From 7c8cd1582866ae97ff47742d4069845369d8d890 Mon Sep 17 00:00:00 2001 From: Christopher Fonnesbeck Date: Sun, 1 Jan 2017 22:32:08 -0600 Subject: [PATCH 1/2] Reverted c0351c19 and clarified reference to varnames element --- pymc3/backends/sqlite.py | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/pymc3/backends/sqlite.py b/pymc3/backends/sqlite.py index 618b6e3bcb5..65561dae452 100644 --- a/pymc3/backends/sqlite.py +++ b/pymc3/backends/sqlite.py @@ -148,8 +148,8 @@ def record(self, point): values = (self.draw_idx, self.chain) + tuple(np.ravel(value)) self._queue[varname].append(values) - if len(self._queue[varname]) > self._queue_limit: - self._execute_queue() + if len(self._queue[self.varnames[0]]) > self._queue_limit: + self._execute_queue() self.draw_idx += 1 def _execute_queue(self): From 4953515775e6ad5fb3a2a021fae4940c1cc3c8ce Mon Sep 17 00:00:00 2001 From: Osvaldo Martin Date: Fri, 6 Jan 2017 17:53:21 -0300 Subject: [PATCH 2/2] auto-scale the max value of y when njobs > 1 (#1648) --- pymc3/plots.py | 4 +--- 1 file changed, 1 insertion(+), 3 deletions(-) diff --git a/pymc3/plots.py b/pymc3/plots.py index f10a69db129..6fb518b4043 100644 --- a/pymc3/plots.py +++ b/pymc3/plots.py @@ -104,7 +104,7 @@ def traceplot(trace, varnames=None, transform=lambda x: x, figsize=None, lw=1.5, alpha=alpha) except KeyError: pass - + ax[i, 0].set_ylim(ymin=0) plt.tight_layout() return ax @@ -132,8 +132,6 @@ def kdeplot_op(ax, data, prior=None, prior_alpha=1, prior_style='--'): ax.plot(x, density) - ax.set_ylim(ymin=0) - def make_2d(a): """Ravel the dimensions after the first.