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@prefix : <http://purl.org/lscr#> .
@prefix dc: <http://purl.org/dc/elements/1.1/> .
@prefix up: <http://purl.uniprot.org/core/> .
@prefix dct: <http://purl.org/dc/terms/> .
@prefix ebi: <http://rdf.ebi.ac.uk/terms/ensembl/> .
@prefix obo: <http://purl.obolibrary.org/obo/> .
@prefix oma: <http://omabrowser.org/ontology/oma#> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix xml: <http://www.w3.org/XML/1998/namespace> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
@prefix lscr: <http://purl.org/lscr#> .
@prefix mbgd: <http://mbgd.genome.ad.jp/owl/mbgd#> .
@prefix orth: <http://purl.org/net/orth#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix ensembl: <http://rdf.ebi.ac.uk/resource/ensembl/> .
@prefix upuniprot: <http://purl.uniprot.org/uniprot/> .
@prefix ensemblprot: <http://rdf.ebi.ac.uk/resource/ensembl.protein/> .
@prefix ensembltrascript: <http://rdf.ebi.ac.uk/resource/ensembl.transcript/> .
@base <http://purl.org/lscr> .
<http://purl.org/lscr> rdf:type owl:Ontology ;
owl:versionIRI <http://purl.org/lscr/0.1> .
#################################################################
# Annotation properties
#################################################################
### http://purl.org/lscr#xrefEMBLSequence
lscr:xrefEMBLSequence rdf:type owl:AnnotationProperty ;
rdfs:comment "This cross-reference relates a given resource to any EMBL sequence database resource."@en ;
rdfs:label "see also EMBL sequence"@en ;
rdfs:subPropertyOf rdfs:seeAlso .
### http://purl.org/lscr#xrefEnsembl
lscr:xrefEnsembl rdf:type owl:AnnotationProperty ;
rdfs:comment "This cross-reference relates a given resource to any Ensembl database resource."@en ;
rdfs:label "see also Ensembl cross-reference"@en ;
rdfs:subPropertyOf rdfs:seeAlso .
### http://purl.org/lscr#xrefEnsemblGene
lscr:xrefEnsemblGene rdf:type owl:AnnotationProperty ;
rdfs:comment """This cross-reference relates a given resource to an Ensembl gene.
URI RDF instance template to assign this property: http://rdf.ebi.ac.uk/resource/ensembl/{ENSEMBL_GENE_ID}. Example: :ANY_URI lscr:xrefEnsemblGene http://rdf.ebi.ac.uk/resource/ensembl/ENSG00000139618"""@en ;
rdfs:label "see also Ensembl gene"@en ;
rdfs:subPropertyOf lscr:xrefEnsembl ;
rdfs:range obo:SO_0000704 .
### http://purl.org/lscr#xrefEnsemblProtein
lscr:xrefEnsemblProtein rdf:type owl:AnnotationProperty ;
rdfs:comment """This cross-reference relates a given resource to an Ensembl protein.
URI RDF instance template to assign this property: http://rdf.ebi.ac.uk/resource/ensembl.protein/{ENSEMBL_PROTEIN_ID}. Example: :ANY_URI lscr:xrefEnsemblProtein http://rdf.ebi.ac.uk/resource/ensembl.protein/ENSP00000296370"""@en ;
rdfs:label "see also Ensembl protein"@en ;
rdfs:subPropertyOf lscr:xrefEnsembl ;
rdfs:range ebi:protein .
### http://purl.org/lscr#xrefEnsemblTranscript
lscr:xrefEnsemblTranscript rdf:type owl:AnnotationProperty ;
rdfs:comment """This cross-reference relates a given resource to an Ensembl transcript.
URI RDF instance template to assign this property: http://rdf.ebi.ac.uk/resource/ensembl.transcript/{ENSEMBL_TRANSCRIPT_ID}. Example: :ANY_URI lscr:xrefEnsemblTranscript http://rdf.ebi.ac.uk/resource/ensembl.transcript/ENST00000380152"""@en ;
rdfs:label "see also Ensembl transcript"@en ;
rdfs:subPropertyOf lscr:xrefEnsembl ;
rdfs:range obo:SO_0000673 .
### http://purl.org/lscr#xrefMBGD
lscr:xrefMBGD rdf:type owl:AnnotationProperty ;
rdfs:comment "This cross-reference relates a given resource to any MBGD database resource. MBGD: Microbial Genome Database for Comparative Analysis - mbgd.genome.ad.jp ."@en ;
rdfs:label "see also MBGD cross-reference"@en ;
rdfs:subPropertyOf rdfs:seeAlso .
### http://purl.org/lscr#xrefMBGDGene
lscr:xrefMBGDGene rdf:type owl:AnnotationProperty ;
rdfs:comment "This cross-reference relates a given resource to an MBGD gene. MBGD: Microbial Genome Database for Comparative Analysis - mbgd.genome.ad.jp ."@en ;
rdfs:label "see also MBGD gene"@en ;
rdfs:subPropertyOf lscr:xrefMBGD .
### http://purl.org/lscr#xrefMBGDGroup
lscr:xrefMBGDGroup rdf:type owl:AnnotationProperty ;
rdfs:comment "This cross-reference relates a given resource to an MBGD group of genes. MBGD: Microbial Genome Database for Comparative Analysis - mbgd.genome.ad.jp ."@en ;
rdfs:label "see also MBGD gene group"@en ;
rdfs:subPropertyOf lscr:xrefMBGD .
### http://purl.org/lscr#xrefNCBI
lscr:xrefNCBI rdf:type owl:AnnotationProperty ;
rdfs:comment """This cross-reference relates a given resource to any NCBI database resource. NCBI: National Center for Biotechnology Information -
https://www.ncbi.nlm.nih.gov/ ."""@en ;
rdfs:label "see also NCBI cross-reference"@en ;
rdfs:subPropertyOf rdfs:seeAlso .
### http://purl.org/lscr#xrefNCBIGene
lscr:xrefNCBIGene rdf:type owl:AnnotationProperty ;
rdfs:comment """This cross-reference relates a given resource to an NCBI gene resource. NCBI: National Center for Biotechnology Information -
https://www.ncbi.nlm.nih.gov/ ."""@en ;
rdfs:label "see also NCBI gene"@en ;
rdfs:subPropertyOf lscr:xrefNCBI .
### http://purl.org/lscr#xrefNCBIProtein
lscr:xrefNCBIProtein rdf:type owl:AnnotationProperty ;
rdfs:comment """This cross-reference relates a given resource to an NCBI protein resource. NCBI: National Center for Biotechnology Information -
https://www.ncbi.nlm.nih.gov/ ."""@en ;
rdfs:label "see also NCBI protein"@en ;
rdfs:subPropertyOf lscr:xrefNCBI .
### http://purl.org/lscr#xrefNCBIRefSeq
lscr:xrefNCBIRefSeq rdf:type owl:AnnotationProperty ;
rdfs:comment """This cross-reference relates a given resource to an NCBI Reference Sequence Database (RefSeq) resource. NCBI: National Center for Biotechnology Information -
https://www.ncbi.nlm.nih.gov/ ."""@en ;
rdfs:label "see also NCBI RefSeq"@en ;
rdfs:subPropertyOf lscr:xrefNCBI .
### http://purl.org/lscr#xrefOMA
lscr:xrefOMA rdf:type owl:AnnotationProperty ;
rdfs:comment "This cross-reference relates a given resource to an OMA database resource."@en ;
rdfs:label "see also OMA cross-reference"@en ;
rdfs:subPropertyOf rdfs:seeAlso .
### http://purl.org/lscr#xrefOMAGroup
lscr:xrefOMAGroup rdf:type owl:AnnotationProperty ;
rdfs:comment "This cross-reference relates a given resource to an OMA group of sequences (e.g.: proteins)."@en ;
rdfs:label "see also OMA group"@en ;
rdfs:subPropertyOf lscr:xrefOMA ;
rdfs:range orth:HomologsCluster .
### http://purl.org/lscr#xrefOMAProtein
lscr:xrefOMAProtein rdf:type owl:AnnotationProperty ;
rdfs:comment """This cross-reference relates a given resource to an OMA proteins.
URI RDF instance template to assign this property: http://omabrowser.org/ontology/oma#PROTEIN_{OMA_ID}. Example: :ANY_URI lscr:xrefOMAProtein http://omabrowser.org/ontology/oma#PROTEIN_HUMAN22168"""@en ;
rdfs:label "see also OMA protein"@en ;
rdfs:subPropertyOf lscr:xrefOMA ;
rdfs:range orth:Protein .
### http://purl.org/lscr#xrefUniprot
lscr:xrefUniprot rdf:type owl:AnnotationProperty ;
rdfs:comment """This cross-reference relates a given resource to a UniProt protein.
URI RDF instance template to assign this property: http://purl.uniprot.org/uniprot/{UNIPROT_ID}. Example: :ANY_URI lscr:xrefUniprot http://purl.uniprot.org/uniprot/P68871"""@en ;
rdfs:label "see also UniProt cross-reference"@en ;
rdfs:subPropertyOf rdfs:seeAlso ;
rdfs:range up:Protein .
#################################################################
# Data properties
#################################################################
### http://purl.org/dc/terms/identifier
dct:identifier rdf:type owl:DatatypeProperty ;
rdfs:range xsd:string ;
rdfs:label "identifier"@en .
#################################################################
# Classes
#################################################################
### http://purl.obolibrary.org/obo/SO_0000673
obo:SO_0000673 rdf:type owl:Class ;
rdfs:isDefinedBy "https://www.ebi.ac.uk/rdf/documentation/ensembl/" ;
rdfs:label "Transcript" .
### http://purl.obolibrary.org/obo/SO_0000704
obo:SO_0000704 rdf:type owl:Class ;
rdfs:isDefinedBy "http://www.ontobee.org/ontology/SO?iri=http://purl.obolibrary.org/obo/SO_0000704" ;
rdfs:label "Gene" .
### http://purl.org/net/orth#Gene
orth:Gene rdf:type owl:Class ;
rdfs:isDefinedBy "https://github.com/qfo/OrthologyOntology" .
### http://purl.org/net/orth#HomologsCluster
orth:HomologsCluster rdf:type owl:Class ;
rdfs:comment "Set of homologous sequences"@en ;
rdfs:label "Cluster of homologous sequences"@en .
### http://purl.org/net/orth#Protein
orth:Protein rdf:type owl:Class ;
rdfs:isDefinedBy "https://github.com/qfo/OrthologyOntology" .
### http://purl.uniprot.org/core/Protein
up:Protein rdf:type owl:Class ;
rdfs:isDefinedBy "http://purl.uniprot.org/core/" .
### http://rdf.ebi.ac.uk/terms/ensembl/protein
ebi:protein rdf:type owl:Class ;
rdfs:isDefinedBy "https://www.ebi.ac.uk/rdf/documentation/ensembl/" .
### Generated by the OWL API (version 4.2.8.20170104-2310) https://github.com/owlcs/owlapi
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