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Recently hitting consistent timeout (pexpect.exceptions.TIMEOUT), looking for a coherent output. #4424

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vityas opened this issue Aug 14, 2020 · 1 comment · Fixed by #4425

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@vityas
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vityas commented Aug 14, 2020

Hey folks, recently, pipenv has been quite unreliable. and while some issues can be done away by clearing cache && hours of debugging, but this one is really driving me crazy.

Issue description

pipenv lock times out for an unknown reason. I'm installing around 200 packages.
why do I call it a bug?

  1. because pipenv --verbose should give some insight on what package is actually timing out. Does someone know how can we hack ourway to see what specific package is timing out ??
  2. installing the first 100 packages works fine and the second half works fine too. clearly a mess up here.

Expected result

(first of all I expect the lock to succeed)

  • I expect --verbose mode to print out the logs as the events were happening, not just the error

Actual result

verbose mode is identical to non-verbose mode

Steps to replicate

that's easy. take any Pipfile. say like that:

[packages] 
urllib3 = "==1.25.10"

and lets just force timeout by reducing the wait time to 1 second, if your internet is fast pick a bigger package

export PIPENV_INSTALL_TIMEOUT=1
pipenv lock -v

nothing in that log will tell you about what you need

pipenv lock -v

Locking [dev-packages] dependencies…
Locking [packages] dependencies…
Building requirements...
Resolving dependencies...
Traceback (most recent call last):
File "/usr/local/Cellar/pipenv/2020.8.13/libexec/bin/pipenv", line 8, in
sys.exit(cli())
File "/usr/local/Cellar/pipenv/2020.8.13/libexec/lib/python3.8/site-packages/pipenv/vendor/click/core.py", line 829, in call
return self.main(*args, **kwargs)
File "/usr/local/Cellar/pipenv/2020.8.13/libexec/lib/python3.8/site-packages/pipenv/vendor/click/core.py", line 782, in main
rv = self.invoke(ctx)
File "/usr/local/Cellar/pipenv/2020.8.13/libexec/lib/python3.8/site-packages/pipenv/vendor/click/core.py", line 1259, in invoke
return _process_result(sub_ctx.command.invoke(sub_ctx))
File "/usr/local/Cellar/pipenv/2020.8.13/libexec/lib/python3.8/site-packages/pipenv/vendor/click/core.py", line 1066, in invoke
return ctx.invoke(self.callback, **ctx.params)
File "/usr/local/Cellar/pipenv/2020.8.13/libexec/lib/python3.8/site-packages/pipenv/vendor/click/core.py", line 610, in invoke
return callback(*args, **kwargs)
File "/usr/local/Cellar/pipenv/2020.8.13/libexec/lib/python3.8/site-packages/pipenv/vendor/click/decorators.py", line 73, in new_func
return ctx.invoke(f, obj, *args, **kwargs)
File "/usr/local/Cellar/pipenv/2020.8.13/libexec/lib/python3.8/site-packages/pipenv/vendor/click/core.py", line 610, in invoke
return callback(*args, **kwargs)
File "/usr/local/Cellar/pipenv/2020.8.13/libexec/lib/python3.8/site-packages/pipenv/vendor/click/decorators.py", line 21, in new_func
return f(get_current_context(), *args, **kwargs)
File "/usr/local/Cellar/pipenv/2020.8.13/libexec/lib/python3.8/site-packages/pipenv/cli/command.py", line 368, in lock
do_lock(
File "/usr/local/Cellar/pipenv/2020.8.13/libexec/lib/python3.8/site-packages/pipenv/core.py", line 1102, in do_lock
venv_resolve_deps(
File "/usr/local/Cellar/pipenv/2020.8.13/libexec/lib/python3.8/site-packages/pipenv/utils.py", line 1323, in venv_resolve_deps
c = resolve(cmd, sp)
File "/usr/local/Cellar/pipenv/2020.8.13/libexec/lib/python3.8/site-packages/pipenv/utils.py", line 1136, in resolve
result = c.expect(u"\n", timeout=environments.PIPENV_INSTALL_TIMEOUT)
File "/usr/local/Cellar/pipenv/2020.8.13/libexec/lib/python3.8/site-packages/pipenv/vendor/delegator.py", line 215, in expect
self.subprocess.expect(pattern=pattern, timeout=timeout)
File "/usr/local/Cellar/pipenv/2020.8.13/libexec/lib/python3.8/site-packages/pipenv/vendor/pexpect/spawnbase.py", line 343, in expect
return self.expect_list(compiled_pattern_list,
File "/usr/local/Cellar/pipenv/2020.8.13/libexec/lib/python3.8/site-packages/pipenv/vendor/pexpect/spawnbase.py", line 372, in expect_list
return exp.expect_loop(timeout)
File "/usr/local/Cellar/pipenv/2020.8.13/libexec/lib/python3.8/site-packages/pipenv/vendor/pexpect/expect.py", line 181, in expect_loop
return self.timeout(e)
File "/usr/local/Cellar/pipenv/2020.8.13/libexec/lib/python3.8/site-packages/pipenv/vendor/pexpect/expect.py", line 144, in timeout
raise exc
pexpect.exceptions.TIMEOUT: <pexpect.popen_spawn.PopenSpawn object at 0x10c747520>
searcher: searcher_re:
0: re.compile('\n')
<pexpect.popen_spawn.PopenSpawn object at 0x10c747520>
searcher: searcher_re:
0: re.compile('\n')

-------------------------------------------------------------------------------
$ pipenv --support

Pipenv version: '2020.8.13'

Pipenv location: '/usr/local/Cellar/pipenv/2020.8.13/libexec/lib/python3.8/site-packages/pipenv'

Python location: '/usr/local/Cellar/pipenv/2020.8.13/libexec/bin/python3.8'

Python installations found:

  • 3.8.5: /usr/local/bin/python3.8
  • 3.8.2: /usr/bin/python3
  • 3.7.8: /usr/local/bin/python3
  • 3.7.8: /usr/local/bin/python3.7m
  • 3.7.8: /usr/local/bin/python3.7
  • 3.6.7: /usr/local/bin/python3.6
  • 3.6.7: /usr/local/bin/python3.6m
  • 3.6.4: /Users/vitya/.pyenv/versions/3.6.4/bin/python3
  • 3.6.2: /Users/vitya/.pyenv/versions/3.6.2/bin/python3
  • 2.7.16: /usr/bin/python2
  • 2.7.16: /usr/bin/python2.7

PEP 508 Information:

{'implementation_name': 'cpython',
 'implementation_version': '3.8.5',
 'os_name': 'posix',
 'platform_machine': 'x86_64',
 'platform_python_implementation': 'CPython',
 'platform_release': '19.6.0',
 'platform_system': 'Darwin',
 'platform_version': 'Darwin Kernel Version 19.6.0: Thu Jun 18 20:49:00 PDT '
                     '2020; root:xnu-6153.141.1~1/RELEASE_X86_64',
 'python_full_version': '3.8.5',
 'python_version': '3.8',
 'sys_platform': 'darwin'}

System environment variables:

  • PATH
  • GREP_COLOR
  • TERM_PROGRAM
  • PYENV_ROOT
  • NVM_CD_FLAGS
  • SHELL
  • TERM
  • GIT_PROMPT_FETCH_REMOTE_STATUS
  • HISTSIZE
  • CLICOLOR
  • TMPDIR
  • TERM_PROGRAM_VERSION
  • TERM_SESSION_ID
  • OBJC_DISABLE_INITIALIZE_FORK_SAFETY
  • USER
  • HISTFILESIZE
  • NVM_DIR
  • PIPENV_IGNORE_VIRTUALENVS
  • COMMAND_MODE
  • SSH_AUTH_SOCK
  • PGUSER
  • __CF_USER_TEXT_ENCODING
  • LSCOLORS
  • _
  • LaunchInstanceID
  • PWD
  • LANG
  • ITERM_PROFILE
  • XPC_FLAGS
  • HISTIGNORE
  • XPC_SERVICE_NAME
  • COLORFGBG
  • HOME
  • SHLVL
  • PYENV_SHELL
  • LC_TERMINAL_VERSION
  • GREP_OPTIONS
  • ITERM_SESSION_ID
  • LOGNAME
  • NVM_BIN
  • PIPENV_INSTALL_TIMEOUT
  • DISPLAY
  • LC_TERMINAL
  • SECURITYSESSIONID
  • COLORTERM
  • PIP_DISABLE_PIP_VERSION_CHECK
  • PYTHONDONTWRITEBYTECODE
  • PIP_SHIMS_BASE_MODULE
  • PIP_PYTHON_PATH
  • PYTHONFINDER_IGNORE_UNSUPPORTED

Pipenv–specific environment variables:

  • PIPENV_IGNORE_VIRTUALENVS: 1
  • PIPENV_INSTALL_TIMEOUT: 1

Debug–specific environment variables:

  • PATH: /usr/local/Cellar/pipenv/2020.8.13/libexec/tools:/Users/vitya/.nvm/versions/node/v11.7.0/bin:/Users/vitya/.pyenv/shims:/usr/local/bin:/usr/bin:/bin:/usr/sbin:/sbin:/opt/X11/bin:/Users/vitya/Library/Python/3.6/bin
  • SHELL: /bin/bash
  • LANG: en_US.UTF-8
  • PWD: /Users/vitya/temp/proj1

Contents of Pipfile ('/Users/vitya/temp/proj1/Pipfile'):

[[source]]
url = "https://pypi.python.org/simple"
verify_ssl = true
name = "pypi"

[packages] 
urllib3 = "==1.25.10"

Contents of Pipfile.lock ('/Users/vitya/temp/proj1/Pipfile.lock'):

{
    "_meta": {
        "hash": {
            "sha256": "14b462030f651ac7b330ae833537157fba96aeb48561598d3cdc6851a5adb73b"
        },
        "pipfile-spec": 6,
        "requires": {},
        "sources": [
            {
                "name": "pypi",
                "url": "https://pypi.org/simple",
                "verify_ssl": true
            }
        ]
    },
    "default": {
        "urllib3": {
            "hashes": [
                "sha256:91056c15fa70756691db97756772bb1eb9678fa585d9184f24534b100dc60f4a",
                "sha256:e7983572181f5e1522d9c98453462384ee92a0be7fac5f1413a1e35c56cc0461"
            ],
            "index": "pypi",
            "version": "==1.25.10"
        }
    },
    "develop": {}
}
@frostming
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Contributor

The issue is identified and addressed in #4425

As a workaround, you can raise the timeout value to make installation pass by overriding the env var PIPENV_INSTALL_TIMEOUT=1800

wip-sync pushed a commit to NetBSD/pkgsrc-wip that referenced this issue Jan 21, 2022
2022.1.8 (2022-01-08)
=====================

Bug Fixes
---------

- Remove the extra parentheses around the venv prompt.  `#4877 <https://github.com/pypa/pipenv/issues/4877>`_
- Fix a bug of installation fails when extra index url is given.  `#4881 <https://github.com/pypa/pipenv/issues/4881>`_
- Fix regression where lockfiles would only include the hashes for releases for the platform generating the lockfile  `#4885 <https://github.com/pypa/pipenv/issues/4885>`_
- Fix the index parsing to reject illegal requirements.txt.  `#4899 <https://github.com/pypa/pipenv/issues/4899>`_

2021.11.23 (2021-11-23)
=======================

Bug Fixes
---------

- Update ``charset-normalizer`` from ``2.0.3`` to ``2.0.7``, this fixes an import error on Python 3.6.  `#4865 <https://github.com/pypa/pipenv/issues/4865>`_
- Fix a bug of deleting a virtualenv that is not managed by Pipenv.  `#4867 <https://github.com/pypa/pipenv/issues/4867>`_
- Fix a bug that source is not added to ``Pipfile`` when index url is given with ``pipenv install``.  `#4873 <https://github.com/pypa/pipenv/issues/4873>`_

2021.11.15 (2021-11-15)
=======================

Bug Fixes
---------

- Return an empty dict when ``PIPENV_DONT_LOAD_ENV`` is set.  `#4851 <https://github.com/pypa/pipenv/issues/4851>`_
- Don't use ``sys.executable`` when inside an activated venv.  `#4852 <https://github.com/pypa/pipenv/issues/4852>`_

Vendored Libraries
------------------

- Drop the vendored ``jinja2`` dependency as it is not needed any more.  `#4858 <https://github.com/pypa/pipenv/issues/4858>`_
- Update ``click`` from ``8.0.1`` to ``8.0.3``, to fix a problem with bash completion.  `#4860 <https://github.com/pypa/pipenv/issues/4860>`_
- Drop unused vendor ``chardet``.  `#4862 <https://github.com/pypa/pipenv/issues/4862>`_

Improved Documentation
----------------------

- Fix the documentation to reflect the fact that special characters must be percent-encoded in the URL.  `#4856 <https://github.com/pypa/pipenv/issues/4856>`_

2021.11.9 (2021-11-09)
======================

Features & Improvements
-----------------------

- Replace ``click-completion`` with ``click``'s own completion implementation.  `#4786 <https://github.com/pypa/pipenv/issues/4786>`_

Bug Fixes
---------

- Fix a bug that ``pipenv run`` doesn't set environment variables correctly.  `#4831 <https://github.com/pypa/pipenv/issues/4831>`_
- Fix a bug that certifi can't be loaded within ``notpip``'s vendor library. This makes several objects of ``pip`` fail to be imported.  `#4833 <https://github.com/pypa/pipenv/issues/4833>`_
- Fix a bug that ``3.10.0`` can be found be python finder.  `#4837 <https://github.com/pypa/pipenv/issues/4837>`_

Vendored Libraries
------------------

- Update ``pythonfinder`` from ``1.2.8`` to ``1.2.9``.  `#4837 <https://github.com/pypa/pipenv/issues/4837>`_

2021.11.5.post0 (2021-11-05)
============================

Bug Fixes
---------

- Fix a regression that ``pipenv shell`` fails to start a subshell.  `#4828 <https://github.com/pypa/pipenv/issues/4828>`_
- Fix a regression that ``pip_shims`` object isn't imported correctly.  `#4829 <https://github.com/pypa/pipenv/issues/4829>`_

2021.11.5 (2021-11-05)
======================

Features & Improvements
-----------------------

- Avoid sharing states but create project objects on demand. So that most integration test cases are able to switch to a in-process execution method.  `#4757 <https://github.com/pypa/pipenv/issues/4757>`_
- Shell-quote ``pip`` commands when logging.  `#4760 <https://github.com/pypa/pipenv/issues/4760>`_

Bug Fixes
---------

- Ignore empty .venv in rood dir and create project name base virtual environment  `#4790 <https://github.com/pypa/pipenv/issues/4790>`_

Vendored Libraries
------------------

- Update vendored dependencies
  - ``attrs`` from ``20.3.0`` to ``21.2.0``
  - ``cerberus`` from ``1.3.2`` to ``1.3.4``
  - ``certifi`` from ``2020.11.8`` to ``2021.5.30``
  - ``chardet`` from ``3.0.4`` to ``4.0.0``
  - ``click`` from ``7.1.2`` to ``8.0.1``
  - ``distlib`` from ``0.3.1`` to ``0.3.2``
  - ``idna`` from ``2.10`` to ``3.2``
  - ``importlib-metadata`` from ``2.0.0`` to ``4.6.1``
  - ``importlib-resources`` from ``3.3.0`` to ``5.2.0``
  - ``jinja2`` from ``2.11.2`` to ``3.0.1``
  - ``markupsafe`` from ``1.1.1`` to ``2.0.1``
  - ``more-itertools`` from ``5.0.0`` to ``8.8.0``
  - ``packaging`` from ``20.8`` to ``21.0``
  - ``pep517`` from ``0.9.1`` to ``0.11.0``
  - ``pipdeptree`` from ``1.0.0`` to ``2.0.0``
  - ``ptyprocess`` from ``0.6.0`` to ``0.7.0``
  - ``python-dateutil`` from ``2.8.1`` to ``2.8.2``
  - ``python-dotenv`` from ``0.15.0`` to ``0.19.0``
  - ``pythonfinder`` from ``1.2.5`` to ``1.2.8``
  - ``requests`` from ``2.25.0`` to ``2.26.0``
  - ``shellingham`` from ``1.3.2`` to ``1.4.0``
  - ``six`` from ``1.15.0`` to ``1.16.0``
  - ``tomlkit`` from ``0.7.0`` to ``0.7.2``
  - ``urllib3`` from ``1.26.1`` to ``1.26.6``
  - ``zipp`` from ``1.2.0`` to ``3.5.0``

  Add new vendored dependencies
  - ``charset-normalizer 2.0.3``
  - ``termcolor 1.1.0``
  - ``tomli 1.1.0``
  - ``wheel 0.36.2``  `#4747 <https://github.com/pypa/pipenv/issues/4747>`_
- Drop the dependencies for Python 2.7 compatibility purpose.  `#4751 <https://github.com/pypa/pipenv/issues/4751>`_
- Switch the dependency resolver from ``pip-tools`` to `pip`.

  Update vendor libraries:
  - Update ``requirementslib`` from ``1.5.16`` to ``1.6.1``
  - Update ``pip-shims`` from ``0.5.6`` to ``0.6.0``
  - New vendor ``platformdirs 2.4.0``  `#4759 <https://github.com/pypa/pipenv/issues/4759>`_

Improved Documentation
----------------------

- remove prefixes on install commands for easy copy/pasting  `#4792 <https://github.com/pypa/pipenv/issues/4792>`_
- Officially drop support for Python 2.7 and Python 3.5.  `#4261 <https://github.com/pypa/pipenv/issues/4261>`_

2021.5.29 (2021-05-29)
======================

Bug Fixes
---------

- Fix a bug where passing --skip-lock when PIPFILE has no [SOURCE] section throws the error: "tomlkit.exceptions.NonExistentKey: 'Key "source" does not exist.'"  `#4141 <https://github.com/pypa/pipenv/issues/4141>`_
- Fix bug where environment wouldn't activate in paths containing & and $ symbols  `#4538 <https://github.com/pypa/pipenv/issues/4538>`_
- Fix a bug that ``importlib-metadata`` from the project's dependencies conflicts with that from ``pipenv``'s.  `#4549 <https://github.com/pypa/pipenv/issues/4549>`_
- Fix a bug where ``pep508checker.py`` did not expect double-digit Python minor versions (e.g. "3.10").  `#4602 <https://github.com/pypa/pipenv/issues/4602>`_
- Fix bug where environment wouldn't activate in paths containing () and [] symbols  `#4615 <https://github.com/pypa/pipenv/issues/4615>`_
- Fix bug preventing use of pipenv lock --pre  `#4642 <https://github.com/pypa/pipenv/issues/4642>`_

Vendored Libraries
------------------

- Update ``packaging`` from ``20.4`` to ``20.8``.  `#4591 <https://github.com/pypa/pipenv/issues/4591>`_

2020.11.15 (2020-11-15)
=======================

Features & Improvements
-----------------------

- Support expanding environment variables in requirement URLs.  `#3516 <https://github.com/pypa/pipenv/issues/3516>`_
- Show warning message when a dependency is skipped in locking due to the mismatch of its markers.  `#4346 <https://github.com/pypa/pipenv/issues/4346>`_

Bug Fixes
---------

- Fix a bug that executable scripts with leading backslash can't be executed via ``pipenv run``.  `#4368 <https://github.com/pypa/pipenv/issues/4368>`_
- Fix a bug that VCS dependencies always satisfy even if the ref has changed.  `#4387 <https://github.com/pypa/pipenv/issues/4387>`_
- Restrict the acceptable hash type to SHA256 only.  `#4517 <https://github.com/pypa/pipenv/issues/4517>`_
- Fix the output of ``pipenv scripts`` under Windows platform.  `#4523 <https://github.com/pypa/pipenv/issues/4523>`_
- Fix a bug that the resolver takes wrong section to validate constraints.  `#4527 <https://github.com/pypa/pipenv/issues/4527>`_

Vendored Libraries
------------------

- Update vendored dependencies:
    - ``colorama`` from ``0.4.3`` to ``0.4.4``
    - ``python-dotenv`` from ``0.10.3`` to ``0.15.0``
    - ``first`` from ``2.0.1`` to ``2.0.2``
    - ``iso8601`` from ``0.1.12`` to ``0.1.13``
    - ``parse`` from ``1.15.0`` to ``1.18.0``
    - ``pipdeptree`` from ``0.13.2`` to ``1.0.0``
    - ``requests`` from ``2.23.0`` to ``2.25.0``
    - ``idna`` from ``2.9`` to ``2.10``
    - ``urllib3`` from ``1.25.9`` to ``1.26.1``
    - ``certifi`` from ``2020.4.5.1`` to ``2020.11.8``
    - ``requirementslib`` from ``1.5.15`` to ``1.5.16``
    - ``attrs`` from ``19.3.0`` to ``20.3.0``
    - ``distlib`` from ``0.3.0`` to ``0.3.1``
    - ``packaging`` from ``20.3`` to ``20.4``
    - ``six`` from ``1.14.0`` to ``1.15.0``
    - ``semver`` from ``2.9.0`` to ``2.13.0``
    - ``toml`` from ``0.10.1`` to ``0.10.2``
    - ``cached-property`` from ``1.5.1`` to ``1.5.2``
    - ``yaspin`` from ``0.14.3`` to ``1.2.0``
    - ``resolvelib`` from ``0.3.0`` to ``0.5.2``
    - ``pep517`` from ``0.8.2`` to ``0.9.1``
    - ``zipp`` from ``0.6.0`` to ``1.2.0``
    - ``importlib-metadata`` from ``1.6.0`` to ``2.0.0``
    - ``importlib-resources`` from ``1.5.0`` to ``3.3.0``  `#4533 <https://github.com/pypa/pipenv/issues/4533>`_

Improved Documentation
----------------------

- Fix suggested pyenv setup to avoid using shimmed interpreter  `#4534 <https://github.com/pypa/pipenv/issues/4534>`_

2020.11.4 (2020-11-04)
======================

Features & Improvements
-----------------------

- Add a new command ``pipenv scripts`` to display shortcuts from Pipfile.  `#3686 <https://github.com/pypa/pipenv/issues/3686>`_
- Retrieve package file hash from URL to accelerate the locking process.  `#3827 <https://github.com/pypa/pipenv/issues/3827>`_
- Add the missing ``--system`` option to ``pipenv sync``.  `#4441 <https://github.com/pypa/pipenv/issues/4441>`_
- Add a new option pair ``--header/--no-header`` to ``pipenv lock`` command,
  which adds a header to the generated requirements.txt  `#4443 <https://github.com/pypa/pipenv/issues/4443>`_

Bug Fixes
---------

- Fix a bug that percent encoded characters will be unquoted incorrectly in the file URL.  `#4089 <https://github.com/pypa/pipenv/issues/4089>`_
- Fix a bug where setting PIPENV_PYTHON to file path breaks environment name  `#4225 <https://github.com/pypa/pipenv/issues/4225>`_
- Fix a bug that paths are not normalized before comparison.  `#4330 <https://github.com/pypa/pipenv/issues/4330>`_
- Handle Python major and minor versions correctly in Pipfile creation.  `#4379 <https://github.com/pypa/pipenv/issues/4379>`_
- Fix a bug that non-wheel file requirements can be resolved successfully.  `#4386 <https://github.com/pypa/pipenv/issues/4386>`_
- Fix a bug that ``pexept.exceptions.TIMEOUT`` is not caught correctly because of the wrong import path.  `#4424 <https://github.com/pypa/pipenv/issues/4424>`_
- Fix a bug that compound TOML table is not parsed correctly.  `#4433 <https://github.com/pypa/pipenv/issues/4433>`_
- Fix a bug that invalid Python paths from Windows registry break ``pipenv install``.  `#4436 <https://github.com/pypa/pipenv/issues/4436>`_
- Fix a bug that function calls in ``setup.py`` can't be parsed rightly.  `#4446 <https://github.com/pypa/pipenv/issues/4446>`_
- Fix a bug that dist-info inside ``venv`` directory will be mistaken as the editable package's metadata.  `#4480 <https://github.com/pypa/pipenv/issues/4480>`_
- Make the order of hashes in resolution result stable.  `#4513 <https://github.com/pypa/pipenv/issues/4513>`_

Vendored Libraries
------------------

- Update ``tomlkit`` from ``0.5.11`` to ``0.7.0``.  `#4433 <https://github.com/pypa/pipenv/issues/4433>`_
- Update ``requirementslib`` from ``1.5.13`` to ``1.5.14``.  `#4480 <https://github.com/pypa/pipenv/issues/4480>`_

Improved Documentation
----------------------

- Discourage homebrew installation in installation guides.  `#4013 <https://github.com/pypa/pipenv/issues/4013>`_
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