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branch: master
Commits on Feb 23, 2015
  1. @jairideout

    Merge pull request #142 from jairideout/sourcetracker-0.9.8

    jairideout authored
    MAINT: update to SourceTracker 0.9.8
  2. @jairideout
Commits on Jan 20, 2015
  1. @gregcaporaso

    Merge pull request #141 from jairideout/1.9.0-update

    gregcaporaso authored
    MAINT: rename qiime-dev folder to qiime-1.9.0
  2. @jairideout

    MAINT: rename qiime-dev folder to qiime-1.9.0

    jairideout authored
    Necessary for upcoming QIIME 1.9.0 release.
Commits on Jan 14, 2015
  1. @gregcaporaso

    Merge pull request #140 from jairideout/remove-smr-swarm

    gregcaporaso authored
    MAINT: remove SortMeRNA and swarm
  2. @jairideout

    MAINT: remove sumaclust, flex, and m4

    jairideout authored
    sumaclust will also be installed via QIIME's setup.py.
  3. @jairideout

    MAINT: remove SortMeRNA and swarm

    jairideout authored
    These will be installed via QIIME's setup.py in an upcoming pull request.
Commits on Jan 9, 2015
  1. @gregcaporaso

    Merge pull request #139 from jairideout/issue-109

    gregcaporaso authored
    MAINT: remove pplacer and parsinsert
  2. @jairideout
  3. @gregcaporaso

    Merge pull request #138 from jairideout/gg_removal

    gregcaporaso authored
    MAINT: remove Greengenes and coreset from QIIME conf
  4. @jairideout
Commits on Jan 7, 2015
  1. @gregcaporaso

    Merge pull request #137 from jairideout/seqprep-v1.1-update

    gregcaporaso authored
    Update to use SeqPrep v1.1
  2. @jairideout

    Update to use SeqPrep v1.1

    jairideout authored
    Instead of the latest development version (this doesn't compile on Ubuntu). See jstjohn/SeqPrep#22
Commits on Dec 20, 2014
  1. @jairideout
Commits on Dec 19, 2014
  1. @ekopylova

    update swarm 1.2.7 to 1.2.19

    ekopylova authored
  2. @ekopylova

    updated versions

    ekopylova authored
  3. @ekopylova
  4. @gregcaporaso

    Merge pull request #135 from jairideout/remove-r-packages

    gregcaporaso authored
    Remove R packages; update links to ftp.microbio.me
  5. @jairideout
  6. @ekopylova
Commits on Dec 16, 2014
  1. @gregcaporaso

    fixed gg link

    gregcaporaso authored
  2. @gregcaporaso

    temporarily using dropbox links for ...

    gregcaporaso authored
    ... thebeast/microbio.me downloads while those systems are in transition
Commits on Dec 15, 2014
  1. @gregcaporaso

    updating swarm download link

    gregcaporaso authored
    trying to fix an issue where jenkins fails while trying to get swarm, though we can't reproduce this issue on either Mac OS or Linux
Commits on Dec 13, 2014
  1. @antgonza

    Merge pull request #134 from antgonza/deseq2

    antgonza authored
    adding deseq2
  2. @antgonza

    adding deseq2

    antgonza authored
Commits on Dec 12, 2014
  1. @jairideout

    Merge pull request #133 from antgonza/adding-deseq

    jairideout authored
    adding deseq
  2. @antgonza

    adding deseq

    antgonza authored
Commits on Dec 11, 2014
  1. @antgonza

    Merge pull request #132 from jairideout/remove-r

    antgonza authored
    Remove R from QIIME config
  2. @jairideout

    Remove R from QIIME config

    jairideout authored
  3. @jairideout

    Merge pull request #131 from antgonza/adding-biom

    jairideout authored
    adding biom to R
  4. @antgonza

    adding biom to R

    antgonza authored
  5. @gregcaporaso

    Merge pull request #130 from jairideout/lanemask-removal

    gregcaporaso authored
    Remove lanemask from latest QIIME conf
  6. @jairideout
  7. @antgonza
  8. @antgonza
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