-phylogenetically-informed-sampling.pdf
2014-Tang-Molecular-characterization-of-a-new-member-of-the-lariat-capping-twin-ribozyme-introns.pdf
2014-Zhang-Comparative-genomic-data-of-the-Avian-Phylogenomics-Project.pdf
2014-Zhang-Comparative-genomics-reveals-insights-into-avian-genome-evolution-and-adaptation.pdf
2015-Gardner-Annotating-RNA-motifs-in-sequences-and-alignments.pdf
2015-Gardner-Conservation-and-Losses-of-Non-Coding-RNAs-in-Avian-Genomes.pdf
2015-Nawrocki-Rfam-12-0-updates-to-the-RNA-families-database.pdf
2015-Schmid-Third-Report-on-Chicken-Genes-and-Chromosomes-2015.pdf
2015-Waldispuhl-Crowdsourcing-RNA-structural-alignments-with-an-online-computer-game.pdf
2016-Barquist-Studying-RNA-Homology-and-Conservation-with-Infernal-From-Single-Sequences-to-RNA-Families.pdf
2016-Coray-Why-so-narrow-Distribution-of-anti-sense-regulated-type-I-toxin-antitoxin-systems.pdf
2016-Lindgreen-An-evaluation-of-the-accuracy-and-speed-of-metagenome-analysis-tools.pdf
2016-Umu-Avoidance-of-stochastic-RNA-interactions.pdf
2016-Wheeler-A-profile-based-method-for-identifying-functional-divergence-of-orthologous-genes-in-bacterial-genomes.pdf
2017-Osborne-Complete-Genome-Sequences-of-Two-Geographically-Distinct-Legionella-micdadei-Clinical-Isolates.pdf
2017-Ren-Genomic-Transcriptomic-and-Phenotypic-Analyses-of-Neisseria-meningitidis-Isolates-from-Disease-Patients-and-Their-Household-Contacts.pdf
2017-Umu-A-comprehensive-benchmark-of-RNA-RNA-interaction-prediction-tools-for-all-domains-of-life.pdf
2017-Wu-Analysis-of-the-genome-of-the-New-Zealand-giant-collembolan-Holacanthella-duospinosa-sheds-light-on-hexapod-evolution.pdf
2018-Dickie-Towards-robust-and-repeatable-sampling-methods-in-eDNA-based-studies.pdf
2018-Hoeppner-An-evaluation-of-function-of-multicopy-non-coding-RNAs-in-mammals-using-ENCODE-FANTOM-data-and-comparative-genomics.pdf
2018-Wheeler-Machine-learning-identifies-signatures-of-host-adaptation-in-the-bacterial-pathogen-Salmonella-enterica.pdf
2019-Gardner-Identifying-accurate-metagenome-and-amplicon-software-via-a-meta-analysis-of-benchmarking-studies.pdf
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