From 79cdba54c2ffa95c0247e47d2001ffe757b122ff Mon Sep 17 00:00:00 2001 From: Jan Janssen Date: Wed, 22 Oct 2025 18:33:29 +0200 Subject: [PATCH 1/9] Update pyproject.toml --- pyproject.toml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/pyproject.toml b/pyproject.toml index 6506664..7deee7c 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -17,7 +17,7 @@ authors = [ license = { file = "LICENSE" } dependencies = [ "numpy>=1.21,<2", - "pydantic>=2.7.0,<=2.11.4", + "pydantic>=2.7.0,<=2.12.3", ] [project.optional-dependencies] From 574648f66d41624091545ca6085fe6c446409b42 Mon Sep 17 00:00:00 2001 From: Jan Janssen Date: Wed, 22 Oct 2025 18:34:36 +0200 Subject: [PATCH 2/9] Update environment.yml --- binder/environment.yml | 5 ++--- 1 file changed, 2 insertions(+), 3 deletions(-) diff --git a/binder/environment.yml b/binder/environment.yml index 0099d39..44d0e86 100644 --- a/binder/environment.yml +++ b/binder/environment.yml @@ -3,8 +3,7 @@ channels: dependencies: - python =3.12 - click =8.1.8 -- pydantic =2.11.4 -- hatch =1.14.1 +- pydantic =2.12.3 - hatchling =1.27.0 - httpcore =1.0.7 - jobflow =0.2.0 @@ -13,5 +12,5 @@ dependencies: - pygraphviz =1.14 - aiida-workgraph =0.5.2 - conda_subprocess =0.0.7 -- networkx =3.4.2 +- networkx =3.5 - cwltool =3.1.20250110105449 From 61e8a14cc8f9968fae727d4df22f9c0c4f6bdbc0 Mon Sep 17 00:00:00 2001 From: Jan Janssen Date: Wed, 22 Oct 2025 18:34:57 +0200 Subject: [PATCH 3/9] Update pyproject.toml --- pyproject.toml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/pyproject.toml b/pyproject.toml index 7deee7c..753d2e0 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -32,6 +32,6 @@ pyiron = [ ] plot = [ "pygraphviz>=1.10,<=1.14", - "networkx>=2.8.8,<=3.4.2", + "networkx>=2.8.8,<=3.5", "ipython>=7.33.0,<=9.0.2", ] From 087778cb556f0a7de3a7b33f307eb31cb66fc35a Mon Sep 17 00:00:00 2001 From: Jan Janssen Date: Wed, 22 Oct 2025 18:37:27 +0200 Subject: [PATCH 4/9] Update environment.yml --- binder/environment.yml | 1 + 1 file changed, 1 insertion(+) diff --git a/binder/environment.yml b/binder/environment.yml index 44d0e86..8fdc6a0 100644 --- a/binder/environment.yml +++ b/binder/environment.yml @@ -4,6 +4,7 @@ dependencies: - python =3.12 - click =8.1.8 - pydantic =2.12.3 +- hatch =1.14.1 - hatchling =1.27.0 - httpcore =1.0.7 - jobflow =0.2.0 From 666ee96d448b6d03b003717c14c0234422c6a742 Mon Sep 17 00:00:00 2001 From: Jan Janssen Date: Wed, 22 Oct 2025 18:39:30 +0200 Subject: [PATCH 5/9] Update environment.yml --- binder/environment.yml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/binder/environment.yml b/binder/environment.yml index 8fdc6a0..85a0f66 100644 --- a/binder/environment.yml +++ b/binder/environment.yml @@ -4,7 +4,6 @@ dependencies: - python =3.12 - click =8.1.8 - pydantic =2.12.3 -- hatch =1.14.1 - hatchling =1.27.0 - httpcore =1.0.7 - jobflow =0.2.0 @@ -14,4 +13,5 @@ dependencies: - aiida-workgraph =0.5.2 - conda_subprocess =0.0.7 - networkx =3.5 +- kiwipy =0.9.0 - cwltool =3.1.20250110105449 From 719834adb270f0fd9085b64da218e3d3e9fd2ce5 Mon Sep 17 00:00:00 2001 From: Jan Janssen Date: Wed, 22 Oct 2025 18:40:47 +0200 Subject: [PATCH 6/9] Update environment.yml --- binder/environment.yml | 3 +-- 1 file changed, 1 insertion(+), 2 deletions(-) diff --git a/binder/environment.yml b/binder/environment.yml index 85a0f66..14e1395 100644 --- a/binder/environment.yml +++ b/binder/environment.yml @@ -12,6 +12,5 @@ dependencies: - pygraphviz =1.14 - aiida-workgraph =0.5.2 - conda_subprocess =0.0.7 -- networkx =3.5 -- kiwipy =0.9.0 +- networkx =3.4.2 - cwltool =3.1.20250110105449 From 82dff4953cd1031ced38246029af231613df2eb7 Mon Sep 17 00:00:00 2001 From: Jan Janssen Date: Wed, 22 Oct 2025 18:43:05 +0200 Subject: [PATCH 7/9] Update environment.yml --- binder/environment.yml | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/binder/environment.yml b/binder/environment.yml index 14e1395..3f08e04 100644 --- a/binder/environment.yml +++ b/binder/environment.yml @@ -3,7 +3,7 @@ channels: dependencies: - python =3.12 - click =8.1.8 -- pydantic =2.12.3 +- pydantic =2.11.4 - hatchling =1.27.0 - httpcore =1.0.7 - jobflow =0.2.0 @@ -12,5 +12,5 @@ dependencies: - pygraphviz =1.14 - aiida-workgraph =0.5.2 - conda_subprocess =0.0.7 -- networkx =3.4.2 +- networkx =3.5 - cwltool =3.1.20250110105449 From 9b44489e148a41e5543f69e87f9220aa46b1180e Mon Sep 17 00:00:00 2001 From: Jan Janssen Date: Wed, 22 Oct 2025 18:49:40 +0200 Subject: [PATCH 8/9] Update environment.yml --- binder/environment.yml | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/binder/environment.yml b/binder/environment.yml index 3f08e04..c6474ae 100644 --- a/binder/environment.yml +++ b/binder/environment.yml @@ -3,7 +3,7 @@ channels: dependencies: - python =3.12 - click =8.1.8 -- pydantic =2.11.4 +- pydantic =2.12.3 - hatchling =1.27.0 - httpcore =1.0.7 - jobflow =0.2.0 @@ -11,6 +11,7 @@ dependencies: - pyiron_workflow =0.13.0 - pygraphviz =1.14 - aiida-workgraph =0.5.2 +- plumpy =0.23.0 - conda_subprocess =0.0.7 - networkx =3.5 - cwltool =3.1.20250110105449 From cc48d09b007d8e3c58fa6825d0603ff1076600f7 Mon Sep 17 00:00:00 2001 From: Jan Janssen Date: Wed, 22 Oct 2025 18:51:09 +0200 Subject: [PATCH 9/9] Update environment.yml --- binder/environment.yml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/binder/environment.yml b/binder/environment.yml index c6474ae..b3aeb36 100644 --- a/binder/environment.yml +++ b/binder/environment.yml @@ -11,7 +11,7 @@ dependencies: - pyiron_workflow =0.13.0 - pygraphviz =1.14 - aiida-workgraph =0.5.2 -- plumpy =0.23.0 +- plumpy =0.25.0 - conda_subprocess =0.0.7 - networkx =3.5 - cwltool =3.1.20250110105449