From 7af4927de500bda2c8d7abe45fa9a58805cc9928 Mon Sep 17 00:00:00 2001 From: Du Phan Date: Thu, 1 Jun 2023 08:34:22 -0400 Subject: [PATCH] Bump to version 0.12.1 --- examples/annotation.py | 2 +- examples/ar2.py | 2 +- examples/baseball.py | 2 +- examples/bnn.py | 2 +- examples/covtype.py | 2 +- examples/funnel.py | 2 +- examples/gaussian_shells.py | 2 +- examples/gp.py | 2 +- examples/hmm.py | 2 +- examples/holt_winters.py | 2 +- examples/horseshoe_regression.py | 2 +- examples/minipyro.py | 2 +- examples/mortality.py | 2 +- examples/neutra.py | 2 +- examples/ode.py | 2 +- examples/prodlda.py | 2 +- examples/proportion_test.py | 2 +- examples/sparse_regression.py | 2 +- examples/stochastic_volatility.py | 2 +- examples/thompson_sampling.py | 2 +- examples/toy_mixture_model_discrete_enumeration.py | 2 +- examples/ucbadmit.py | 2 +- examples/vae.py | 2 +- notebooks/source/bad_posterior_geometry.ipynb | 2 +- notebooks/source/bayesian_hierarchical_linear_regression.ipynb | 2 +- notebooks/source/bayesian_hierarchical_stacking.ipynb | 2 +- notebooks/source/bayesian_imputation.ipynb | 2 +- notebooks/source/bayesian_regression.ipynb | 2 +- notebooks/source/gmm.ipynb | 2 +- notebooks/source/logistic_regression.ipynb | 2 +- notebooks/source/model_rendering.ipynb | 2 +- notebooks/source/ordinal_regression.ipynb | 2 +- notebooks/source/time_series_forecasting.ipynb | 2 +- numpyro/version.py | 2 +- 34 files changed, 34 insertions(+), 34 deletions(-) diff --git a/examples/annotation.py b/examples/annotation.py index bfb9b925b..a4f064ec2 100644 --- a/examples/annotation.py +++ b/examples/annotation.py @@ -320,7 +320,7 @@ def main(args): if __name__ == "__main__": - assert numpyro.__version__.startswith("0.12.0") + assert numpyro.__version__.startswith("0.12.1") parser = argparse.ArgumentParser(description="Bayesian Models of Annotation") parser.add_argument("-n", "--num-samples", nargs="?", default=1000, type=int) parser.add_argument("--num-warmup", nargs="?", default=1000, type=int) diff --git a/examples/ar2.py b/examples/ar2.py index b9d24db2f..38787ea67 100644 --- a/examples/ar2.py +++ b/examples/ar2.py @@ -114,7 +114,7 @@ def main(args): if __name__ == "__main__": - assert numpyro.__version__.startswith("0.12.0") + assert numpyro.__version__.startswith("0.12.1") parser = argparse.ArgumentParser(description="AR2 example") parser.add_argument("--num-data", nargs="?", default=142, type=int) parser.add_argument("-n", "--num-samples", nargs="?", default=1000, type=int) diff --git a/examples/baseball.py b/examples/baseball.py index a606fbc7f..958665acd 100644 --- a/examples/baseball.py +++ b/examples/baseball.py @@ -210,7 +210,7 @@ def main(args): if __name__ == "__main__": - assert numpyro.__version__.startswith("0.12.0") + assert numpyro.__version__.startswith("0.12.1") parser = argparse.ArgumentParser(description="Baseball batting average using MCMC") parser.add_argument("-n", "--num-samples", nargs="?", default=3000, type=int) parser.add_argument("--num-warmup", nargs="?", default=1500, type=int) diff --git a/examples/bnn.py b/examples/bnn.py index 9029f01e0..5330ce315 100644 --- a/examples/bnn.py +++ b/examples/bnn.py @@ -160,7 +160,7 @@ def main(args): if __name__ == "__main__": - assert numpyro.__version__.startswith("0.12.0") + assert numpyro.__version__.startswith("0.12.1") parser = argparse.ArgumentParser(description="Bayesian neural network example") parser.add_argument("-n", "--num-samples", nargs="?", default=2000, type=int) parser.add_argument("--num-warmup", nargs="?", default=1000, type=int) diff --git a/examples/covtype.py b/examples/covtype.py index cc503fb5e..9ab6a9725 100644 --- a/examples/covtype.py +++ b/examples/covtype.py @@ -206,7 +206,7 @@ def main(args): if __name__ == "__main__": - assert numpyro.__version__.startswith("0.12.0") + assert numpyro.__version__.startswith("0.12.1") parser = argparse.ArgumentParser(description="parse args") parser.add_argument( "-n", "--num-samples", default=1000, type=int, help="number of samples" diff --git a/examples/funnel.py b/examples/funnel.py index d63821fbb..d66298111 100644 --- a/examples/funnel.py +++ b/examples/funnel.py @@ -139,7 +139,7 @@ def main(args): if __name__ == "__main__": - assert numpyro.__version__.startswith("0.12.0") + assert numpyro.__version__.startswith("0.12.1") parser = argparse.ArgumentParser( description="Non-centered reparameterization example" ) diff --git a/examples/gaussian_shells.py b/examples/gaussian_shells.py index 6422f929b..37bd3fdfc 100644 --- a/examples/gaussian_shells.py +++ b/examples/gaussian_shells.py @@ -120,7 +120,7 @@ def main(args): if __name__ == "__main__": - assert numpyro.__version__.startswith("0.12.0") + assert numpyro.__version__.startswith("0.12.1") parser = argparse.ArgumentParser(description="Nested sampler for Gaussian shells") parser.add_argument("-n", "--num-samples", nargs="?", default=10000, type=int) parser.add_argument("--num-warmup", nargs="?", default=1000, type=int) diff --git a/examples/gp.py b/examples/gp.py index 6a32d660f..d070d92ff 100644 --- a/examples/gp.py +++ b/examples/gp.py @@ -170,7 +170,7 @@ def main(args): if __name__ == "__main__": - assert numpyro.__version__.startswith("0.12.0") + assert numpyro.__version__.startswith("0.12.1") parser = argparse.ArgumentParser(description="Gaussian Process example") parser.add_argument("-n", "--num-samples", nargs="?", default=1000, type=int) parser.add_argument("--num-warmup", nargs="?", default=1000, type=int) diff --git a/examples/hmm.py b/examples/hmm.py index bbe05f100..f068084e5 100644 --- a/examples/hmm.py +++ b/examples/hmm.py @@ -263,7 +263,7 @@ def main(args): if __name__ == "__main__": - assert numpyro.__version__.startswith("0.12.0") + assert numpyro.__version__.startswith("0.12.1") parser = argparse.ArgumentParser(description="Semi-supervised Hidden Markov Model") parser.add_argument("--num-categories", default=3, type=int) parser.add_argument("--num-words", default=10, type=int) diff --git a/examples/holt_winters.py b/examples/holt_winters.py index 934b3ab55..a5eff8dfa 100644 --- a/examples/holt_winters.py +++ b/examples/holt_winters.py @@ -180,7 +180,7 @@ def main(args): if __name__ == "__main__": - assert numpyro.__version__.startswith("0.12.0") + assert numpyro.__version__.startswith("0.12.1") parser = argparse.ArgumentParser(description="Holt-Winters") parser.add_argument("--T", nargs="?", default=6, type=int) parser.add_argument("--future", nargs="?", default=1, type=int) diff --git a/examples/horseshoe_regression.py b/examples/horseshoe_regression.py index ea0695277..60ce31954 100644 --- a/examples/horseshoe_regression.py +++ b/examples/horseshoe_regression.py @@ -162,7 +162,7 @@ def main(args): if __name__ == "__main__": - assert numpyro.__version__.startswith("0.12.0") + assert numpyro.__version__.startswith("0.12.1") parser = argparse.ArgumentParser(description="Horseshoe regression example") parser.add_argument("-n", "--num-samples", nargs="?", default=2000, type=int) parser.add_argument("--num-warmup", nargs="?", default=1000, type=int) diff --git a/examples/minipyro.py b/examples/minipyro.py index b0d792082..73d58b2f8 100644 --- a/examples/minipyro.py +++ b/examples/minipyro.py @@ -58,7 +58,7 @@ def body_fn(i, val): if __name__ == "__main__": - assert numpyro.__version__.startswith("0.12.0") + assert numpyro.__version__.startswith("0.12.1") parser = argparse.ArgumentParser(description="Mini Pyro demo") parser.add_argument("-f", "--full-pyro", action="store_true", default=False) parser.add_argument("-n", "--num-steps", default=1001, type=int) diff --git a/examples/mortality.py b/examples/mortality.py index c357aa0fd..4c41961f1 100644 --- a/examples/mortality.py +++ b/examples/mortality.py @@ -220,7 +220,7 @@ def main(args): if __name__ == "__main__": - assert numpyro.__version__.startswith("0.12.0") + assert numpyro.__version__.startswith("0.12.1") parser = argparse.ArgumentParser(description="Mortality regression model") parser.add_argument("-n", "--num-samples", nargs="?", default=500, type=int) diff --git a/examples/neutra.py b/examples/neutra.py index 5e14446e4..f9a65ed32 100644 --- a/examples/neutra.py +++ b/examples/neutra.py @@ -197,7 +197,7 @@ def main(args): if __name__ == "__main__": - assert numpyro.__version__.startswith("0.12.0") + assert numpyro.__version__.startswith("0.12.1") parser = argparse.ArgumentParser(description="NeuTra HMC") parser.add_argument("-n", "--num-samples", nargs="?", default=4000, type=int) parser.add_argument("--num-warmup", nargs="?", default=1000, type=int) diff --git a/examples/ode.py b/examples/ode.py index 54558143d..4f79a7afe 100644 --- a/examples/ode.py +++ b/examples/ode.py @@ -117,7 +117,7 @@ def main(args): if __name__ == "__main__": - assert numpyro.__version__.startswith("0.12.0") + assert numpyro.__version__.startswith("0.12.1") parser = argparse.ArgumentParser(description="Predator-Prey Model") parser.add_argument("-n", "--num-samples", nargs="?", default=1000, type=int) parser.add_argument("--num-warmup", nargs="?", default=1000, type=int) diff --git a/examples/prodlda.py b/examples/prodlda.py index 6e51a61c1..6f62d4af1 100644 --- a/examples/prodlda.py +++ b/examples/prodlda.py @@ -314,7 +314,7 @@ def main(args): if __name__ == "__main__": - assert numpyro.__version__.startswith("0.12.0") + assert numpyro.__version__.startswith("0.12.1") parser = argparse.ArgumentParser( description="Probabilistic topic modelling with Flax and Haiku" ) diff --git a/examples/proportion_test.py b/examples/proportion_test.py index bd429c455..e93a157ee 100644 --- a/examples/proportion_test.py +++ b/examples/proportion_test.py @@ -160,7 +160,7 @@ def main(args): if __name__ == "__main__": - assert numpyro.__version__.startswith("0.12.0") + assert numpyro.__version__.startswith("0.12.1") parser = argparse.ArgumentParser(description="Testing whether ") parser.add_argument("-n", "--num-samples", nargs="?", default=500, type=int) parser.add_argument("--num-warmup", nargs="?", default=1500, type=int) diff --git a/examples/sparse_regression.py b/examples/sparse_regression.py index 00840336b..9616a1f41 100644 --- a/examples/sparse_regression.py +++ b/examples/sparse_regression.py @@ -384,7 +384,7 @@ def main(args): if __name__ == "__main__": - assert numpyro.__version__.startswith("0.12.0") + assert numpyro.__version__.startswith("0.12.1") parser = argparse.ArgumentParser(description="Gaussian Process example") parser.add_argument("-n", "--num-samples", nargs="?", default=1000, type=int) parser.add_argument("--num-warmup", nargs="?", default=500, type=int) diff --git a/examples/stochastic_volatility.py b/examples/stochastic_volatility.py index eeb824df4..6d3ea405b 100644 --- a/examples/stochastic_volatility.py +++ b/examples/stochastic_volatility.py @@ -122,7 +122,7 @@ def main(args): if __name__ == "__main__": - assert numpyro.__version__.startswith("0.12.0") + assert numpyro.__version__.startswith("0.12.1") parser = argparse.ArgumentParser(description="Stochastic Volatility Model") parser.add_argument("-n", "--num-samples", nargs="?", default=600, type=int) parser.add_argument("--num-warmup", nargs="?", default=600, type=int) diff --git a/examples/thompson_sampling.py b/examples/thompson_sampling.py index 42691593e..8b50e5ac6 100644 --- a/examples/thompson_sampling.py +++ b/examples/thompson_sampling.py @@ -292,7 +292,7 @@ def main(args): if __name__ == "__main__": - assert numpyro.__version__.startswith("0.12.0") + assert numpyro.__version__.startswith("0.12.1") parser = argparse.ArgumentParser(description="Thompson sampling example") parser.add_argument( "--num-random", nargs="?", default=2, type=int, help="number of random draws" diff --git a/examples/toy_mixture_model_discrete_enumeration.py b/examples/toy_mixture_model_discrete_enumeration.py index 7d3b0e76c..feffa4f3c 100644 --- a/examples/toy_mixture_model_discrete_enumeration.py +++ b/examples/toy_mixture_model_discrete_enumeration.py @@ -126,7 +126,7 @@ def get_true_pred_CPDs(CPD, posterior_param): if __name__ == "__main__": - assert numpyro.__version__.startswith("0.12.0") + assert numpyro.__version__.startswith("0.12.1") parser = argparse.ArgumentParser(description="Toy mixture model") parser.add_argument("-n", "--num-steps", default=4000, type=int) parser.add_argument("-o", "--num-obs", default=10000, type=int) diff --git a/examples/ucbadmit.py b/examples/ucbadmit.py index ec6ac0fda..13d47956a 100644 --- a/examples/ucbadmit.py +++ b/examples/ucbadmit.py @@ -151,7 +151,7 @@ def main(args): if __name__ == "__main__": - assert numpyro.__version__.startswith("0.12.0") + assert numpyro.__version__.startswith("0.12.1") parser = argparse.ArgumentParser( description="UCBadmit gender discrimination using HMC" ) diff --git a/examples/vae.py b/examples/vae.py index 3e52a295b..ddf27c764 100644 --- a/examples/vae.py +++ b/examples/vae.py @@ -160,7 +160,7 @@ def reconstruct_img(epoch, rng_key): if __name__ == "__main__": - assert numpyro.__version__.startswith("0.12.0") + assert numpyro.__version__.startswith("0.12.1") parser = argparse.ArgumentParser(description="parse args") parser.add_argument( "-n", "--num-epochs", default=15, type=int, help="number of training epochs" diff --git a/notebooks/source/bad_posterior_geometry.ipynb b/notebooks/source/bad_posterior_geometry.ipynb index acefa0e2f..a9ddc2201 100644 --- a/notebooks/source/bad_posterior_geometry.ipynb +++ b/notebooks/source/bad_posterior_geometry.ipynb @@ -50,7 +50,7 @@ "\n", "from numpyro.infer import MCMC, NUTS\n", "\n", - "assert numpyro.__version__.startswith(\"0.12.0\")\n", + "assert numpyro.__version__.startswith(\"0.12.1\")\n", "\n", "# NB: replace cpu by gpu to run this notebook on gpu\n", "numpyro.set_platform(\"cpu\")" diff --git a/notebooks/source/bayesian_hierarchical_linear_regression.ipynb b/notebooks/source/bayesian_hierarchical_linear_regression.ipynb index 4567f000c..11e2241ff 100644 --- a/notebooks/source/bayesian_hierarchical_linear_regression.ipynb +++ b/notebooks/source/bayesian_hierarchical_linear_regression.ipynb @@ -245,7 +245,7 @@ "import numpyro.distributions as dist\n", "from jax import random\n", "\n", - "assert numpyro.__version__.startswith(\"0.12.0\")" + "assert numpyro.__version__.startswith(\"0.12.1\")" ] }, { diff --git a/notebooks/source/bayesian_hierarchical_stacking.ipynb b/notebooks/source/bayesian_hierarchical_stacking.ipynb index 53753d33b..c38fea40e 100644 --- a/notebooks/source/bayesian_hierarchical_stacking.ipynb +++ b/notebooks/source/bayesian_hierarchical_stacking.ipynb @@ -96,7 +96,7 @@ " set_matplotlib_formats(\"svg\")\n", "\n", "numpyro.set_host_device_count(4)\n", - "assert numpyro.__version__.startswith(\"0.12.0\")" + "assert numpyro.__version__.startswith(\"0.12.1\")" ] }, { diff --git a/notebooks/source/bayesian_imputation.ipynb b/notebooks/source/bayesian_imputation.ipynb index c6801cbcb..c2740754c 100644 --- a/notebooks/source/bayesian_imputation.ipynb +++ b/notebooks/source/bayesian_imputation.ipynb @@ -55,7 +55,7 @@ "if \"NUMPYRO_SPHINXBUILD\" in os.environ:\n", " set_matplotlib_formats(\"svg\")\n", "\n", - "assert numpyro.__version__.startswith(\"0.12.0\")" + "assert numpyro.__version__.startswith(\"0.12.1\")" ] }, { diff --git a/notebooks/source/bayesian_regression.ipynb b/notebooks/source/bayesian_regression.ipynb index 4e8f5e961..2f0085cc7 100644 --- a/notebooks/source/bayesian_regression.ipynb +++ b/notebooks/source/bayesian_regression.ipynb @@ -95,7 +95,7 @@ "if \"NUMPYRO_SPHINXBUILD\" in os.environ:\n", " set_matplotlib_formats(\"svg\")\n", "\n", - "assert numpyro.__version__.startswith(\"0.12.0\")" + "assert numpyro.__version__.startswith(\"0.12.1\")" ], "execution_count": 2, "outputs": [] diff --git a/notebooks/source/gmm.ipynb b/notebooks/source/gmm.ipynb index 11c733634..db1fae94c 100644 --- a/notebooks/source/gmm.ipynb +++ b/notebooks/source/gmm.ipynb @@ -54,7 +54,7 @@ "%matplotlib inline\n", "\n", "smoke_test = \"CI\" in os.environ\n", - "assert numpyro.__version__.startswith(\"0.12.0\")" + "assert numpyro.__version__.startswith(\"0.12.1\")" ] }, { diff --git a/notebooks/source/logistic_regression.ipynb b/notebooks/source/logistic_regression.ipynb index d19fbf889..eefbab6f1 100644 --- a/notebooks/source/logistic_regression.ipynb +++ b/notebooks/source/logistic_regression.ipynb @@ -41,7 +41,7 @@ "from numpyro.examples.datasets import COVTYPE, load_dataset\n", "from numpyro.infer import HMC, MCMC, NUTS\n", "\n", - "assert numpyro.__version__.startswith(\"0.12.0\")\n", + "assert numpyro.__version__.startswith(\"0.12.1\")\n", "\n", "# NB: replace gpu by cpu to run this notebook in cpu\n", "numpyro.set_platform(\"gpu\")" diff --git a/notebooks/source/model_rendering.ipynb b/notebooks/source/model_rendering.ipynb index 498ab03fb..e08fee41d 100644 --- a/notebooks/source/model_rendering.ipynb +++ b/notebooks/source/model_rendering.ipynb @@ -37,7 +37,7 @@ "import numpyro.distributions as dist\n", "import numpyro.distributions.constraints as constraints\n", "\n", - "assert numpyro.__version__.startswith(\"0.12.0\")" + "assert numpyro.__version__.startswith(\"0.12.1\")" ] }, { diff --git a/notebooks/source/ordinal_regression.ipynb b/notebooks/source/ordinal_regression.ipynb index e234b0ce1..817f219cd 100644 --- a/notebooks/source/ordinal_regression.ipynb +++ b/notebooks/source/ordinal_regression.ipynb @@ -53,7 +53,7 @@ "import pandas as pd\n", "import seaborn as sns\n", "\n", - "assert numpyro.__version__.startswith(\"0.12.0\")" + "assert numpyro.__version__.startswith(\"0.12.1\")" ] }, { diff --git a/notebooks/source/time_series_forecasting.ipynb b/notebooks/source/time_series_forecasting.ipynb index 4b74a5c87..f876c8b1a 100644 --- a/notebooks/source/time_series_forecasting.ipynb +++ b/notebooks/source/time_series_forecasting.ipynb @@ -48,7 +48,7 @@ " set_matplotlib_formats(\"svg\")\n", "\n", "numpyro.set_host_device_count(4)\n", - "assert numpyro.__version__.startswith(\"0.12.0\")" + "assert numpyro.__version__.startswith(\"0.12.1\")" ] }, { diff --git a/numpyro/version.py b/numpyro/version.py index 7f27ac2ac..b0e0d6069 100644 --- a/numpyro/version.py +++ b/numpyro/version.py @@ -1,4 +1,4 @@ # Copyright Contributors to the Pyro project. # SPDX-License-Identifier: Apache-2.0 -__version__ = "0.12.0" +__version__ = "0.12.1"