diff --git a/.ci_support/environment.yml b/.ci_support/environment.yml
index aba028944..94a73ba6b 100644
--- a/.ci_support/environment.yml
+++ b/.ci_support/environment.yml
@@ -1,15 +1,15 @@
 channels:
 - conda-forge
 dependencies:
-- aimsgb =0.1.2
+- aimsgb =0.1.3
 - ase =3.22.1
 - coveralls
 - coverage
 - codacy-coverage
 - matplotlib-base =3.7.1
 - numpy =1.24.3
-- phonopy =2.19.0
-- pymatgen =2023.5.10
+- phonopy =2.19.1
+- pymatgen =2023.5.31
 - pyscal =2.10.18
 - scikit-learn =1.2.2
 - scipy =1.10.1
diff --git a/setup.py b/setup.py
index e94bf90fc..0d034a3d4 100644
--- a/setup.py
+++ b/setup.py
@@ -36,14 +36,14 @@
         'scipy==1.10.1',  # ase already requires scipy
     ],
     extras_require={
-        "grainboundary": ['aimsgb==0.1.2', 'pymatgen==2023.5.10'],
+        "grainboundary": ['aimsgb==0.1.3', 'pymatgen==2023.5.31'],
         "pyscal": ['pyscal2==2.10.18'],
-        "nglview": ['nglview==3.0.4'],
+        "nglview": ['nglview==3.0.5'],
         "plotly": ['plotly==5.14.1'],
         "clusters": ['scikit-learn==1.2.2'],
         "symmetry": ['spglib==2.0.2'],
-        "surface": ['spglib==2.0.2', 'pymatgen==2023.5.10'],
-        "phonopy": ['phonopy==2.19.0', 'spglib==2.0.2'],
+        "surface": ['spglib==2.0.2', 'pymatgen==2023.5.31'],
+        "phonopy": ['phonopy==2.19.1', 'spglib==2.0.2'],
     },
     cmdclass=versioneer.get_cmdclass(),
 )