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Documentation updates & new installation instructions #232
This PR contains new PySB installation instructions for Anaconda and Docker-based installs, which work on Windows, Mac and Linux. Hopefully the new step-by-step approach is clear, but feedback is welcome. I removed the virtual appliance instructions since it's quite out of date now (based on PySB 0.1.9).
I've improved documentation for the Simulation class and SBML/BNGL importers, which are now included in Sphinx output. I also fixed a couple of Sphinx warnings when parsing the