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Jan 14, 2021
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fix links #10

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26 changes: 13 additions & 13 deletions docs/markdown/pipeline_releases.md
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Expand Up @@ -8,17 +8,17 @@ These versions will be revised periodically and tested in our infrastructure bef

| Analysis type | Pipeline | Use version |
|-----------------------|-----------------------------------------------------------------------|:-----------:|
| RNAseq | [nf-core/rnaseq](nf-co.re/rnaseq/1.4.2) | 1.4.2 |
| RNAseq | [nf-core/rnaseq](https://nf-co.re/rnaseq/1.4.2) | 1.4.2 |
| RNAseq DE analysis | [qbic-pipelines/rnadeseq](https://github.com/qbic-pipelines/rnadeseq) | 1.3.2 |
| WGS / WES | [nf-core/sarek](nf-co.re/sarek/2.6.1) | 2.6.1 |
| HLAtyping | [nf-core/hlatyping](nf-co.re/hlatyping/1.2.0) | 1.2.0 |
| 16S amplicon | [nf-core/ampliseq](nf-co.re/ampliseq/1.1.3) | 1.1.3 |
| Shotgun metagenomics | [nf-core/mag](nf-co.re/mag/1.1.2) | 1.1.2 |
| BCR / TCR repseq | [nf-core/bcellmagic](nf-co.re/bcellmagic/1.2.0) | 1.2.0 |
| CAGEseq | [nf-core/cageseq](nf-co.re/cageseq/1.0.2) | 1.0.2 |
| MHC immunopeptidomics | [nf-core/mhcquant](nf-co.re/mhcquant/1.6.0) | 1.6.0 |
| ATACseq | [nf-core/atacseq](nf-co.re/atacseq/1.2.1) | 1.2.1 |
| Chipseq | [nf-core/chipseq](nf-co.re/chipseq/1.2.1) | 1.2.1 |
| Epitope prediction | [nf-core/epitopeprediction](nf-co.re/epitopeprediction/1.1.0) | 1.1.0 |
| Bacterial assembly | [nf-core/bacass](nf-co.re/bacass/1.1.1) | 1.1.1 |
| RNA fusion | [nf-core/rnafusion](nf-co.re/rnafusion/1.2.0) | 1.2.0 |
| WGS / WES | [nf-core/sarek](https://nf-co.re/sarek/2.6.1) | 2.6.1 |
| HLAtyping | [nf-core/hlatyping](https://nf-co.re/hlatyping/1.2.0) | 1.2.0 |
| 16S amplicon | [nf-core/ampliseq](https://nf-co.re/ampliseq/1.1.3) | 1.1.3 |
| Shotgun metagenomics | [nf-core/mag](https://nf-co.re/mag/1.1.2) | 1.1.2 |
| BCR / TCR repseq | [nf-core/bcellmagic](https://nf-co.re/bcellmagic/1.2.0) | 1.2.0 |
| CAGEseq | [nf-core/cageseq](https://nf-co.re/cageseq/1.0.2) | 1.0.2 |
| MHC immunopeptidomics | [nf-core/mhcquant](https://nf-co.re/mhcquant/1.6.0) | 1.6.0 |
| ATACseq | [nf-core/atacseq](https://nf-co.re/atacseq/1.2.1) | 1.2.1 |
| Chipseq | [nf-core/chipseq](https://nf-co.re/chipseq/1.2.1) | 1.2.1 |
| Epitope prediction | [nf-core/epitopeprediction](https://nf-co.re/epitopeprediction/1.1.0) | 1.1.0 |
| Bacterial assembly | [nf-core/bacass](https://nf-co.re/bacass/1.1.1) | 1.1.1 |
| RNA fusion | [nf-core/rnafusion](https://nf-co.re/rnafusion/1.2.0) | 1.2.0 |